Variant report

Variant	nsv877092
Chromosome Location	chr3:84889597-84959077
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:102)
CpG islands
(count:184)
Chromatin interactive
region (count:0)
LncRNA
region (count:35)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:102 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr3:84954233-84954576	HepG2	liver:	n/a	n/a
2	CEBPB	chr3:84958863-84959065	A549	lung:	n/a	chr3:84958954-84958965
3	CEBPB	chr3:84930983-84931198	A549	lung:	n/a	n/a
4	CEBPB	chr3:84958813-84959139	HepG2	liver:	n/a	chr3:84958954-84958965
5	CEBPB	chr3:84930981-84931137	H1-hESC	embryonic stem cell:	n/a	n/a
6	CTCF	chr3:84934950-84934956	LNCaP	prostate:	n/a	n/a
7	CTCF	chr3:84920920-84921070	MCF-7	breast:	n/a	chr3:84921010-84921028
8	CTCF	chr3:84950240-84950390	HUVEC	blood vessel:	n/a	n/a
9	CTCF	chr3:84950160-84950310	GM12867	blood:	n/a	n/a
10	CTCF	chr3:84929620-84929667	Spleen_OC	spleen:	n/a	n/a
11	CTCF	chr3:84923877-84923947	Lung_OC	lung:	n/a	n/a
12	CTCF	chr3:84957003-84957054	GM13977	blood:	n/a	n/a
13	CTCF	chr3:84901608-84901641	GM20000	blood:	n/a	n/a
14	E2F4	chr3:84906725-84906921	MCF10A-Er-Src	breast:	n/a	n/a
15	E2F4	chr3:84942003-84942163	MCF10A-Er-Src	breast:	n/a	n/a
16	FOS	chr3:84913207-84913418	MCF10A-Er-Src	breast:	n/a	n/a
17	FOS	chr3:84904406-84904606	MCF10A-Er-Src	breast:	n/a	n/a
18	FOS	chr3:84913150-84913326	MCF10A-Er-Src	breast:	n/a	n/a
19	FOS	chr3:84904319-84904572	MCF10A-Er-Src	breast:	n/a	n/a
20	FOXA1	chr3:84934418-84934675	T-47D	breast:	n/a	n/a
21	FOXA1	chr3:84942280-84942716	T-47D	breast:	n/a	n/a
22	FOXA1	chr3:84942336-84942612	T-47D	breast:	n/a	n/a
23	FOXA1	chr3:84934404-84934722	T-47D	breast:	n/a	n/a
24	FOXA1	chr3:84943756-84944012	T-47D	breast:	n/a	n/a
25	FOXA1	chr3:84943708-84944084	T-47D	breast:	n/a	n/a
26	GATA3	chr3:84942231-84942744	T-47D	breast:	n/a	chr3:84942340-84942350
27	GATA3	chr3:84945858-84946175	T-47D	breast:	n/a	n/a
28	GATA3	chr3:84945849-84946149	T-47D	breast:	n/a	n/a
29	GATA3	chr3:84927890-84928248	SH-SY5Y	brain:	n/a	n/a
30	GATA3	chr3:84942290-84942748	T-47D	breast:	n/a	chr3:84942340-84942350
31	GATA3	chr3:84943614-84944114	T-47D	breast:	n/a	n/a
32	GATA3	chr3:84941026-84941169	SH-SY5Y	brain:	n/a	chr3:84941145-84941155 chr3:84941146-84941153 chr3:84941146-84941153 chr3:84941146-84941153
33	GATA3	chr3:84943690-84944127	T-47D	breast:	n/a	n/a
34	GATA3	chr3:84943744-84944001	SH-SY5Y	brain:	n/a	n/a
35	JUND	chr3:84908481-84908494	H1-hESC	embryonic stem cell:	n/a	n/a
36	JUND	chr3:84911039-84911126	H1-hESC	embryonic stem cell:	n/a	n/a
37	JUND	chr3:84920931-84920961	H1-hESC	embryonic stem cell:	n/a	n/a
38	MAFK	chr3:84952074-84952262	HepG2	liver:	n/a	chr3:84952232-84952247
39	MAFK	chr3:84903523-84903654	HepG2	liver:	n/a	chr3:84903604-84903620 chr3:84903604-84903619 chr3:84903603-84903617 chr3:84903605-84903616 chr3:84903604-84903615 chr3:84903604-84903615
40	MAFK	chr3:84932964-84933136	HepG2	liver:	n/a	chr3:84933069-84933085 chr3:84933070-84933084 chr3:84933072-84933088 chr3:84933067-84933087
41	MAFK	chr3:84903494-84903719	HepG2	liver:	n/a	chr3:84903604-84903620 chr3:84903604-84903619 chr3:84903603-84903617 chr3:84903605-84903616 chr3:84903604-84903615 chr3:84903604-84903615
42	MAFK	chr3:84917855-84918030	HepG2	liver:	n/a	n/a
43	MAFK	chr3:84951991-84952306	HepG2	liver:	n/a	chr3:84952232-84952247
44	MAFK	chr3:84902042-84902193	HepG2	liver:	n/a	n/a
45	MYC	chr3:84919105-84919211	MCF10A-Er-Src	breast:	n/a	n/a
46	MYC	chr3:84954337-84954511	MCF-7	breast:	n/a	n/a
47	MYC	chr3:84931757-84931903	H1-hESC	embryonic stem cell:	n/a	n/a
48	POLR2A	chr3:84954260-84954262	Gliobla	brain:	n/a	n/a
49	POLR2A	chr3:84900177-84900309	MCF10A-Er-Src	breast:	n/a	n/a
50	POLR2A	chr3:84954156-84954217	A549	lung:	n/a	n/a

(count:184 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:84919438-84919488	GM12878	blood:	n/a
2	chr3:84919438-84919488	GM12878	blood:	n/a
3	chr3:84919438-84919488	T-47D	breast:	n/a
4	chr3:84919438-84919488	H1-hESC	embryonic stem cell:	embryo
5	chr3:84919438-84919488	HIPEpiC	eye:	n/a
6	chr3:84909261-84909311	SKMC	muscle:	n/a
7	chr3:84909261-84909311	AoSMC	blood vessel:	n/a
8	chr3:84909261-84909311	HMEC	breast:	n/a
9	chr3:84909261-84909311	IMR90	lung:	fetal
10	chr3:84919226-84919276	AoSMC	blood vessel:	n/a
11	chr3:84919226-84919276	SK-N-MC	brain:	n/a
12	chr3:84919438-84919488	AoSMC	blood vessel:	n/a
13	chr3:84909261-84909311	HPAEpiC	pulmonary alveolar:	n/a
14	chr3:84919226-84919276	AG09309	skin:	n/a
15	chr3:84909261-84909311	HRPEpiC	eye:	n/a
16	chr3:84919438-84919488	ECC-1	luminal epithelium:	n/a
17	chr3:84919438-84919488	U87	brain:	n/a
18	chr3:84919226-84919276	AG04449	skin:	fetal
19	chr3:84919438-84919488	AG04450	lung:	fetal
20	chr3:84919438-84919488	ProgFib	skin:	n/a
21	chr3:84909261-84909311	HEEpiC	esophagus:	n/a
22	chr3:84909261-84909311	HAEpiC	amniotic membrane:	n/a
23	chr3:84919226-84919276	HEEpiC	esophagus:	n/a
24	chr3:84909261-84909311	Hepatocyte	liver:	n/a
25	chr3:84909261-84909311	HepG2	liver:	n/a
26	chr3:84919438-84919488	Hepatocyte	liver:	n/a
27	chr3:84919226-84919276	GM12878	blood:	n/a
28	chr3:84919226-84919276	K562	blood:	n/a
29	chr3:84919438-84919488	GM12891	blood:	n/a
30	chr3:84919226-84919276	AG10803	skin:	n/a
31	chr3:84919438-84919488	AG09319	gingival:	n/a
32	chr3:84909261-84909311	PFSK-1	brain:	n/a
33	chr3:84919226-84919276	Jurkat	blood:	n/a
34	chr3:84919226-84919276	U87	brain:	n/a
35	chr3:84919226-84919276	NHBE	bronchial:	n/a
36	chr3:84919226-84919276	NH-A	brain:	n/a
37	chr3:84919438-84919488	NHBE	bronchial:	n/a
38	chr3:84919438-84919488	BE2_C	brain:	n/a
39	chr3:84919438-84919488	SK-N-SH_RA	brain:	n/a
40	chr3:84919438-84919488	IMR90	lung:	fetal
41	chr3:84919226-84919276	HUVEC	blood vessel:	n/a
42	chr3:84909261-84909311	MCF10A-Er-Src	breast:	n/a
43	chr3:84919438-84919488	AG04449	skin:	fetal
44	chr3:84919226-84919276	ovcar-3	ovarian:	n/a
45	chr3:84919438-84919488	NH-A	brain:	n/a
46	chr3:84919226-84919276	HRCEpiC	kidney:	n/a
47	chr3:84919226-84919276	LNCaP	prostate:	n/a
48	chr3:84919226-84919276	GM06990	blood:	n/a
49	chr3:84909261-84909311	GM19239	blood:	n/a
50	chr3:84919438-84919488	Jurkat	blood:	n/a

No data

(count:35 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VGLL3-6	chr3:84917749-84917819	NONHSAT090649
2	lnc-VGLL3-6	chr3:84918429-84918726	ENSG00000242641.1
3	lnc-VGLL3-6	chr3:84903093-84903166	ENSG00000242641.1
4	lnc-CADM2-1	chr3:84934087-84934274	XLOC_002723
5	lnc-VGLL3-6	chr3:84908966-84909074	ENSG00000242641.1
6	lnc-VGLL3-6	chr3:84917749-84917819	ENSG00000242641.1
7	lnc-VGLL3-6	chr3:84912857-84913156	ENSG00000242641.1
8	lnc-VGLL3-6	chr3:84912367-84912587	ENSG00000242641.1
9	lnc-VGLL3-6	chr3:84918742-84918779	ENSG00000242641.1
10	lnc-CADM2-1	chr3:84942393-84942530	XLOC_002723
11	lnc-CADM2-1	chr3:84942083-84942116	XLOC_002723
12	lnc-VGLL3-6	chr3:84912857-84913156	NONHSAT090649
13	lnc-VGLL3-6	chr3:84918054-84918175	ENSG00000242641.1
14	lnc-VGLL3-6	chr3:84918054-84918175	ENSG00000242641.1
15	lnc-VGLL3-6	chr3:84918054-84918175	NONHSAT090649
16	lnc-VGLL3-6	chr3:84903093-84903166	NONHSAT090649
17	lnc-VGLL3-6	chr3:84917933-84917994	ENSG00000242641.1
18	lnc-CADM2-1	chr3:84942392-84942530	NONHSAT090654
19	lnc-VGLL3-6	chr3:84917749-84917819	ENSG00000242641.1
20	lnc-CADM2-1	chr3:84942082-84942116	NONHSAT090654
21	lnc-VGLL3-9	chr3:84924009-84924132	ucscGeneNc_uc003dqi_2
22	lnc-VGLL3-6	chr3:84918429-84918726	NONHSAT090649
23	lnc-VGLL3-6	chr3:84908966-84909074	NONHSAT090649
24	lnc-VGLL3-6	chr3:84911874-84911972	ENSG00000242641.1
25	lnc-VGLL3-6	chr3:84918054-84918175	NONHSAT090652
26	lnc-VGLL3-6	chr3:84930640-84930830	ENSG00000242641.1
27	lnc-VGLL3-6	chr3:84911874-84911972	NONHSAT090649
28	lnc-VGLL3-6	chr3:84917279-84917406	ENSG00000242641.1
29	lnc-VGLL3-9	chr3:84921479-84921613	ucscGeneNc_uc003dqi_2
30	lnc-VGLL3-6	chr3:84917749-84917819	ENSG00000242641.1
31	lnc-VGLL3-6	chr3:84917749-84917819	NONHSAT090652
32	lnc-VGLL3-6	chr3:84912387-84912587	NONHSAT090652
33	lnc-VGLL3-6	chr3:84918429-84918637	NONHSAT090652
34	lnc-VGLL3-6	chr3:84912367-84912587	NONHSAT090649
35	lnc-CADM2-1	chr3:84934086-84934274	NONHSAT090654

No data

Variant related genes	Relation type
ENSG00000266025	TF binding region
ENSG00000242339	TF binding region
LINC00971	TF binding region
ENSG00000266025	CpG island
ENSG00000242339	CpG island
LINC00971	CpG island
YES1	miRNA target sites
THAP6	miRNA target sites
TCEAL1	miRNA target sites

Extended variants
information (count: 711 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:711 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1146751	chr3:84889597-84889598	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs528179290	chr3:84889598-84889599	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs537321626	chr3:84889616-84889617	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs546764503	chr3:84889651-84889652	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs371929647	chr3:84889663-84889664	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs532179970	chr3:84889689-84889690	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs547010779	chr3:84889697-84889698	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs567168142	chr3:84889725-84889726	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs550613648	chr3:84889756-84889757	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs1248851	chr3:84889774-84889775	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs536161697	chr3:84889809-84889810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs80316990	chr3:84889840-84889841	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs566594189	chr3:84889913-84889914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs534004333	chr3:84889916-84889917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs558659235	chr3:84889987-84889988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs79336725	chr3:84890017-84890018	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs181792566	chr3:84890046-84890047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs145397818	chr3:84890075-84890076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs559591632	chr3:84890101-84890102	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs34964881	chr3:84890106-84890107	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs369411079	chr3:84890107-84890108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs397796216	chr3:84890110-84890111	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs575035563	chr3:84890141-84890142	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs542198577	chr3:84890168-84890169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs185738999	chr3:84890178-84890179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs116354811	chr3:84890210-84890211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs540315760	chr3:84890219-84890220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs189230641	chr3:84890275-84890276	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs532268905	chr3:84890279-84890280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs114834595	chr3:84890291-84890292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs568870920	chr3:84890296-84890297	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs562356941	chr3:84890331-84890332	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529994842	chr3:84890347-84890348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs372174619	chr3:84890392-84890393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs180960065	chr3:84890424-84890425	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs184936184	chr3:84890500-84890501	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs527447584	chr3:84890506-84890507	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs551973823	chr3:84890522-84890523	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs570563729	chr3:84890581-84890582	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs537957301	chr3:84890609-84890610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs556511381	chr3:84890623-84890624	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs115725351	chr3:84890670-84890671	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs376765757	chr3:84890694-84890695	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs536126186	chr3:84890700-84890701	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs72913469	chr3:84890717-84890718	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs188623887	chr3:84890726-84890727	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs537990003	chr3:84890803-84890804	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs142335256	chr3:84890822-84890823	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs537702702	chr3:84890884-84890885	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs535927233	chr3:84890885-84890886	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Acute myeloid leukemia	20729466	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neurodevelopmental disorder	22521361	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Mental retardation	17124404	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
craniofacial dysmorphism	21918468	CNVD
Schizophrenia	23813976	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Autism	22102821	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:84886200-84890600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr3:84886800-84890600	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr3:84886800-84890600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr3:84886800-84891000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr3:84886800-84891000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr3:84886800-84891000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
7	chr3:84886800-84891200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr3:84887200-84890400	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr3:84889200-84889600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr3:84889600-84889800	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr3:84889800-84890800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr3:84890400-84891200	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr3:84890600-84891400	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr3:84890600-84891400	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr3:84890600-84892200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr3:84890800-84891400	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr3:84891000-84891200	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr3:84891000-84891400	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr3:84891000-84891400	Enhancers	H9 Cell Line	embryonic stem cell
20	chr3:84891200-84891600	Enhancers	H1 Cell Line	embryonic stem cell
21	chr3:84896000-84896400	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr3:84896600-84899000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
23	chr3:84898000-84898800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
24	chr3:84898200-84898600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr3:84907600-84907800	Enhancers	H1 Cell Line	embryonic stem cell
26	chr3:84907800-84909000	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr3:84908000-84908800	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr3:84908200-84908800	Enhancers	iPS-18 Cell Line	embryonic stem cell
29	chr3:84908600-84908800	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr3:84908600-84909200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
31	chr3:84908800-84910200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
32	chr3:84908800-84911000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chr3:84909000-84911000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr3:84909200-84910200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
35	chr3:84910200-84910400	Enhancers	iPS-18 Cell Line	embryonic stem cell
36	chr3:84910200-84910400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
37	chr3:84910400-84910800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
38	chr3:84910400-84910800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr3:84910400-84911000	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr3:84910800-84911600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr3:84910800-84912000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
42	chr3:84910800-84912400	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr3:84911000-84911200	Enhancers	H1 Cell Line	embryonic stem cell
44	chr3:84911000-84911800	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr3:84911000-84911800	Enhancers	iPS-20b Cell Line	embryonic stem cell
46	chr3:84911000-84912000	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr3:84911200-84912400	Weak transcription	H1 Cell Line	embryonic stem cell
48	chr3:84912400-84913000	Enhancers	H1 Cell Line	embryonic stem cell
49	chr3:84926200-84926800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr3:84926400-84926800	Enhancers	Placenta Amnion	Placenta Amnion

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links