Variant report

Variant	nsv876737
Chromosome Location	chr3:46569721-46595431
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:353)
CpG islands
(count:244)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:353 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:46590494-46591747	K562	blood:	n/a	n/a
2	ATF1	chr3:46590798-46591482	K562	blood:	n/a	n/a
3	ATF2	chr3:46580069-46581156	GM12878	blood:	n/a	n/a
4	ATF2	chr3:46587222-46587794	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr3:46579996-46581139	GM12878	blood:	n/a	n/a
6	ATF2	chr3:46587088-46587898	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF3	chr3:46590796-46591472	K562	blood:	n/a	n/a
8	BATF	chr3:46584175-46584452	GM12878	blood:	n/a	chr3:46584294-46584305
9	BATF	chr3:46580239-46581020	GM12878	blood:	n/a	chr3:46580286-46580294
10	BATF	chr3:46580458-46580983	GM12878	blood:	n/a	n/a
11	BCL11A	chr3:46580181-46581037	GM12878	blood:	n/a	chr3:46580776-46580785 chr3:46580773-46580782
12	BCL11A	chr3:46580232-46580994	GM12878	blood:	n/a	chr3:46580776-46580785 chr3:46580773-46580782
13	BCL3	chr3:46580272-46581013	GM12878	blood:	n/a	chr3:46580776-46580785 chr3:46580773-46580782
14	BCLAF1	chr3:46580193-46581045	GM12878	blood:	n/a	chr3:46580776-46580785 chr3:46580773-46580782
15	BCLAF1	chr3:46580114-46581143	GM12878	blood:	n/a	chr3:46580776-46580785 chr3:46580773-46580782
16	BHLHE40	chr3:46580334-46580739	K562	blood:	n/a	n/a
17	BHLHE40	chr3:46587705-46587803	K562	blood:	n/a	n/a
18	BHLHE40	chr3:46573165-46573169	K562	blood:	n/a	n/a
19	BHLHE40	chr3:46583349-46583693	K562	blood:	n/a	n/a
20	BHLHE40	chr3:46590790-46591657	K562	blood:	n/a	n/a
21	BHLHE40	chr3:46579813-46581460	GM12878	blood:	n/a	n/a
22	BRCA1	chr3:46579204-46579251	H1-hESC	embryonic stem cell:	n/a	n/a
23	BRCA1	chr3:46587466-46587653	H1-hESC	embryonic stem cell:	n/a	n/a
24	BRCA1	chr3:46580595-46580758	GM12878	blood:	n/a	n/a
25	CBX3	chr3:46590722-46591481	K562	blood:	n/a	n/a
26	CBX3	chr3:46590036-46590500	K562	blood:	n/a	n/a
27	CCNT2	chr3:46590809-46591382	K562	blood:	n/a	chr3:46590961-46590981 chr3:46590940-46590949
28	CCNT2	chr3:46578978-46579341	K562	blood:	n/a	n/a
29	CEBPB	chr3:46590553-46591486	K562	blood:	n/a	chr3:46590700-46590712
30	CEBPB	chr3:46580071-46581127	GM12878	blood:	n/a	chr3:46581036-46581049
31	CEBPB	chr3:46590884-46591765	K562	blood:	n/a	n/a
32	CEBPB	chr3:46594430-46595025	IMR90	lung:	n/a	chr3:46594666-46594679
33	CEBPB	chr3:46594470-46594933	HepG2	liver:	n/a	chr3:46594666-46594679
34	CEBPB	chr3:46587363-46587563	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr3:46594494-46594991	Hela-S3	cervix:	n/a	chr3:46594666-46594679
36	CEBPB	chr3:46594556-46594894	K562	blood:	n/a	chr3:46594666-46594679
37	CEBPB	chr3:46591146-46591420	K562	blood:	n/a	n/a
38	CEBPB	chr3:46578296-46578425	K562	blood:	n/a	n/a
39	CEBPB	chr3:46580609-46580962	GM12878	blood:	n/a	n/a
40	CEBPB	chr3:46580242-46580607	GM12878	blood:	n/a	n/a
41	CEBPD	chr3:46590698-46591475	K562	blood:	n/a	n/a
42	CEBPD	chr3:46590694-46591464	K562	blood:	n/a	n/a
43	CHD2	chr3:46587252-46587742	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD2	chr3:46580230-46581369	GM12878	blood:	n/a	n/a
45	CREB1	chr3:46580076-46581149	GM12878	blood:	n/a	n/a
46	CREB1	chr3:46580177-46581094	GM12878	blood:	n/a	n/a
47	CTBP2	chr3:46586789-46587956	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr3:46586693-46586826	NHEK	skin:	n/a	n/a
49	CTCF	chr3:46586600-46586750	SAEC	small airway:	n/a	n/a
50	CTCF	chr3:46578656-46578695	Lung_OC	lung:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:46586284-46586334	HCF	heart:	n/a
2	chr3:46586857-46586907	GM19239	blood:	n/a
3	chr3:46594000-46594050	HEEpiC	esophagus:	n/a
4	chr3:46586857-46586907	AG10803	skin:	n/a
5	chr3:46586284-46586334	HL-60	blood:	n/a
6	chr3:46586284-46586334	K562	blood:	n/a
7	chr3:46594000-46594050	ProgFib	skin:	n/a
8	chr3:46586857-46586907	LNCaP	prostate:	n/a
9	chr3:46586284-46586334	CMK	blood:	n/a
10	chr3:46594000-46594050	HEK293	kidney:	embryo
11	chr3:46579532-46579582	PANC-1	pancreas:	n/a
12	chr3:46594000-46594050	HNPCEpiC	eye:	n/a
13	chr3:46579532-46579582	AG09319	gingival:	n/a
14	chr3:46586284-46586334	HNPCEpiC	eye:	n/a
15	chr3:46594000-46594050	HepG2	liver:	n/a
16	chr3:46586284-46586334	AG04450	lung:	fetal
17	chr3:46579532-46579582	HUVEC	blood vessel:	n/a
18	chr3:46594000-46594050	AG04449	skin:	fetal
19	chr3:46586857-46586907	AG09319	gingival:	n/a
20	chr3:46586284-46586334	LNCaP	prostate:	n/a
21	chr3:46594000-46594050	ovcar-3	ovarian:	n/a
22	chr3:46594000-46594050	PFSK-1	brain:	n/a
23	chr3:46594000-46594050	HRE	kidney:	n/a
24	chr3:46586284-46586334	PrEC	prostate:	n/a
25	chr3:46586284-46586334	HRE	kidney:	n/a
26	chr3:46579532-46579582	HNPCEpiC	eye:	n/a
27	chr3:46579532-46579582	HCM	heart:	n/a
28	chr3:46579532-46579582	HRPEpiC	eye:	n/a
29	chr3:46579532-46579582	SAEC	small airway:	n/a
30	chr3:46579532-46579582	AG04450	lung:	fetal
31	chr3:46594000-46594050	BE2_C	brain:	n/a
32	chr3:46594000-46594050	HIPEpiC	eye:	n/a
33	chr3:46586284-46586334	NH-A	brain:	n/a
34	chr3:46586857-46586907	SK-N-MC	brain:	n/a
35	chr3:46586284-46586334	HUVEC	blood vessel:	n/a
36	chr3:46586284-46586334	BJ	skin:	n/a
37	chr3:46586857-46586907	Jurkat	blood:	n/a
38	chr3:46594000-46594050	PANC-1	pancreas:	n/a
39	chr3:46579532-46579582	IMR90	lung:	fetal
40	chr3:46586284-46586334	Caco-2	colon:	n/a
41	chr3:46594000-46594050	AG09319	gingival:	n/a
42	chr3:46586857-46586907	HUVEC	blood vessel:	n/a
43	chr3:46586857-46586907	ECC-1	luminal epithelium:	n/a
44	chr3:46586857-46586907	AG04449	skin:	fetal
45	chr3:46579532-46579582	HAEpiC	amniotic membrane:	n/a
46	chr3:46594000-46594050	NB4	blood:	n/a
47	chr3:46586857-46586907	HEK293	kidney:	embryo
48	chr3:46594000-46594050	LNCaP	prostate:	n/a
49	chr3:46594000-46594050	HAEpiC	amniotic membrane:	n/a
50	chr3:46586857-46586907	MCF10A-Er-Src	breast:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:46560786..46563399-chr3:46568706..46571436,2	K562	blood:
2	chr3:46574689..46577653-chr3:46585758..46587462,2	K562	blood:
3	chr3:46569161..46571710-chr3:46593876..46596679,2	K562	blood:
4	chr3:46571863..46574043-chr3:46575546..46577430,2	K562	blood:
5	chr3:46582368..46586773-chr3:46586902..46591684,9	K562	blood:
6	chr3:46568691..46571329-chr3:46573292..46576453,3	K562	blood:
7	chr3:46582368..46586773-chr3:46586902..46591684,9	K562	blood:
8	chr3:46574689..46577653-chr3:46585758..46587462,2	K562	blood:
9	chr3:46569161..46571710-chr3:46593876..46596679,2	K562	blood:
10	chr3:46571863..46574043-chr3:46575546..46577430,2	K562	blood:
11	chr3:46575458..46577702-chr3:46584579..46586298,2	K562	blood:
12	chr3:46582873..46586773-chr3:46587066..46590997,5	K562	blood:
13	chr3:46582873..46586773-chr3:46587066..46590997,5	K562	blood:
14	chr3:46565864..46568111-chr3:46586366..46589191,2	K562	blood:
15	chr3:46584242..46586784-chr3:46591194..46593105,2	K562	blood:
16	chr3:46567191..46569704-chr3:46574346..46575998,2	K562	blood:
17	chr3:46584414..46585245-chr3:46599503..46600045,2	K562	blood:
18	chr3:46568691..46571329-chr3:46573292..46576453,3	K562	blood:
19	chr3:46575458..46577702-chr3:46584579..46586298,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000264306	TF binding region
ENSG00000268324	TF binding region
ENSG00000264306	CpG island
ENSG00000268324	CpG island
ENSG00000264306	chromatin interactions

Extended variants
information (count: 995 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:995 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6791703	chr3:46569721-46569722	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs56108516	chr3:46569730-46569731	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs562318611	chr3:46569753-46569754	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs10706448	chr3:46569784-46569785	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs79411190	chr3:46569797-46569798	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs62247800	chr3:46569799-46569800	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368383872	chr3:46569810-46569811	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs139709988	chr3:46569873-46569874	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs201111355	chr3:46569900-46569901	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs560186315	chr3:46569923-46569924	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs9827559	chr3:46569977-46569978	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs549116058	chr3:46569985-46569986	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs561153421	chr3:46569997-46569998	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs34595299	chr3:46570011-46570012	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs535037854	chr3:46570074-46570075	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs183614992	chr3:46570148-46570149	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs188262482	chr3:46570151-46570152	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs571873013	chr3:46570239-46570240	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs9848284	chr3:46570381-46570382	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs547513643	chr3:46570391-46570392	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs575902419	chr3:46570404-46570405	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs149845556	chr3:46570409-46570410	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs192764652	chr3:46570530-46570531	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs112739273	chr3:46570564-46570565	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs527959377	chr3:46570572-46570573	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs182247406	chr3:46570593-46570594	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140594883	chr3:46570605-46570606	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs75314069	chr3:46570606-46570607	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs144864257	chr3:46570681-46570682	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs577902938	chr3:46570738-46570739	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs554901574	chr3:46570747-46570748	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs559899152	chr3:46570812-46570813	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs12492797	chr3:46570852-46570853	Weak transcription Enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs118120660	chr3:46570877-46570878	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs561116611	chr3:46570892-46570893	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs531766354	chr3:46570916-46570917	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs550140900	chr3:46570923-46570924	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs76326019	chr3:46570986-46570987	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs532739923	chr3:46571022-46571023	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs4683243	chr3:46571140-46571141	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs566095395	chr3:46571143-46571144	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs536716623	chr3:46571161-46571162	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs559389809	chr3:46571172-46571173	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs548681085	chr3:46571194-46571195	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs533396533	chr3:46571250-46571251	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs139683119	chr3:46571296-46571297	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs545563021	chr3:46571311-46571312	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs370736960	chr3:46571349-46571350	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs375133074	chr3:46571378-46571379	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs377019849	chr3:46571387-46571388	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Lynch syndrome	18415027	CNVD
Renal cell carcinoma	18592004	CNVD
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Kartagener syndrome	16639409	CNVD
Biliary cancer	19435499	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Breast cancer	21509527	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute myeloid leukemia	17268525	CNVD
Salivary gland tumor	18059337	CNVD
Gastric cancer	16891809	CNVD
Night blindness	17160897	CNVD
Cancer	17160897	CNVD
Breast cancer	20409316	CNVD
Lung cancer	17297452	CNVD
Multiple myeloma	16616336	CNVD
Effusion lymphoma	18079361	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	21045282	CNVD
Urothelial cell carcinoma	18451213	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Melanoma	17363583	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Adrenocortical carcinoma	18281524	CNVD

Chromatin state (count:660 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:46541000-46580200	Weak transcription	Fetal Heart	heart
2	chr3:46544800-46599400	Weak transcription	Right Atrium	heart
3	chr3:46549200-46585400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr3:46549400-46579000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr3:46549600-46578600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr3:46556400-46591000	Weak transcription	Psoas Muscle	Psoas
7	chr3:46557800-46578400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr3:46558000-46571400	Strong transcription	Skeletal Muscle Female	skeletal muscle
9	chr3:46558400-46591000	Weak transcription	Gastric	stomach
10	chr3:46559000-46580000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr3:46559400-46578000	Weak transcription	HSMMtube	muscle
12	chr3:46559600-46573000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr3:46559800-46580400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr3:46560200-46574600	Strong transcription	Skeletal Muscle Male	skeletal muscle
15	chr3:46562400-46578800	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr3:46562600-46570200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr3:46562600-46572600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr3:46562600-46578400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr3:46566200-46577600	Weak transcription	Fetal Thymus	thymus
20	chr3:46567200-46586000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr3:46567800-46569800	Strong transcription	Muscle Satellite Cultured Cells	--
22	chr3:46567800-46574000	Strong transcription	Ovary	ovary
23	chr3:46567800-46574400	Strong transcription	Left Ventricle	heart
24	chr3:46568000-46571000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr3:46568000-46578600	Weak transcription	Spleen	Spleen
26	chr3:46568400-46572800	Weak transcription	K562	blood
27	chr3:46568800-46571200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr3:46568800-46571200	Weak transcription	Fetal Stomach	stomach
29	chr3:46568800-46572600	Weak transcription	HMEC	breast
30	chr3:46568800-46578000	Weak transcription	Primary T cells from cord blood	blood
31	chr3:46569000-46570600	Weak transcription	NHEK	skin
32	chr3:46569000-46572800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr3:46569000-46572800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr3:46569000-46577800	Weak transcription	Right Ventricle	heart
35	chr3:46569000-46578800	Weak transcription	Liver	Liver
36	chr3:46569000-46584200	Weak transcription	Fetal Muscle Trunk	muscle
37	chr3:46569200-46578400	Weak transcription	NHDF-Ad	bronchial
38	chr3:46569600-46580200	Weak transcription	Fetal Muscle Leg	muscle
39	chr3:46569800-46577400	Weak transcription	Muscle Satellite Cultured Cells	--
40	chr3:46570200-46570400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr3:46570400-46570800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr3:46570600-46573200	Enhancers	NHEK	skin
43	chr3:46570800-46571400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr3:46571000-46583800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr3:46571200-46571600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr3:46571400-46572800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr3:46571400-46572800	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr3:46571600-46572800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr3:46571600-46578400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
50	chr3:46571600-46587000	Weak transcription	Brain Inferior Temporal Lobe	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links