Variant report
Variant | nsv877820 |
---|---|
Chromosome Location | chr3:163557163-164167085 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1722)
- CpG islands (count:1038)
- Chromatin interactive region (count:79)
- LncRNA region (count:7)
- Mature miRNA region (count: 1)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BACH1 | chr3:164133548-164133563 | K562 | blood: | n/a | n/a |
2 | BACH1 | chr3:163946376-163946549 | H1-hESC | embryonic stem cell: | n/a | n/a |
3 | BHLHE40 | chr3:164065590-164065659 | K562 | blood: | n/a | n/a |
4 | BRCA1 | chr3:163587990-163587992 | Hela-S3 | cervix: | n/a | n/a |
5 | BRCA1 | chr3:163722192-163722316 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | BRCA1 | chr3:163881866-163881882 | Hela-S3 | cervix: | n/a | n/a |
7 | CBX3 | chr3:163596204-163596574 | HCT-116 | colon: | n/a | n/a |
8 | CBX3 | chr3:163596203-163596538 | HCT-116 | colon: | n/a | n/a |
9 | CEBPB | chr3:163636968-163637322 | IMR90 | lung: | n/a | chr3:163637142-163637153 |
10 | CEBPB | chr3:163860167-163860485 | HepG2 | liver: | n/a | chr3:163860323-163860334 |
11 | CEBPB | chr3:163859641-163859926 | HepG2 | liver: | n/a | n/a |
12 | CEBPB | chr3:164093357-164093663 | A549 | lung: | n/a | chr3:164093476-164093487 chr3:164093572-164093583 |
13 | CEBPB | chr3:163776817-163777197 | A549 | lung: | n/a | chr3:163777001-163777012 |
14 | CEBPB | chr3:163637047-163637323 | H1-hESC | embryonic stem cell: | n/a | chr3:163637142-163637153 |
15 | CEBPB | chr3:163885974-163886233 | A549 | lung: | n/a | chr3:163886110-163886119 chr3:163886110-163886119 chr3:163886110-163886119 chr3:163886109-163886120 chr3:163886108-163886121 chr3:163886108-163886119 chr3:163886110-163886119 |
16 | CEBPB | chr3:163811615-163811972 | Hela-S3 | cervix: | n/a | chr3:163811787-163811796 chr3:163811785-163811796 |
17 | CEBPB | chr3:163742739-163742774 | A549 | lung: | n/a | n/a |
18 | CEBPB | chr3:163937041-163937366 | HepG2 | liver: | n/a | chr3:163937193-163937204 |
19 | CEBPB | chr3:163766262-163766585 | K562 | blood: | n/a | chr3:163766435-163766446 |
20 | CEBPB | chr3:164132486-164132757 | A549 | lung: | n/a | chr3:164132597-164132608 |
21 | CEBPB | chr3:163637042-163637289 | K562 | blood: | n/a | chr3:163637142-163637153 |
22 | CEBPB | chr3:163805104-163805270 | HepG2 | liver: | n/a | chr3:163805134-163805145 |
23 | CEBPB | chr3:163636991-163637415 | MCF-7 | breast: | n/a | chr3:163637142-163637153 |
24 | CEBPB | chr3:163912780-163912994 | A549 | lung: | n/a | n/a |
25 | CEBPB | chr3:163980083-163980289 | Hela-S3 | cervix: | n/a | chr3:163980184-163980195 |
26 | CEBPB | chr3:164107072-164107346 | HepG2 | liver: | n/a | chr3:164107227-164107236 chr3:164107225-164107238 chr3:164107227-164107236 chr3:164107227-164107236 chr3:164107226-164107237 chr3:164107225-164107238 chr3:164107225-164107236 chr3:164107227-164107236 |
27 | CEBPB | chr3:163636925-163637363 | MCF-7 | breast: | n/a | chr3:163637142-163637153 |
28 | CEBPB | chr3:163765379-163765657 | HepG2 | liver: | n/a | chr3:163765471-163765482 |
29 | CEBPB | chr3:163961690-163962327 | MCF-7 | breast: | n/a | chr3:163961848-163961865 |
30 | CEBPB | chr3:163980067-163980373 | HepG2 | liver: | n/a | chr3:163980184-163980195 |
31 | CEBPB | chr3:163937094-163937307 | K562 | blood: | n/a | chr3:163937193-163937204 |
32 | CEBPB | chr3:164107093-164107343 | IMR90 | lung: | n/a | chr3:164107227-164107236 chr3:164107225-164107238 chr3:164107227-164107236 chr3:164107227-164107236 chr3:164107226-164107237 chr3:164107225-164107238 chr3:164107225-164107236 chr3:164107227-164107236 |
33 | CEBPB | chr3:164066095-164066166 | Hela-S3 | cervix: | n/a | n/a |
34 | CEBPB | chr3:163766296-163766594 | H1-hESC | embryonic stem cell: | n/a | chr3:163766435-163766446 |
35 | CEBPB | chr3:163766280-163766585 | Hela-S3 | cervix: | n/a | chr3:163766435-163766446 |
36 | CEBPB | chr3:164078036-164078173 | H1-hESC | embryonic stem cell: | n/a | chr3:164078134-164078145 |
37 | CEBPB | chr3:163912738-163913096 | MCF-7 | breast: | n/a | n/a |
38 | CEBPB | chr3:163811663-163811965 | MCF-7 | breast: | n/a | chr3:163811787-163811796 chr3:163811785-163811796 |
39 | CEBPB | chr3:163912779-163913052 | HepG2 | liver: | n/a | n/a |
40 | CEBPB | chr3:163636959-163637331 | HepG2 | liver: | n/a | chr3:163637142-163637153 |
41 | CEBPB | chr3:163937023-163937362 | A549 | lung: | n/a | chr3:163937193-163937204 |
42 | CEBPB | chr3:164107081-164107356 | A549 | lung: | n/a | chr3:164107227-164107236 chr3:164107225-164107238 chr3:164107227-164107236 chr3:164107227-164107236 chr3:164107226-164107237 chr3:164107225-164107238 chr3:164107225-164107236 chr3:164107227-164107236 |
43 | CEBPB | chr3:164077996-164078260 | A549 | lung: | n/a | chr3:164078134-164078145 |
44 | CEBPB | chr3:163890818-163891012 | HepG2 | liver: | n/a | chr3:163890911-163890922 |
45 | CEBPB | chr3:163766344-163766626 | MCF-7 | breast: | n/a | chr3:163766435-163766446 |
46 | CEBPB | chr3:163937048-163937294 | Hela-S3 | cervix: | n/a | chr3:163937193-163937204 |
47 | CEBPB | chr3:163811718-163811889 | H1-hESC | embryonic stem cell: | n/a | chr3:163811787-163811796 chr3:163811785-163811796 |
48 | CEBPB | chr3:163767753-163767980 | HepG2 | liver: | n/a | chr3:163767891-163767904 |
49 | CEBPB | chr3:163637008-163637304 | A549 | lung: | n/a | chr3:163637142-163637153 |
50 | CEBPB | chr3:163776828-163777158 | HepG2 | liver: | n/a | chr3:163777001-163777012 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:164059124-164059174 | HepG2 | liver: | n/a |
2 | chr3:164059124-164059174 | HepG2 | liver: | n/a |
3 | chr3:163719236-163719286 | HCM | heart: | n/a |
4 | chr3:164056463-164056513 | ovcar-3 | ovarian: | n/a |
5 | chr3:164009569-164009619 | H1-hESC | embryonic stem cell: | embryo |
6 | chr3:163719428-163719478 | MCF-7 | breast: | n/a |
7 | chr3:163722294-163722344 | NB4 | blood: | n/a |
8 | chr3:163722294-163722344 | HRPEpiC | eye: | n/a |
9 | chr3:163722294-163722344 | Jurkat | blood: | n/a |
10 | chr3:164059255-164059305 | HCM | heart: | n/a |
11 | chr3:164009569-164009619 | HNPCEpiC | eye: | n/a |
12 | chr3:164119959-164120009 | HCF | heart: | n/a |
13 | chr3:163719236-163719286 | MCF-7 | breast: | n/a |
14 | chr3:163608814-163608864 | IMR90 | lung: | fetal |
15 | chr3:164119959-164120009 | GM12892 | blood: | n/a |
16 | chr3:164119959-164120009 | HCM | heart: | n/a |
17 | chr3:163719236-163719286 | NH-A | brain: | n/a |
18 | chr3:164119020-164119070 | AG09309 | skin: | n/a |
19 | chr3:163719236-163719286 | AG09309 | skin: | n/a |
20 | chr3:163608814-163608864 | BJ | skin: | n/a |
21 | chr3:163719236-163719286 | K562 | blood: | n/a |
22 | chr3:164059124-164059174 | HAEpiC | amniotic membrane: | n/a |
23 | chr3:164009569-164009619 | IMR90 | lung: | fetal |
24 | chr3:164119737-164119787 | HCF | heart: | n/a |
25 | chr3:164119020-164119070 | RPTEC | kidney: | n/a |
26 | chr3:163722208-163722258 | HepG2 | liver: | n/a |
27 | chr3:163722051-163722101 | HRPEpiC | eye: | n/a |
28 | chr3:164056753-164056803 | HCM | heart: | n/a |
29 | chr3:164059124-164059174 | AoSMC | blood vessel: | n/a |
30 | chr3:164050953-164051003 | HCM | heart: | n/a |
31 | chr3:164059011-164059061 | HPAEpiC | pulmonary alveolar: | n/a |
32 | chr3:163722051-163722101 | PANC-1 | pancreas: | n/a |
33 | chr3:163722051-163722101 | HEEpiC | esophagus: | n/a |
34 | chr3:164056753-164056803 | SKMC | muscle: | n/a |
35 | chr3:163719428-163719478 | NT2-D1 | testis: | n/a |
36 | chr3:164050953-164051003 | Jurkat | blood: | n/a |
37 | chr3:163719236-163719286 | Hepatocyte | liver: | n/a |
38 | chr3:164119737-164119787 | GM12878 | blood: | n/a |
39 | chr3:164059124-164059174 | SK-N-SH | brain: | n/a |
40 | chr3:164059011-164059061 | GM19239 | blood: | n/a |
41 | chr3:164119020-164119070 | HAEpiC | amniotic membrane: | n/a |
42 | chr3:164059255-164059305 | CMK | blood: | n/a |
43 | chr3:164119737-164119787 | SK-N-MC | brain: | n/a |
44 | chr3:164119959-164120009 | LNCaP | prostate: | n/a |
45 | chr3:164009569-164009619 | AG04449 | skin: | fetal |
46 | chr3:163722294-163722344 | GM06990 | blood: | n/a |
47 | chr3:164050953-164051003 | HIPEpiC | eye: | n/a |
48 | chr3:163722051-163722101 | U87 | brain: | n/a |
49 | chr3:164050953-164051003 | A549 | lung: | n/a |
50 | chr3:164119737-164119787 | IMR90 | lung: | fetal |
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr3:164154258..164155585-chr3:164352234..164353310,15 | MCF-7 | breast: | |
2 | chr3:163919977..163922257-chr3:163923536..163925910,2 | MCF-7 | breast: | |
3 | chr17:57914661..57917089-chr3:163901184..163903192,2 | MCF-7 | breast: | |
4 | chr3:163660440..163662829-chr3:163666000..163668542,2 | K562 | blood: | |
5 | chr3:163831824..163833454-chr3:163836559..163838959,2 | K562 | blood: | |
6 | chr3:163634067..163635345-chr3:163668973..163669822,4 | MCF-7 | breast: | |
7 | chr3:164097731..164098551-chr3:164154660..164155422,4 | MCF-7 | breast: | |
8 | chr3:163741470..163744256-chr3:163747090..163749437,2 | K562 | blood: | |
9 | chr3:164093244..164094225-chr3:164903325..164904113,2 | MCF-7 | breast: | |
10 | chr3:164097647..164098715-chr3:164154502..164155534,19 | MCF-7 | breast: | |
11 | chr3:163919977..163922257-chr3:163923536..163925910,2 | MCF-7 | breast: | |
12 | chr3:163497409..163497997-chr3:163668939..163669921,2 | MCF-7 | breast: | |
13 | chr3:164072695..164075481-chr3:164078791..164081086,2 | MCF-7 | breast: | |
14 | chr3:163219408..163221189-chr3:163663438..163665910,2 | K562 | blood: | |
15 | chr3:163634067..163635345-chr3:163668973..163669822,4 | MCF-7 | breast: | |
16 | chr3:164097647..164098678-chr3:164154502..164155534,10 | MCF-7 | breast: | |
17 | chr3:163611385..163613477-chr3:163617466..163620081,2 | K562 | blood: | |
18 | chr3:163503157..163504078-chr3:163634240..163634926,2 | MCF-7 | breast: | |
19 | chr3:164033562..164036466-chr3:164041623..164043945,2 | MCF-7 | breast: | |
20 | chr3:164097709..164098424-chr3:164241494..164242452,3 | MCF-7 | breast: | |
21 | chr3:163611385..163613477-chr3:163617466..163620081,2 | K562 | blood: | |
22 | chr3:164032173..164034796-chr3:164095339..164097722,2 | K562 | blood: | |
23 | chr3:163580902..163583898-chr3:163589100..163591236,2 | K562 | blood: | |
24 | chr3:163988892..163990964-chr3:163991912..163993953,2 | K562 | blood: | |
25 | chr3:163674674..163675466-chr3:164524045..164524647,3 | MCF-7 | breast: | |
26 | chr3:163759624..163761925-chr3:163765313..163767072,2 | MCF-7 | breast: | |
27 | chr3:163756511..163759205-chr3:163797731..163799263,2 | MCF-7 | breast: | |
28 | chr3:163738641..163741233-chr3:163742705..163744722,2 | MCF-7 | breast: | |
29 | chr3:164097711..164098324-chr3:164241488..164242482,3 | MCF-7 | breast: | |
30 | chr3:163660440..163662829-chr3:163666000..163668542,2 | K562 | blood: | |
31 | chr3:164097708..164098703-chr3:164352353..164353241,9 | MCF-7 | breast: | |
32 | chr3:163756511..163759205-chr3:163797731..163799263,2 | MCF-7 | breast: | |
33 | chr3:163759624..163761925-chr3:163765313..163767072,2 | MCF-7 | breast: | |
34 | chr3:163639118..163640834-chr3:163641183..163642713,2 | MCF-7 | breast: | |
35 | chr14:86195432..86196215-chr3:163793960..163794780,2 | MCF-7 | breast: | |
36 | chr15:52587462..52588981-chr3:163831086..163833177,2 | MCF-7 | breast: | |
37 | chr3:163995585..163997750-chr3:164093655..164096327,2 | K562 | blood: | |
38 | chr3:163968485..163970197-chr3:163971709..163973734,2 | MCF-7 | breast: | |
39 | chr3:164154966..164155479-chr3:164352397..164353197,2 | MCF-7 | breast: | |
40 | chr3:164145149..164147604-chr3:164148897..164151396,2 | MCF-7 | breast: | |
41 | chr3:164097731..164098551-chr3:164154660..164155422,4 | MCF-7 | breast: | |
42 | chr3:164072695..164075481-chr3:164078791..164081086,2 | MCF-7 | breast: | |
43 | chr3:163639924..163641654-chr3:163663861..163665823,2 | MCF-7 | breast: | |
44 | chr3:163664276..163666199-chr3:163667456..163669439,2 | MCF-7 | breast: | |
45 | chr3:163639118..163640834-chr3:163641183..163642713,2 | MCF-7 | breast: | |
46 | chr3:164050649..164051226-chr3:164523700..164524566,2 | MCF-7 | breast: | |
47 | chr3:163674728..163675758-chr3:164903457..164904093,3 | MCF-7 | breast: | |
48 | chr3:163831824..163833454-chr3:163836559..163838959,2 | K562 | blood: | |
49 | chr3:163741470..163744256-chr3:163747090..163749437,2 | K562 | blood: | |
50 | chr3:164097711..164098324-chr3:164241488..164242187,2 | MCF-7 | breast: |
(count:7 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-OTOL1-4 | chr3:164136236-164136391 | XLOC_002899 |
2 | lnc-OTOL1-11 | chr3:163589437-163589637 | NONHSAT093044 |
3 | lnc-OTOL1-4 | chr3:164137191-164137295 | XLOC_002899 |
4 | lnc-OTOL1-4 | chr3:164088402-164088464 | XLOC_002899 |
5 | lnc-OTOL1-4 | chr3:164078868-164078917 | XLOC_002899 |
6 | lnc-SI-6 | chr3:163719394-163720253 | NONHSAT093045 |
7 | lnc-OTOL1-11 | chr3:163587101-163587643 | NONHSAT093044 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-1263 | chr3:163889311-163889332 | MIMAT0005915 |
No data |
Variant related genes | Relation type |
---|---|
MIR1263 | TF binding region |
MIR720 | TF binding region |
ENSG00000214210 | TF binding region |
MIR1263 | CpG island |
MIR720 | CpG island |
ENSG00000214210 | CpG island |
ENSG00000128833 | chromatin interactions |
ENSG00000062716 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs1492787 | chr3:163557163-163557164 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs181412716 | chr3:163557171-163557172 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs562766606 | chr3:163557236-163557237 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs531705410 | chr3:163557237-163557238 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs546222609 | chr3:163557255-163557256 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs185528896 | chr3:163557265-163557266 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs9860328 | chr3:163557282-163557283 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
8 | rs182920182 | chr3:163557292-163557293 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs186038945 | chr3:163557332-163557333 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs570933339 | chr3:163557337-163557338 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs36022510 | chr3:163557357-163557358 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
12 | rs55716404 | chr3:163557800-163557801 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs369384884 | chr3:163557892-163557893 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs534465610 | chr3:163557903-163557904 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs555989841 | chr3:163557907-163557908 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs79828853 | chr3:163557966-163557967 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs144474577 | chr3:163559014-163559015 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs547805310 | chr3:163559050-163559051 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs567948444 | chr3:163559092-163559093 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs536483167 | chr3:163559100-163559101 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs550403829 | chr3:163559114-163559115 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs113479109 | chr3:163559132-163559133 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs560732484 | chr3:163559187-163559188 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs544914180 | chr3:163559190-163559191 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs189966019 | chr3:163559196-163559197 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs542340790 | chr3:163566052-163566053 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs562241267 | chr3:163566141-163566142 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs577099097 | chr3:163566183-163566184 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs541796779 | chr3:163566450-163566451 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs188578067 | chr3:163566461-163566462 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs527371383 | chr3:163566464-163566465 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs35728333 | chr3:163566566-163566567 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs376104283 | chr3:163566679-163566680 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs570155883 | chr3:163566701-163566702 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs373302999 | chr3:163566743-163566744 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs538720049 | chr3:163566795-163566796 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs148692764 | chr3:163566816-163566817 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs192695743 | chr3:163566819-163566820 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs565908912 | chr3:163566854-163566855 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs375746818 | chr3:163566919-163566920 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs200384983 | chr3:163566925-163566926 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs534110402 | chr3:163566930-163566931 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs77981120 | chr3:163566946-163566947 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs370125553 | chr3:163567009-163567010 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs372567207 | chr3:163567010-163567011 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs566824177 | chr3:163567011-163567012 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs115616277 | chr3:163567020-163567021 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs532711173 | chr3:163567047-163567048 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs13059328 | chr3:163567058-163567059 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs13059483 | chr3:163567068-163567069 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 17053054 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Intellectual disability | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Melanoma | 18172304 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 22032731 | CNVD |
Breast cancer | 16461572 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Cervical Cancer | 21857958 | CNVD |
Melanoma | 21693616 | CNVD |
Lung cancer | 21426551 | CNVD |
Cancer | 21637783 | CNVD |
Cervical cancer | 21063398 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Liposarcoma | 21253554 | CNVD |
Oral cancer | 21386901 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 22065749 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 16608533 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Prostate cancer | 16547154 | CNVD |
Breast cancer | 21364760 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Prostate cancer | 16573809 | CNVD |
Breast cancer | 21785460 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Mantle cell lymphoma | 19029149 | CNVD |
Malformation | 19546859 | CNVD |
Schizophrenia | 19546859 | CNVD |
Breast cancer | 17133270 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Attention deficit hyperactivity disorder | 21324949 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
epilepsy | 18472482 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Parkinson disease | 21907011 | CNVD |
Bladder cancer | 21909424 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Cancer | 20164919 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Alcoholism | 21790672 | CNVD |
Schizophrenia | 20967226 | CNVD |
Acute myeloid leukemia | 19651600 | CNVD |
Autism | 19287141 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Rett syndrome | 21593744 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Glioma | 20126413 | CNVD |
Recurrent pregnancy loss | 19789632 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr3:163556600-163557200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
2 | chr3:163557000-163557400 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
3 | chr3:163557800-163558000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
4 | chr3:163559000-163559200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
5 | chr3:163566000-163566200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
6 | chr3:163566400-163567400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
7 | chr3:163566800-163567200 | Enhancers | HUES6 Cell Line | embryonic stem cell |
8 | chr3:163567000-163567600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
9 | chr3:163567000-163567600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
10 | chr3:163577600-163578800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
11 | chr3:163582000-163582200 | Enhancers | Pancreas | Pancrea |
12 | chr3:163587200-163587400 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
13 | chr3:163595400-163596600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
14 | chr3:163599200-163599800 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
15 | chr3:163599800-163600200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
16 | chr3:163600000-163600600 | Enhancers | Pancreatic Islets | Pancreatic Islet |
17 | chr3:163606600-163608400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
18 | chr3:163606800-163607200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
19 | chr3:163607200-163608200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
20 | chr3:163608200-163608800 | Bivalent Enhancer | H9 Derived Neuron Cultured Cells | ES cell derived |
21 | chr3:163608200-163609000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
22 | chr3:163608200-163609600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
23 | chr3:163608200-163610000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
24 | chr3:163608400-163609000 | Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
25 | chr3:163608400-163609000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
26 | chr3:163608400-163609600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
27 | chr3:163608600-163609000 | Enhancers | H1 Cell Line | embryonic stem cell |
28 | chr3:163608800-163609000 | Bivalent Enhancer | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
29 | chr3:163610000-163611600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
30 | chr3:163611600-163611800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
31 | chr3:163615400-163615800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
32 | chr3:163622000-163622200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
33 | chr3:163622200-163623400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
34 | chr3:163623400-163624600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
35 | chr3:163623600-163624200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
36 | chr3:163623800-163624400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
37 | chr3:163623800-163624600 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
38 | chr3:163624200-163625200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
39 | chr3:163624400-163625800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
40 | chr3:163624600-163625200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
41 | chr3:163625200-163625400 | Enhancers | HUES48 Cell Line | embryonic stem cell |
42 | chr3:163625200-163628400 | Active TSS | iPS-18 Cell Line | embryonic stem cell |
43 | chr3:163625800-163626600 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
44 | chr3:163626200-163627000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
45 | chr3:163626600-163627600 | Active TSS | HUES6 Cell Line | embryonic stem cell |
46 | chr3:163627000-163631800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
47 | chr3:163627600-163631800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
48 | chr3:163627800-163631800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
49 | chr3:163628200-163628400 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
50 | chr3:163628400-163629800 | Transcr. at gene 5' and 3' | iPS-18 Cell Line | embryonic stem cell |