Variant report

Variant	nsv876798
Chromosome Location	chr3:52856609-52863133
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:104)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:104 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr3:52861867-52862005	H1-hESC	embryonic stem cell:	n/a	n/a
2	BHLHE40	chr3:52861598-52862148	HepG2	liver:	n/a	n/a
3	BRCA1	chr3:52861835-52862052	HepG2	liver:	n/a	n/a
4	CEBPB	chr3:52858268-52858360	K562	blood:	n/a	chr3:52858308-52858319
5	CEBPB	chr3:52858224-52858408	IMR90	lung:	n/a	chr3:52858308-52858319
6	CEBPB	chr3:52858169-52858472	HepG2	liver:	n/a	chr3:52858308-52858319
7	CTCF	chr3:52861800-52861950	HFF-Myc	foreskin:	n/a	n/a
8	CTCF	chr3:52861899-52862020	Hela-S3	cervix:	n/a	n/a
9	CTCF	chr3:52861880-52862030	HCPEpiC	choroid plexus:	n/a	n/a
10	CTCF	chr3:52861930-52862033	GM19239	blood:	n/a	n/a
11	CTCF	chr3:52861680-52861830	NHLF	lung:	n/a	n/a
12	CTCF	chr3:52861602-52862309	A549	lung:	n/a	n/a
13	CTCF	chr3:52861820-52861970	HFF	foreskin:	n/a	n/a
14	CTCF	chr3:52861840-52861990	GM12873	blood:	n/a	n/a
15	CTCF	chr3:52861780-52861930	NHDF-neo	bronchial:	n/a	n/a
16	CTCF	chr3:52861920-52862070	HRPEpiC	eye:	n/a	n/a
17	CTCF	chr3:52861920-52862070	K562	blood:	n/a	n/a
18	CTCF	chr3:52861860-52862010	RPTEC	kidney:	n/a	n/a
19	CTCF	chr3:52861900-52862050	HRE	kidney:	n/a	n/a
20	CTCF	chr3:52861880-52862030	HRE	kidney:	n/a	n/a
21	CTCF	chr3:52861960-52862110	Hela-S3	cervix:	n/a	n/a
22	CTCF	chr3:52861900-52862050	AG10803	skin:	n/a	n/a
23	CTCF	chr3:52861940-52862090	HCPEpiC	choroid plexus:	n/a	n/a
24	CTCF	chr3:52861880-52862030	HBMEC	blood vessel:	n/a	n/a
25	CTCF	chr3:52862997-52862998	GM10248	blood:	n/a	n/a
26	CTCF	chr3:52861900-52862050	WERI-Rb-1	eye:	n/a	n/a
27	CTCF	chr3:52861930-52862024	MCF-7	breast:	n/a	n/a
28	CTCF	chr3:52861840-52861990	A549	lung:	n/a	n/a
29	CTCF	chr3:52861860-52862010	HMEC	breast:	n/a	n/a
30	CTCF	chr3:52861900-52862050	HBMEC	blood vessel:	n/a	n/a
31	CTCF	chr3:52861891-52862068	A549	lung:	n/a	n/a
32	CTCF	chr3:52861800-52861950	A549	lung:	n/a	n/a
33	CTCF	chr3:52861924-52862007	MCF-7	breast:	n/a	n/a
34	CTCF	chr3:52861860-52862010	SK-N-SH_RA	brain:	n/a	n/a
35	CTCF	chr3:52861858-52862062	HepG2	liver:	n/a	n/a
36	CTCF	chr3:52861880-52862030	HPAF	blood vessel:	n/a	n/a
37	CTCF	chr3:52861865-52862068	H1-hESC	embryonic stem cell:	n/a	n/a
38	CTCF	chr3:52861940-52862090	WI-38	lung:	n/a	n/a
39	CTCF	chr3:52861900-52862050	Caco-2	colon:	n/a	n/a
40	CTCF	chr3:52861778-52862114	HepG2	liver:	n/a	n/a
41	CTCF	chr3:52861840-52861990	GM12869	blood:	n/a	n/a
42	CTCF	chr3:52861715-52862167	H1-hESC	embryonic stem cell:	n/a	n/a
43	CTCF	chr3:52861900-52862050	NB4	blood:	n/a	n/a
44	CTCF	chr3:52861878-52862051	K562	blood:	n/a	n/a
45	CTCF	chr3:52861934-52861990	A549	lung:	n/a	n/a
46	CTCF	chr3:52861800-52861950	RPTEC	kidney:	n/a	n/a
47	CTCF	chr3:52861860-52862010	Caco-2	colon:	n/a	n/a
48	CTCF	chr3:52861672-52862120	HepG2	liver:	n/a	n/a
49	CTCF	chr3:52861976-52861981	GM12891	blood:	n/a	n/a
50	CTCF	chr3:52861928-52862016	NHEK	skin:	n/a	n/a

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:52859743..52862109-chr3:52863233..52865763,2	K562	blood:
2	chr3:52857160..52859270-chr3:52860269..52862799,2	K562	blood:
3	chr3:52834279..52837211-chr3:52858122..52860407,2	K562	blood:
4	chr3:52857160..52859270-chr3:52860269..52862799,2	K562	blood:
5	chr3:52860455..52862109-chr3:52862343..52864733,2	K562	blood:
6	chr3:52861566..52862446-chr3:52879879..52880402,2	MCF-7	breast:
7	chr3:52860455..52862109-chr3:52862343..52864733,2	K562	blood:
8	chr3:52804845..52806455-chr3:52854968..52857676,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ITIH3-1	chr3:52858128-52858353	ENSG00000239799.1
2	lnc-TMEM110-MUSTN1-3	chr3:52857351-52857722	NONHSAT089965
3	lnc-ITIH3-1	chr3:52859221-52859330	ENSG00000239799.1
4	lnc-ITIH3-1	chr3:52857951-52858009	ENSG00000239799.1

No data

Variant related genes	Relation type
ITIH4-AS1	TF binding region
ITIH4	TF binding region
ENSG00000114904	chromatin interactions
ENSG00000239799	chromatin interactions
ENSG00000162267	chromatin interactions
ENSG00000055955	chromatin interactions

Extended variants
information (count: 319 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2710317	chr3:52856609-52856610	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs568278151	chr3:52856633-52856634	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs548710461	chr3:52856640-52856641	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs150719658	chr3:52856664-52856665	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs185732450	chr3:52856704-52856705	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs118013309	chr3:52856727-52856728	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs139077571	chr3:52856761-52856762	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs528084406	chr3:52856772-52856773	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs2535641	chr3:52856780-52856781	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs74788991	chr3:52856803-52856804	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs574115631	chr3:52856849-52856850	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs566816625	chr3:52856860-52856861	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs149487781	chr3:52856952-52856953	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs556699543	chr3:52856991-52856992	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs146359416	chr3:52857027-52857028	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs545288521	chr3:52857028-52857029	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs2535639	chr3:52857090-52857091	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs56251734	chr3:52857152-52857153	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs541747327	chr3:52857208-52857209	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs561415810	chr3:52857210-52857211	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs528901157	chr3:52857236-52857237	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs548522148	chr3:52857258-52857259	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs568617686	chr3:52857350-52857351	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs190539233	chr3:52857380-52857381	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
25	rs549933786	chr3:52857406-52857407	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
26	rs551308550	chr3:52857419-52857420	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
27	rs111743679	chr3:52857491-52857492	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
28	rs377128346	chr3:52857547-52857548	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	Overlapped CNVs	n/a
29	rs200127380	chr3:52857559-52857560	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
30	rs143002894	chr3:52857599-52857600	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
31	rs141191778	chr3:52857610-52857611	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
32	rs199688247	chr3:52857612-52857613	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
33	rs370415481	chr3:52857613-52857614	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
34	rs369940396	chr3:52857620-52857621	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
35	rs373908509	chr3:52857622-52857623	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
36	rs78202828	chr3:52857625-52857626	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
37	rs139219181	chr3:52857651-52857652	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
38	rs150902707	chr3:52857664-52857665	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	4 gene(s)	Overlapped CNVs	n/a
39	rs368163088	chr3:52857685-52857686	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
40	rs201445354	chr3:52857691-52857692	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
41	rs144505163	chr3:52857692-52857693	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region lncRNA	3 gene(s)	Overlapped CNVs	n/a
42	rs368475731	chr3:52857725-52857726	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs202162656	chr3:52857766-52857767	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs202144150	chr3:52857770-52857771	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs34860124	chr3:52857778-52857779	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs200977741	chr3:52857788-52857789	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs112723318	chr3:52857805-52857806	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs558770202	chr3:52857814-52857815	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs146165649	chr3:52857828-52857829	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs111809407	chr3:52857836-52857837	Weak transcription Strong transcription Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Urothelial carcinoma	18382360	CNVD
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	16397240	CNVD
Breast cancer	22032731	CNVD
Non-small cell lung cancer	20864512	CNVD
Colorectal cancer	16912164	CNVD
Non-small cell lung cancer	19010865	CNVD
Colorectal cancer	16272173	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Septo-optic dysplasia	21572526	CNVD
Biliary cancer	19435499	CNVD
Squamous cell cancer	20885788	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Ventriculomegaly	21325761	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Lung cancer	16618734	CNVD
Neuroblastoma	19686582	CNVD
Renal cell carcinoma	18765545	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:180 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:52844400-52857200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr3:52844600-52856800	Weak transcription	Fetal Intestine Small	intestine
3	chr3:52844600-52857600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr3:52846400-52860800	Weak transcription	Esophagus	oesophagus
5	chr3:52846800-52857000	Weak transcription	Aorta	Aorta
6	chr3:52847000-52857400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr3:52847200-52861200	Genic enhancers	Liver	Liver
8	chr3:52847400-52857000	Weak transcription	Brain Hippocampus Middle	brain
9	chr3:52847600-52865000	Weak transcription	Psoas Muscle	Psoas
10	chr3:52848400-52865800	Weak transcription	Ovary	ovary
11	chr3:52850200-52868400	Weak transcription	Colonic Mucosa	Colon
12	chr3:52850600-52857800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr3:52850600-52864200	Strong transcription	Stomach Smooth Muscle	stomach
14	chr3:52850800-52865400	Strong transcription	Fetal Stomach	stomach
15	chr3:52851000-52856800	Weak transcription	Fetal Brain Female	brain
16	chr3:52851600-52863400	Strong transcription	Breast Myoepithelial Primary Cells	Breast
17	chr3:52851800-52856800	Weak transcription	Lung	lung
18	chr3:52851800-52858000	Weak transcription	Placenta	Placenta
19	chr3:52852200-52869200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr3:52852800-52869200	Weak transcription	Primary B cells from cord blood	blood
21	chr3:52853000-52857000	Weak transcription	Gastric	stomach
22	chr3:52853000-52857000	Enhancers	HepG2	liver
23	chr3:52853000-52857000	Weak transcription	Monocytes-CD14+_RO01746	blood
24	chr3:52853000-52858400	Strong transcription	Brain Angular Gyrus	brain
25	chr3:52853000-52868000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
26	chr3:52853200-52859400	Strong transcription	Thymus	Thymus
27	chr3:52853400-52857600	Strong transcription	Spleen	Spleen
28	chr3:52853400-52861200	Strong transcription	Fetal Muscle Leg	muscle
29	chr3:52854000-52858800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr3:52854000-52859000	Strong transcription	Primary neutrophils fromperipheralblood	blood
31	chr3:52854000-52861200	Strong transcription	Pancreas	Pancrea
32	chr3:52854200-52859000	Strong transcription	Brain Cingulate Gyrus	brain
33	chr3:52854200-52874200	Weak transcription	H9 Cell Line	embryonic stem cell
34	chr3:52854400-52856800	Weak transcription	Brain Germinal Matrix	brain
35	chr3:52854400-52861600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr3:52854600-52857400	Weak transcription	Primary T cells fromperipheralblood	blood
37	chr3:52854800-52869200	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr3:52854800-52888400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr3:52855000-52861600	Strong transcription	Skeletal Muscle Female	skeletal muscle
40	chr3:52855200-52860800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
41	chr3:52855200-52865400	Weak transcription	Brain Substantia Nigra	brain
42	chr3:52855400-52857000	Weak transcription	Primary monocytes fromperipheralblood	blood
43	chr3:52855600-52857200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
44	chr3:52855600-52857200	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr3:52855600-52862000	Strong transcription	Skeletal Muscle Male	skeletal muscle
46	chr3:52855600-52865400	Weak transcription	Colon Smooth Muscle	Colon
47	chr3:52855800-52857400	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr3:52855800-52858200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr3:52856000-52856800	Weak transcription	Fetal Thymus	thymus
50	chr3:52856000-52865400	Weak transcription	Rectal Smooth Muscle	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links