Variant report

Variant	nsv877555
Chromosome Location	chr3:141740076-141791408
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:743)
CpG islands
(count:367)
Chromatin interactive
region (count:45)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:743 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:141745272-141745595	K562	blood:	n/a	n/a
2	ARID3A	chr3:141747897-141748597	K562	blood:	n/a	n/a
3	ARID3A	chr3:141744250-141744556	K562	blood:	n/a	n/a
4	ARID3A	chr3:141740016-141740343	K562	blood:	n/a	n/a
5	ARID3A	chr3:141746444-141747694	K562	blood:	n/a	chr3:141747189-141747205 chr3:141747188-141747204
6	ARID3A	chr3:141764957-141766278	K562	blood:	n/a	n/a
7	ARID3A	chr3:141741164-141741659	K562	blood:	n/a	n/a
8	ATF1	chr3:141741219-141741530	K562	blood:	n/a	n/a
9	ATF1	chr3:141765160-141765905	K562	blood:	n/a	n/a
10	ATF2	chr3:141741158-141741597	GM12878	blood:	n/a	n/a
11	ATF3	chr3:141765113-141765513	K562	blood:	n/a	n/a
12	BACH1	chr3:141744283-141744373	K562	blood:	n/a	n/a
13	BATF	chr3:141741262-141741489	GM12878	blood:	n/a	n/a
14	BATF	chr3:141747857-141748258	GM12878	blood:	n/a	n/a
15	BCLAF1	chr3:141747250-141747705	GM12878	blood:	n/a	n/a
16	BHLHE40	chr3:141747331-141748152	GM12878	blood:	n/a	n/a
17	BHLHE40	chr3:141747846-141747861	K562	blood:	n/a	n/a
18	BHLHE40	chr3:141741289-141741610	K562	blood:	n/a	n/a
19	BHLHE40	chr3:141746686-141746878	K562	blood:	n/a	n/a
20	BHLHE40	chr3:141764829-141766005	K562	blood:	n/a	n/a
21	CBX3	chr3:141754371-141754865	K562	blood:	n/a	n/a
22	CBX3	chr3:141747898-141748286	K562	blood:	n/a	n/a
23	CBX3	chr3:141746543-141746981	HCT-116	colon:	n/a	n/a
24	CBX3	chr3:141741159-141741668	K562	blood:	n/a	n/a
25	CBX3	chr3:141765122-141765498	K562	blood:	n/a	n/a
26	CBX3	chr3:141764881-141765958	K562	blood:	n/a	n/a
27	CBX3	chr3:141747257-141747778	HCT-116	colon:	n/a	n/a
28	CCNT2	chr3:141765174-141766037	K562	blood:	n/a	chr3:141765396-141765416 chr3:141765789-141765809
29	CCNT2	chr3:141748024-141748269	K562	blood:	n/a	n/a
30	CCNT2	chr3:141741211-141741629	K562	blood:	n/a	chr3:141741410-141741430
31	CEBPB	chr3:141741296-141741599	K562	blood:	n/a	n/a
32	CEBPB	chr3:141784231-141784528	K562	blood:	n/a	n/a
33	CEBPB	chr3:141784283-141784550	K562	blood:	n/a	n/a
34	CEBPB	chr3:141741155-141741617	K562	blood:	n/a	n/a
35	CEBPB	chr3:141765167-141765981	K562	blood:	n/a	n/a
36	CEBPB	chr3:141784236-141784580	H1-hESC	embryonic stem cell:	n/a	n/a
37	CEBPB	chr3:141764863-141766102	K562	blood:	n/a	n/a
38	CEBPB	chr3:141765132-141765508	K562	blood:	n/a	n/a
39	CEBPB	chr3:141753473-141753678	K562	blood:	n/a	n/a
40	CEBPD	chr3:141741233-141741725	K562	blood:	n/a	n/a
41	CEBPD	chr3:141741093-141741665	K562	blood:	n/a	n/a
42	CEBPD	chr3:141765060-141766118	K562	blood:	n/a	n/a
43	CEBPD	chr3:141752114-141752428	K562	blood:	n/a	n/a
44	CEBPD	chr3:141765044-141766325	K562	blood:	n/a	n/a
45	CHD1	chr3:141747304-141747693	GM12878	blood:	n/a	n/a
46	CHD1	chr3:141746848-141747091	H1-hESC	embryonic stem cell:	n/a	n/a
47	CHD1	chr3:141746509-141747085	GM12878	blood:	n/a	n/a
48	CHD2	chr3:141765231-141765789	K562	blood:	n/a	n/a
49	CHD2	chr3:141746672-141746676	GM12878	blood:	n/a	n/a
50	CHD2	chr3:141741176-141741528	GM12878	blood:	n/a	n/a

(count:367 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:141748862-141748912	MCF-7	breast:	n/a
2	chr3:141748862-141748912	MCF-7	breast:	n/a
3	chr3:141748862-141748912	HEK293	kidney:	embryo
4	chr3:141762780-141762830	GM19239	blood:	n/a
5	chr3:141748862-141748912	PANC-1	pancreas:	n/a
6	chr3:141764977-141765027	GM12891	blood:	n/a
7	chr3:141764977-141765027	AG04450	lung:	fetal
8	chr3:141764977-141765027	A549	lung:	n/a
9	chr3:141762780-141762830	HL-60	blood:	n/a
10	chr3:141762780-141762830	HAEpiC	amniotic membrane:	n/a
11	chr3:141762963-141763013	MCF10A-Er-Src	breast:	n/a
12	chr3:141748862-141748912	HAEpiC	amniotic membrane:	n/a
13	chr3:141762963-141763013	PANC-1	pancreas:	n/a
14	chr3:141748862-141748912	HCM	heart:	n/a
15	chr3:141764977-141765027	PFSK-1	brain:	n/a
16	chr3:141762828-141762878	HUVEC	blood vessel:	n/a
17	chr3:141748862-141748912	AG10803	skin:	n/a
18	chr3:141762780-141762830	HCM	heart:	n/a
19	chr3:141762780-141762830	K562	blood:	n/a
20	chr3:141783929-141783979	GM06990	blood:	n/a
21	chr3:141764977-141765027	AG10803	skin:	n/a
22	chr3:141762780-141762830	PFSK-1	brain:	n/a
23	chr3:141783929-141783979	HNPCEpiC	eye:	n/a
24	chr3:141764977-141765027	SK-N-SH	brain:	n/a
25	chr3:141764977-141765027	ovcar-3	ovarian:	n/a
26	chr3:141762963-141763013	AG10803	skin:	n/a
27	chr3:141762780-141762830	ECC-1	luminal epithelium:	n/a
28	chr3:141762780-141762830	HMEC	breast:	n/a
29	chr3:141783929-141783979	IMR90	lung:	fetal
30	chr3:141764977-141765027	BJ	skin:	n/a
31	chr3:141783929-141783979	NT2-D1	testis:	n/a
32	chr3:141764977-141765027	HUVEC	blood vessel:	n/a
33	chr3:141762828-141762878	PrEC	prostate:	n/a
34	chr3:141748862-141748912	NB4	blood:	n/a
35	chr3:141764977-141765027	MCF10A-Er-Src	breast:	n/a
36	chr3:141762963-141763013	HIPEpiC	eye:	n/a
37	chr3:141748862-141748912	AG09319	gingival:	n/a
38	chr3:141762963-141763013	NB4	blood:	n/a
39	chr3:141748862-141748912	AoSMC	blood vessel:	n/a
40	chr3:141783929-141783979	BJ	skin:	n/a
41	chr3:141762828-141762878	PFSK-1	brain:	n/a
42	chr3:141748862-141748912	IMR90	lung:	fetal
43	chr3:141762828-141762878	HRPEpiC	eye:	n/a
44	chr3:141762828-141762878	AG09309	skin:	n/a
45	chr3:141762963-141763013	H1-hESC	embryonic stem cell:	embryo
46	chr3:141748862-141748912	BJ	skin:	n/a
47	chr3:141762828-141762878	HL-60	blood:	n/a
48	chr3:141762780-141762830	NT2-D1	testis:	n/a
49	chr3:141764977-141765027	SK-N-MC	brain:	n/a
50	chr3:141762828-141762878	GM12878	blood:	n/a

(count:45 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:141740842..141741377-chr3:141998535..141999516,2	K562	blood:
2	chr3:141724450..141726280-chr3:141745104..141746996,2	K562	blood:
3	chr3:141738796..141742970-chr3:141745258..141748964,7	K562	blood:
4	chr3:141772397..141774089-chr3:141777472..141780381,2	K562	blood:
5	chr3:141736074..141738288-chr3:141741449..141743046,2	K562	blood:
6	chr3:141746397..141747918-chr3:142295641..142297892,2	K562	blood:
7	chr3:141752908..141754951-chr3:141758367..141761126,3	K562	blood:
8	chr3:141765382..141767176-chr3:141772359..141774549,2	K562	blood:
9	chr3:141750870..141754798-chr3:141761535..141764566,4	K562	blood:
10	chr3:141740878..141741732-chr3:141899625..141900228,2	MCF-7	breast:
11	chr3:141748723..141752115-chr3:141753472..141758138,4	MCF-7	breast:
12	chr3:141743896..141745578-chr3:141745998..141747599,2	MCF-7	breast:
13	chr3:141743220..141745863-chr3:141763714..141765255,2	K562	blood:
14	chr3:141739963..141741863-chr3:141746607..141749166,2	MCF-7	breast:
15	chr3:141742047..141744583-chr3:141758221..141760066,2	K562	blood:
16	chr3:141747548..141749276-chr3:141782334..141784054,2	MCF-7	breast:
17	chr3:141151754..141154048-chr3:141748045..141749745,2	K562	blood:
18	chr3:141772328..141774089-chr3:141777712..141780381,2	K562	blood:
19	chr3:141765382..141767176-chr3:141772359..141774549,2	K562	blood:
20	chr3:141743469..141745043-chr3:141753876..141755747,2	K562	blood:
21	chr3:141746024..141748965-chr3:160116774..160118286,2	K562	blood:
22	chr3:141746170..141748544-chr3:141765557..141767704,2	K562	blood:
23	chr3:141746178..141749439-chr3:141764015..141767847,4	K562	blood:
24	chr3:141767270..141770576-chr3:141773885..141776587,3	K562	blood:
25	chr3:141776813..141779383-chr3:141780587..141782430,2	K562	blood:
26	chr3:141739542..141742444-chr3:142003603..142005533,2	K562	blood:
27	chr3:141776813..141779383-chr3:141780587..141782430,2	K562	blood:
28	chr3:141772397..141774089-chr3:141777472..141780381,2	K562	blood:
29	chr3:141772328..141774089-chr3:141777712..141780381,2	K562	blood:
30	chr3:141765860..141768702-chr3:141834792..141837643,2	K562	blood:
31	chr3:141743469..141745043-chr3:141753876..141755747,2	K562	blood:
32	chr3:141743220..141745863-chr3:141763714..141765255,2	K562	blood:
33	chr3:141745791..141750569-chr3:141753730..141757585,7	K562	blood:
34	chr3:141740917..141741877-chr3:141764906..141765846,2	K562	blood:
35	chr3:141748723..141752115-chr3:141753472..141758138,4	MCF-7	breast:
36	chr3:141596118..141597741-chr3:141743168..141745555,2	K562	blood:
37	chr3:141740917..141741877-chr3:141764906..141765846,2	K562	blood:
38	chr3:141742047..141744583-chr3:141758221..141760066,2	K562	blood:
39	chr3:141732044..141735482-chr3:141738671..141741539,4	MCF-7	breast:
40	chr3:141751486..141755736-chr3:141759507..141766558,8	K562	blood:
41	chr3:141767270..141770576-chr3:141773885..141776587,3	K562	blood:
42	chr3:141752908..141754951-chr3:141758367..141761126,3	K562	blood:
43	chr3:141789085..141790599-chr3:141791414..141793692,2	MCF-7	breast:
44	chr3:141747854..141750364-chr3:141771803..141774496,2	MCF-7	breast:
45	chr1:202085934..202088826-chr3:141779136..141781977,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000233597	TF binding region
TFDP2	TF binding region
ENSG00000233597	CpG island
TFDP2	CpG island
ENSG00000068885	chromatin interactions
ENSG00000233597	chromatin interactions
ENSG00000113810	chromatin interactions
ENSG00000114126	chromatin interactions
ENSG00000175054	chromatin interactions
ENSG00000069849	chromatin interactions

Extended variants
information (count: 1832 )
Associated
traits (count: 52 )

Variant overlapped rSNPs/rCNVs (count:1832 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs733996	chr3:141740076-141740077	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs186006134	chr3:141740170-141740171	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs143714335	chr3:141740186-141740187	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs9867745	chr3:141740220-141740221	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs559150273	chr3:141740224-141740225	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs571066457	chr3:141740238-141740239	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs34738708	chr3:141740246-141740247	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs148130726	chr3:141740268-141740269	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs556838196	chr3:141740333-141740334	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs191327766	chr3:141740381-141740382	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs542245098	chr3:141740403-141740404	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs141955525	chr3:141740410-141740411	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs146131076	chr3:141740456-141740457	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs545893731	chr3:141740472-141740473	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs182504939	chr3:141740473-141740474	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs907294	chr3:141740492-141740493	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs187536763	chr3:141740611-141740612	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs139005774	chr3:141740628-141740629	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs529642104	chr3:141740713-141740714	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs545950368	chr3:141740738-141740739	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs548208385	chr3:141740745-141740746	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs190317429	chr3:141740792-141740793	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs79861626	chr3:141740799-141740800	Weak transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs552317543	chr3:141740803-141740804	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs115544295	chr3:141740866-141740867	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs375902487	chr3:141740872-141740873	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs114840650	chr3:141740923-141740924	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs568779129	chr3:141740930-141740931	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs530780772	chr3:141740939-141740940	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs553706087	chr3:141741001-141741002	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs550583671	chr3:141741013-141741014	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs559208264	chr3:141741074-141741075	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs545856573	chr3:141741076-141741077	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs557849344	chr3:141741079-141741080	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs142286042	chr3:141741106-141741107	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs544429404	chr3:141741178-141741179	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs145925151	chr3:141741181-141741182	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs78997137	chr3:141741185-141741186	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs139819240	chr3:141741191-141741192	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs574720819	chr3:141741281-141741282	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs116586925	chr3:141741317-141741318	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs113494903	chr3:141741340-141741341	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs528156216	chr3:141741371-141741372	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs114340493	chr3:141741375-141741376	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs552280892	chr3:141741447-141741448	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs572905287	chr3:141741480-141741481	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs547822446	chr3:141741543-141741544	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs564206853	chr3:141741607-141741608	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs531804910	chr3:141741618-141741619	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs35140865	chr3:141741620-141741621	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:52)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
microdeletion syndrome	22180640	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	18645599	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Hepatocellular carcinoma	16750200	CNVD
Lung cancer	16740712	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myelodysplastic syndrome	21251322	CNVD
Blepharophimosis-ptosis-epicanthus inversus syndrome	22067867	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
abnormal development	18461090	CNVD
Cancer	21129771	CNVD
Ovarian cancer	23621864	CNVD
Congenital anomalies of the kidney and urinary tract	20605837	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:869 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:141678800-141745600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
2	chr3:141682800-141745800	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr3:141682800-141746200	Weak transcription	Primary B cells from peripheral blood	blood
4	chr3:141683800-141746600	Weak transcription	Lung	lung
5	chr3:141706400-141746200	Weak transcription	Fetal Lung	lung
6	chr3:141708600-141745200	Weak transcription	H1 Cell Line	embryonic stem cell
7	chr3:141716000-141745600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr3:141720200-141746600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr3:141720400-141742600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr3:141722600-141745400	Weak transcription	Cortex derived primary cultured neurospheres	brain
11	chr3:141723400-141745400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr3:141723400-141745400	Weak transcription	Fetal Kidney	kidney
13	chr3:141724400-141741200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr3:141724400-141745000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr3:141728200-141746200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr3:141731400-141745400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr3:141733200-141746200	Weak transcription	Adipose Nuclei	Adipose
18	chr3:141733400-141745800	Weak transcription	Fetal Stomach	stomach
19	chr3:141733400-141746600	Weak transcription	Colon Smooth Muscle	Colon
20	chr3:141733600-141747200	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr3:141734000-141745400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr3:141734200-141745400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
23	chr3:141734600-141746200	Weak transcription	NH-A	brain
24	chr3:141735000-141746200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
25	chr3:141735800-141746200	Weak transcription	Right Ventricle	heart
26	chr3:141736000-141740800	Weak transcription	Thymus	Thymus
27	chr3:141737800-141746200	Weak transcription	H9 Cell Line	embryonic stem cell
28	chr3:141738000-141741000	Weak transcription	Brain Hippocampus Middle	brain
29	chr3:141738200-141742000	Enhancers	Primary hematopoietic stem cells short term culture	blood
30	chr3:141738200-141742600	Enhancers	Primary hematopoietic stem cells	blood
31	chr3:141738400-141740200	Enhancers	HUVEC	blood vessel
32	chr3:141738400-141741600	Enhancers	Primary neutrophils fromperipheralblood	blood
33	chr3:141738600-141740200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
34	chr3:141738600-141740400	Enhancers	Skeletal Muscle Female	skeletal muscle
35	chr3:141738600-141742400	Genic enhancers	Dnd41	blood
36	chr3:141738800-141740400	Enhancers	Skeletal Muscle Male	skeletal muscle
37	chr3:141738800-141741000	Weak transcription	Brain Angular Gyrus	brain
38	chr3:141738800-141741400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr3:141739000-141740600	Genic enhancers	Fetal Thymus	thymus
40	chr3:141739000-141741000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
41	chr3:141739000-141741000	Enhancers	K562	blood
42	chr3:141739000-141745400	Weak transcription	NHEK	skin
43	chr3:141739000-141745600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
44	chr3:141739000-141746200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
45	chr3:141739000-141746400	Weak transcription	Duodenum Smooth Muscle	Duodenum
46	chr3:141739200-141741000	Weak transcription	HSMM	muscle
47	chr3:141739200-141742800	Weak transcription	Duodenum Mucosa	Duodenum
48	chr3:141739200-141745400	Weak transcription	Primary B cells from cord blood	blood
49	chr3:141739200-141745400	Weak transcription	Primary T cells from cord blood	blood
50	chr3:141739200-141747200	Weak transcription	Small Intestine	intestine

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