Variant report

Variant nsv877147
Chromosome Location chr3:88328826-88431461
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88330600-88332200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr3:88332200-88332400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
3 chr3:88332200-88333000 Enhancers Ovary ovary
4 chr3:88332200-88333600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr3:88332400-88339800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr3:88333000-88334000 Weak transcription Ovary ovary
7 chr3:88333600-88334400 Enhancers Small Intestine intestine
8 chr3:88333800-88334000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr3:88334200-88334400 Enhancers Ovary ovary
10 chr3:88339800-88342000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr3:88340400-88341200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr3:88340600-88341000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr3:88341200-88342000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
14 chr3:88347000-88347200 Enhancers Rectal Mucosa Donor 31 rectum
15 chr3:88347200-88347600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
16 chr3:88347200-88348000 Enhancers Primary T cells from cord blood blood
17 chr3:88347400-88347800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr3:88347600-88347800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr3:88347800-88348000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
20 chr3:88347800-88350000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr3:88348000-88348600 Enhancers Rectal Mucosa Donor 31 rectum
22 chr3:88348600-88350000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr3:88350000-88351000 Enhancers Rectal Mucosa Donor 31 rectum
24 chr3:88350000-88352000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr3:88351000-88358600 Weak transcription Right Atrium heart
26 chr3:88352200-88352800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
27 chr3:88355200-88360000 Enhancers HUES48 Cell Line embryonic stem cell
28 chr3:88355400-88357400 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr3:88355600-88357000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr3:88355600-88359000 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr3:88355600-88359800 Enhancers HUES6 Cell Line embryonic stem cell
32 chr3:88355800-88359400 Enhancers HUES64 Cell Line embryonic stem cell
33 chr3:88356000-88356200 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr3:88356000-88356200 Enhancers H1 Cell Line embryonic stem cell
35 chr3:88356200-88356800 Weak transcription H1 Cell Line embryonic stem cell
36 chr3:88356200-88358400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr3:88356800-88357000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:88356800-88357200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr3:88356800-88357200 Enhancers Brain Germinal Matrix brain
40 chr3:88356800-88357200 Bivalent Enhancer Fetal Muscle Trunk muscle
41 chr3:88356800-88357200 Enhancers Pancreas Pancrea
42 chr3:88356800-88357600 Enhancers H1 Cell Line embryonic stem cell
43 chr3:88357000-88357200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
44 chr3:88357000-88357400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
45 chr3:88357000-88357800 Enhancers H9 Cell Line embryonic stem cell
46 chr3:88357400-88358000 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr3:88357400-88358800 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr3:88358000-88359000 Enhancers iPS-20b Cell Line embryonic stem cell
49 chr3:88358400-88359200 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr3:88359000-88361000 Weak transcription iPS-20b Cell Line embryonic stem cell

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