Variant report

Variant nsv877139
Chromosome Location chr3:87600636-87766543
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:87600800-87601000 Enhancers Pancreatic Islets Pancreatic Islet
2 chr3:87601200-87602600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:87602200-87602800 Enhancers Rectal Mucosa Donor 31 rectum
4 chr3:87602400-87603000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:87602600-87603600 Enhancers Pancreatic Islets Pancreatic Islet
6 chr3:87603000-87603200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr3:87603200-87608000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr3:87608000-87608600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr3:87612800-87613200 Active TSS A549 lung
10 chr3:87613200-87613400 Weak transcription A549 lung
11 chr3:87613400-87614000 Enhancers A549 lung
12 chr3:87623600-87623800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr3:87624400-87624600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr3:87624600-87625000 Enhancers Fetal Muscle Leg muscle
15 chr3:87624800-87625200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr3:87624800-87625400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr3:87636000-87636600 Active TSS Fetal Heart heart
18 chr3:87645400-87646200 Enhancers Rectal Mucosa Donor 31 rectum
19 chr3:87646000-87646400 Enhancers Sigmoid Colon Sigmoid Colon
20 chr3:87646200-87648000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr3:87648000-87648600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr3:87649400-87650200 Enhancers Hela-S3 cervix
23 chr3:87655600-87656600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
24 chr3:87657000-87657800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
25 chr3:87662000-87664400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr3:87664200-87664600 Active TSS ES-WA7 Cell Line embryonic stem cell
27 chr3:87664400-87664800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
28 chr3:87664400-87665000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr3:87664600-87664800 Enhancers ES-WA7 Cell Line embryonic stem cell
30 chr3:87664800-87665200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr3:87664800-87669800 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr3:87666800-87667000 Bivalent Enhancer Esophagus oesophagus
33 chr3:87675000-87676000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:87675600-87676400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:87675600-87677200 Enhancers K562 blood
36 chr3:87676400-87677000 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr3:87676600-87677200 Enhancers HUES6 Cell Line embryonic stem cell
38 chr3:87683000-87683200 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
39 chr3:87683000-87683400 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
40 chr3:87683200-87683400 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
41 chr3:87686600-87687600 Enhancers HUES64 Cell Line embryonic stem cell
42 chr3:87686800-87687400 Enhancers iPS-18 Cell Line embryonic stem cell
43 chr3:87686800-87687400 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr3:87686800-87687600 Enhancers HUES48 Cell Line embryonic stem cell
45 chr3:87687000-87687400 Enhancers HUES6 Cell Line embryonic stem cell
46 chr3:87687000-87687400 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr3:87687000-87687400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
48 chr3:87687600-87694000 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr3:87693800-87694200 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
50 chr3:87693800-87694200 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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