Variant report

Variant	nsv877309
Chromosome Location	chr3:105373836-105542435
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1375)
CpG islands
(count:245)
Chromatin interactive
region (count:49)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1375 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:105405206-105405556	K562	blood:	n/a	n/a
2	ARID3A	chr3:105375613-105375817	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:105407913-105408076	HepG2	liver:	n/a	n/a
4	ARID3A	chr3:105528393-105528873	HepG2	liver:	n/a	n/a
5	ATF1	chr3:105511127-105511370	K562	blood:	n/a	n/a
6	ATF2	chr3:105493136-105493706	GM12878	blood:	n/a	n/a
7	ATF2	chr3:105520149-105520893	GM12878	blood:	n/a	n/a
8	ATF2	chr3:105483253-105483868	GM12878	blood:	n/a	n/a
9	ATF2	chr3:105520101-105521615	GM12878	blood:	n/a	n/a
10	ATF2	chr3:105441592-105442539	GM12878	blood:	n/a	n/a
11	ATF2	chr3:105517167-105517730	GM12878	blood:	n/a	n/a
12	ATF2	chr3:105525098-105525652	GM12878	blood:	n/a	n/a
13	ATF2	chr3:105483224-105483608	GM12878	blood:	n/a	n/a
14	ATF2	chr3:105441559-105442445	GM12878	blood:	n/a	n/a
15	ATF2	chr3:105521101-105521527	GM12878	blood:	n/a	n/a
16	ATF2	chr3:105525083-105525561	GM12878	blood:	n/a	n/a
17	ATF2	chr3:105471808-105472363	GM12878	blood:	n/a	n/a
18	ATF2	chr3:105493244-105493687	GM12878	blood:	n/a	n/a
19	ATF2	chr3:105517184-105517904	GM12878	blood:	n/a	n/a
20	BACH1	chr3:105438790-105438901	H1-hESC	embryonic stem cell:	n/a	chr3:105438804-105438818
21	BATF	chr3:105441735-105442039	GM12878	blood:	n/a	n/a
22	BATF	chr3:105525226-105525554	GM12878	blood:	n/a	chr3:105525408-105525419 chr3:105525409-105525419
23	BATF	chr3:105517274-105517707	GM12878	blood:	n/a	n/a
24	BATF	chr3:105442092-105442360	GM12878	blood:	n/a	chr3:105442227-105442238 chr3:105442228-105442238
25	BATF	chr3:105493281-105493650	GM12878	blood:	n/a	n/a
26	BATF	chr3:105492176-105492536	GM12878	blood:	n/a	chr3:105492369-105492379 chr3:105492406-105492415 chr3:105492368-105492379
27	BATF	chr3:105493258-105493654	GM12878	blood:	n/a	n/a
28	BATF	chr3:105520925-105521500	GM12878	blood:	n/a	n/a
29	BATF	chr3:105542383-105542589	GM12878	blood:	n/a	chr3:105542508-105542519 chr3:105542509-105542519
30	BATF	chr3:105449914-105450106	GM12878	blood:	n/a	n/a
31	BATF	chr3:105482183-105482519	GM12878	blood:	n/a	n/a
32	BATF	chr3:105525262-105525551	GM12878	blood:	n/a	chr3:105525408-105525419 chr3:105525409-105525419
33	BATF	chr3:105442084-105442403	GM12878	blood:	n/a	chr3:105442227-105442238 chr3:105442228-105442238
34	BATF	chr3:105521104-105521463	GM12878	blood:	n/a	n/a
35	BCL11A	chr3:105534225-105534481	GM12878	blood:	n/a	n/a
36	BCL11A	chr3:105493269-105493642	GM12878	blood:	n/a	n/a
37	BCL11A	chr3:105517310-105517656	GM12878	blood:	n/a	n/a
38	BCL11A	chr3:105525216-105525595	GM12878	blood:	n/a	chr3:105525408-105525417 chr3:105525407-105525416
39	BCL11A	chr3:105441762-105442353	GM12878	blood:	n/a	chr3:105442230-105442239 chr3:105442244-105442253 chr3:105442231-105442240
40	BCL3	chr3:105407608-105408148	A549	lung:	n/a	n/a
41	BCL3	chr3:105520353-105520643	GM12878	blood:	n/a	n/a
42	BCL3	chr3:105442069-105442429	GM12878	blood:	n/a	chr3:105442230-105442239 chr3:105442244-105442253 chr3:105442231-105442240
43	BCL3	chr3:105511037-105511740	A549	lung:	n/a	n/a
44	BCL3	chr3:105521107-105521551	GM12878	blood:	n/a	n/a
45	BCL3	chr3:105493306-105493673	GM12878	blood:	n/a	n/a
46	BCLAF1	chr3:105483867-105484184	GM12878	blood:	n/a	n/a
47	BCLAF1	chr3:105541673-105542336	GM12878	blood:	n/a	n/a
48	BCLAF1	chr3:105441666-105442424	GM12878	blood:	n/a	chr3:105442230-105442239 chr3:105442244-105442253 chr3:105442231-105442240
49	BCLAF1	chr3:105491471-105491958	GM12878	blood:	n/a	n/a
50	BCLAF1	chr3:105520227-105520667	GM12878	blood:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:105510465-105510515	HPAEpiC	pulmonary alveolar:	n/a
2	chr3:105510465-105510515	HPAEpiC	pulmonary alveolar:	n/a
3	chr3:105466016-105466066	NHBE	bronchial:	n/a
4	chr3:105466016-105466066	H1-hESC	embryonic stem cell:	embryo
5	chr3:105466016-105466066	HRE	kidney:	n/a
6	chr3:105466016-105466066	HNPCEpiC	eye:	n/a
7	chr3:105510465-105510515	HepG2	liver:	n/a
8	chr3:105510465-105510515	ProgFib	skin:	n/a
9	chr3:105466016-105466066	ProgFib	skin:	n/a
10	chr3:105542204-105542254	HepG2	liver:	n/a
11	chr3:105510465-105510515	SKMC	muscle:	n/a
12	chr3:105466016-105466066	SK-N-SH_RA	brain:	n/a
13	chr3:105466016-105466066	HCF	heart:	n/a
14	chr3:105466016-105466066	MCF-7	breast:	n/a
15	chr3:105466016-105466066	AoSMC	blood vessel:	n/a
16	chr3:105377640-105377690	ovcar-3	ovarian:	n/a
17	chr3:105542204-105542254	AG10803	skin:	n/a
18	chr3:105510465-105510515	HCM	heart:	n/a
19	chr3:105377640-105377690	GM12891	blood:	n/a
20	chr3:105542204-105542254	PANC-1	pancreas:	n/a
21	chr3:105510465-105510515	HAEpiC	amniotic membrane:	n/a
22	chr3:105377640-105377690	HCPEpiC	choroid plexus:	n/a
23	chr3:105510465-105510515	AG04449	skin:	fetal
24	chr3:105466016-105466066	SKMC	muscle:	n/a
25	chr3:105466016-105466066	GM12892	blood:	n/a
26	chr3:105542204-105542254	NT2-D1	testis:	n/a
27	chr3:105542204-105542254	HEK293	kidney:	embryo
28	chr3:105377640-105377690	HCM	heart:	n/a
29	chr3:105542204-105542254	Jurkat	blood:	n/a
30	chr3:105377640-105377690	SAEC	small airway:	n/a
31	chr3:105466016-105466066	GM19239	blood:	n/a
32	chr3:105466016-105466066	CMK	blood:	n/a
33	chr3:105510465-105510515	GM12878	blood:	n/a
34	chr3:105542204-105542254	AoSMC	blood vessel:	n/a
35	chr3:105510465-105510515	BJ	skin:	n/a
36	chr3:105377640-105377690	ECC-1	luminal epithelium:	n/a
37	chr3:105510465-105510515	LNCaP	prostate:	n/a
38	chr3:105542204-105542254	GM12878	blood:	n/a
39	chr3:105542204-105542254	SAEC	small airway:	n/a
40	chr3:105466016-105466066	SAEC	small airway:	n/a
41	chr3:105542204-105542254	HCT-116	colon:	n/a
42	chr3:105377640-105377690	K562	blood:	n/a
43	chr3:105377640-105377690	SK-N-MC	brain:	n/a
44	chr3:105542204-105542254	BE2_C	brain:	n/a
45	chr3:105510465-105510515	HRE	kidney:	n/a
46	chr3:105542204-105542254	IMR90	lung:	fetal
47	chr3:105466016-105466066	Hela-S3	cervix:	n/a
48	chr3:105377640-105377690	RPTEC	kidney:	n/a
49	chr3:105377640-105377690	HCF	heart:	n/a
50	chr3:105510465-105510515	GM12892	blood:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:105373222..105375120-chr3:105379511..105381347,2	K562	blood:
2	chr3:105504771..105508747-chr3:105511531..105514547,3	MCF-7	breast:
3	chr3:105384518..105386462-chr3:105388169..105391773,3	MCF-7	breast:
4	chr3:105404907..105405695-chr3:106836814..106837354,2	K562	blood:
5	chr3:105535705..105538225-chr3:105539955..105541947,2	K562	blood:
6	chr3:105511734..105513345-chr3:105521951..105524573,2	K562	blood:
7	chr3:105405012..105405745-chr3:106328493..106329187,4	MCF-7	breast:
8	chr3:105404910..105406047-chr3:105927670..105928468,4	MCF-7	breast:
9	chr3:105438428..105441312-chr3:105441392..105443154,2	K562	blood:
10	chr3:105431222..105434203-chr3:105434765..105437080,2	MCF-7	breast:
11	chr3:105536120..105538926-chr3:105539288..105541038,2	MCF-7	breast:
12	chr3:105406789..105409317-chr3:105420283..105423244,2	MCF-7	breast:
13	chr3:105431222..105434203-chr3:105434765..105437080,2	MCF-7	breast:
14	chr3:105531033..105533636-chr3:105537856..105539546,2	MCF-7	breast:
15	chr3:105497500..105500139-chr3:105500274..105501917,2	MCF-7	breast:
16	chr3:105529832..105533992-chr3:105585756..105590627,4	MCF-7	breast:
17	chr3:105429146..105430827-chr3:105431044..105433948,2	K562	blood:
18	chr3:105388584..105391376-chr3:105413040..105414567,2	MCF-7	breast:
19	chr3:105435086..105438281-chr3:105439598..105442695,3	MCF-7	breast:
20	chr3:105536120..105538926-chr3:105539288..105541038,2	MCF-7	breast:
21	chr3:105373222..105375120-chr3:105379511..105381347,2	K562	blood:
22	chr3:105500783..105501463-chr5:106760926..106761803,2	MCF-7	breast:
23	chr3:105438428..105441312-chr3:105441392..105443154,2	K562	blood:
24	chr3:105373294..105375257-chr9:136126002..136127894,2	MCF-7	breast:
25	chr3:105531033..105533636-chr3:105537856..105539546,2	MCF-7	breast:
26	chr3:105388597..105390954-chr3:105393490..105396667,3	MCF-7	breast:
27	chr3:105504771..105508747-chr3:105511531..105514547,3	MCF-7	breast:
28	chr3:105435161..105438047-chr3:105586543..105588230,2	MCF-7	breast:
29	chr3:105404868..105405453-chr3:105840594..105841272,3	MCF-7	breast:
30	chr3:105511734..105513345-chr3:105521951..105524573,2	K562	blood:
31	chr3:105538204..105540971-chr3:105547311..105549205,2	K562	blood:
32	chr3:105435086..105438281-chr3:105439598..105442695,3	MCF-7	breast:
33	chr3:105481713..105484437-chr7:147483253..147485905,2	MCF-7	breast:
34	chr3:105497500..105500139-chr3:105500274..105501917,2	MCF-7	breast:
35	chr3:105404856..105405756-chr3:105840513..105841376,2	MCF-7	breast:
36	chr3:105535705..105538225-chr3:105539955..105541947,2	K562	blood:
37	chr3:105452868..105454661-chr3:105463117..105465166,2	K562	blood:
38	chr3:105409741..105412023-chr3:105415903..105417976,2	K562	blood:
39	chr3:105404904..105405760-chr3:106328270..106329152,3	MCF-7	breast:
40	chr3:105388597..105390954-chr3:105393490..105396667,3	MCF-7	breast:
41	chr3:105429146..105430827-chr3:105431044..105433948,2	K562	blood:
42	chr3:105452868..105454661-chr3:105463117..105465166,2	K562	blood:
43	chr3:105539575..105542989-chr3:105543009..105546955,3	K562	blood:
44	chr3:105391728..105394638-chr3:105395821..105398573,2	MCF-7	breast:
45	chr3:105533973..105536078-chr3:105552694..105554794,2	K562	blood:
46	chr3:105409741..105412023-chr3:105415903..105417976,2	K562	blood:
47	chr3:105388584..105391376-chr3:105413040..105414567,2	MCF-7	breast:
48	chr3:105384518..105386462-chr3:105388169..105391773,3	MCF-7	breast:
49	chr3:105525619..105527234-chr3:105585628..105587643,2	MCF-7	breast:

No data

Variant related genes	Relation type
CBLB	TF binding region
CBLB	CpG island
ENSG00000114423	chromatin interactions

Extended variants
information (count: 6390 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:6390 , 50 per page) page: 1 2 3 4 5 6 7 ... 128

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10490831	chr3:105373836-105373837	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs549458638	chr3:105373842-105373843	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs16851398	chr3:105373843-105373844	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs141474739	chr3:105373883-105373884	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs150373883	chr3:105373884-105373885	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs566235247	chr3:105373887-105373888	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs17202230	chr3:105373929-105373930	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
8	rs12493771	chr3:105373931-105373932	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs574268451	chr3:105373942-105373943	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs544858980	chr3:105373956-105373957	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs180741765	chr3:105373978-105373979	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs185405159	chr3:105374003-105374004	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs189954913	chr3:105374004-105374005	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs12487349	chr3:105374023-105374024	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs527715855	chr3:105374045-105374046	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs542895355	chr3:105374046-105374047	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs575585490	chr3:105374072-105374073	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs370854738	chr3:105374157-105374158	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs531402012	chr3:105374169-105374170	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs181201672	chr3:105374190-105374191	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs376950915	chr3:105374215-105374216	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs202174559	chr3:105374272-105374273	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs73854350	chr3:105374360-105374361	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs373889466	chr3:105374375-105374376	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs149564117	chr3:105374398-105374399	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs565648345	chr3:105374415-105374416	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs373520045	chr3:105374418-105374419	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs368033149	chr3:105374439-105374440	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs185856679	chr3:105374480-105374481	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs568005847	chr3:105374481-105374482	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs538549019	chr3:105374525-105374526	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs556761155	chr3:105374564-105374565	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs546017234	chr3:105374602-105374603	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs537788891	chr3:105374609-105374610	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs9657918	chr3:105374632-105374633	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs578230442	chr3:105374667-105374668	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs2293148	chr3:105374702-105374703	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs143217957	chr3:105374770-105374771	Weak transcription Enhancers Strong transcription Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs9657917	chr3:105374808-105374809	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs9657916	chr3:105374809-105374810	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs542704078	chr3:105374810-105374811	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs9657915	chr3:105374814-105374815	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs41311398	chr3:105374856-105374857	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs531460740	chr3:105374865-105374866	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs529546471	chr3:105374876-105374877	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs543325937	chr3:105374898-105374899	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs41305280	chr3:105374963-105374964	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs564707240	chr3:105374971-105374972	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs191812888	chr3:105374972-105374973	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs532201127	chr3:105374977-105374978	Weak transcription Enhancers Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Renal cell carcinoma	21668985	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18765545	CNVD
Developmental delay	22180640	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:4662 , 50 per page) page: 1 2 3 4 5 6 7 ... 94

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:105366000-105377200	Weak transcription	NHDF-Ad	bronchial
2	chr3:105366600-105375400	Weak transcription	NH-A	brain
3	chr3:105366800-105375200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr3:105366800-105375400	Weak transcription	Osteobl	bone
5	chr3:105367400-105377600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr3:105368600-105376800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr3:105368800-105376800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr3:105368800-105377600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr3:105368800-105388400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr3:105368800-105393400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr3:105369200-105375800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr3:105369400-105375600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr3:105369600-105375800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr3:105371000-105374800	Weak transcription	Fetal Heart	heart
15	chr3:105371400-105377400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
16	chr3:105371400-105382200	Weak transcription	Lung	lung
17	chr3:105371800-105377200	Weak transcription	Fetal Stomach	stomach
18	chr3:105372000-105381800	Weak transcription	Pancreas	Pancrea
19	chr3:105372200-105376000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr3:105372200-105377000	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr3:105372200-105380800	Weak transcription	H9 Cell Line	embryonic stem cell
22	chr3:105372200-105387400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr3:105372400-105376000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr3:105372400-105376400	Weak transcription	Primary B cells from peripheral blood	blood
25	chr3:105372400-105388000	Weak transcription	Stomach Mucosa	stomach
26	chr3:105372600-105374600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr3:105373000-105377200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr3:105373000-105377600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr3:105373000-105381800	Weak transcription	Right Ventricle	heart
30	chr3:105373000-105387800	Weak transcription	Gastric	stomach
31	chr3:105373000-105419600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr3:105373200-105376400	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr3:105373400-105375600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr3:105373400-105376200	Weak transcription	Primary B cells from cord blood	blood
35	chr3:105373400-105376600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr3:105373400-105376600	Weak transcription	Placenta	Placenta
37	chr3:105373400-105401600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
38	chr3:105373600-105374800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr3:105373600-105419600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr3:105373800-105375800	Weak transcription	Fetal Lung	lung
41	chr3:105373800-105406200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr3:105374000-105375600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr3:105374000-105375600	Weak transcription	Primary T helper cells fromperipheralblood	blood
44	chr3:105374200-105375800	Weak transcription	Primary T cells from cord blood	blood
45	chr3:105374200-105375800	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr3:105374200-105375800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
47	chr3:105374200-105375800	Weak transcription	Fetal Muscle Leg	muscle
48	chr3:105374200-105376600	Weak transcription	Placenta Amnion	Placenta Amnion
49	chr3:105374200-105388400	Weak transcription	Brain Hippocampus Middle	brain
50	chr3:105374200-105392600	Weak transcription	Psoas Muscle	Psoas

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links