Variant report

Variant	nsv879047
Chromosome Location	chr4:59900914-60005301
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BATF	chr4:60000562-60000764	GM12878	blood:	n/a	n/a
2	CEBPB	chr4:59957078-59957161	H1-hESC	embryonic stem cell:	n/a	n/a
3	CEBPB	chr4:59988882-59989190	HepG2	liver:	n/a	chr4:59989020-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989022-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989020-59989031
4	CEBPB	chr4:59991889-59992240	A549	lung:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
5	CEBPB	chr4:59991891-59992280	ECC-1	luminal epithelium:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
6	CEBPB	chr4:59930192-59930433	HepG2	liver:	n/a	chr4:59930311-59930322
7	CEBPB	chr4:59981855-59982124	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr4:59991903-59992218	Hela-S3	cervix:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
9	CEBPB	chr4:59991899-59992256	HepG2	liver:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
10	CEBPB	chr4:59926151-59926570	ECC-1	luminal epithelium:	n/a	n/a
11	CEBPB	chr4:59911007-59911142	H1-hESC	embryonic stem cell:	n/a	chr4:59911074-59911087
12	CEBPB	chr4:59988870-59989208	IMR90	lung:	n/a	chr4:59989020-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989022-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989020-59989031
13	CEBPB	chr4:59991895-59992254	IMR90	lung:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
14	CEBPB	chr4:59981873-59982140	HepG2	liver:	n/a	n/a
15	CEBPB	chr4:59991901-59992246	H1-hESC	embryonic stem cell:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
16	CEBPB	chr4:59923518-59923902	A549	lung:	n/a	n/a
17	CEBPB	chr4:59923562-59923867	HepG2	liver:	n/a	n/a
18	CEBPB	chr4:59981851-59982147	A549	lung:	n/a	n/a
19	CEBPB	chr4:59963316-59963362	K562	blood:	n/a	n/a
20	CEBPB	chr4:59968474-59968675	HepG2	liver:	n/a	n/a
21	CEBPB	chr4:59926170-59926547	ECC-1	luminal epithelium:	n/a	n/a
22	CEBPB	chr4:59963157-59963401	HepG2	liver:	n/a	chr4:59963289-59963300
23	CEBPB	chr4:59963185-59963406	A549	lung:	n/a	chr4:59963289-59963300
24	CEBPB	chr4:59967897-59967945	A549	lung:	n/a	n/a
25	CEBPB	chr4:59988912-59989167	A549	lung:	n/a	chr4:59989020-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989022-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989020-59989031
26	CEBPB	chr4:59923489-59923985	A549	lung:	n/a	n/a
27	CEBPB	chr4:59988954-59989151	H1-hESC	embryonic stem cell:	n/a	chr4:59989020-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989022-59989033 chr4:59989022-59989031 chr4:59989022-59989031 chr4:59989020-59989031
28	CEBPB	chr4:59923602-59923884	MCF-7	breast:	n/a	n/a
29	CEBPB	chr4:59925618-59926106	ECC-1	luminal epithelium:	n/a	n/a
30	CEBPB	chr4:59991966-59992249	K562	blood:	n/a	chr4:59992073-59992082 chr4:59992073-59992082 chr4:59992071-59992084 chr4:59992073-59992082 chr4:59992071-59992082
31	CEBPB	chr4:59987825-59987886	H1-hESC	embryonic stem cell:	n/a	chr4:59987850-59987863 chr4:59987850-59987861
32	CEBPB	chr4:59923445-59923978	MCF-7	breast:	n/a	n/a
33	CEBPB	chr4:59930191-59930393	A549	lung:	n/a	chr4:59930311-59930322
34	CHD1	chr4:59983408-59983429	H1-hESC	embryonic stem cell:	n/a	n/a
35	CTCF	chr4:59926660-59926810	GM12875	blood:	n/a	n/a
36	CTCF	chr4:59960360-59960510	Caco-2	colon:	n/a	chr4:59960397-59960415 chr4:59960399-59960420
37	CTCF	chr4:59960360-59960510	RPTEC	kidney:	n/a	chr4:59960397-59960415 chr4:59960399-59960420
38	CTCF	chr4:59960320-59960470	WERI-Rb-1	eye:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
39	CTCF	chr4:59926899-59926902	GM13977	blood:	n/a	n/a
40	CTCF	chr4:59987840-59987990	GM06990	blood:	n/a	n/a
41	CTCF	chr4:59976994-59976997	GM10266	blood:	n/a	n/a
42	CTCF	chr4:59926740-59926890	HEK293	kidney:	n/a	n/a
43	CTCF	chr4:59960320-59960470	HEK293	kidney:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
44	CTCF	chr4:59960360-59960510	HepG2	liver:	n/a	chr4:59960397-59960415 chr4:59960399-59960420
45	CTCF	chr4:59960309-59960473	MCF-7	breast:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
46	CTCF	chr4:59926760-59926910	A549	lung:	n/a	n/a
47	CTCF	chr4:59960300-59960450	HepG2	liver:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
48	CTCF	chr4:59960307-59960458	MCF-7	breast:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
49	CTCF	chr4:59960284-59960485	GM12878	blood:	n/a	chr4:59960397-59960415 chr4:59960336-59960344 chr4:59960399-59960420
50	CTCF	chr4:59976963-59976993	GM10266	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:60001000-60001050	RPTEC	kidney:	n/a
2	chr4:60001000-60001050	RPTEC	kidney:	n/a
3	chr4:60001000-60001050	AoSMC	blood vessel:	n/a
4	chr4:60001000-60001050	HIPEpiC	eye:	n/a
5	chr4:60001000-60001050	GM19239	blood:	n/a
6	chr4:60001000-60001050	MCF-7	breast:	n/a
7	chr4:60001000-60001050	HRPEpiC	eye:	n/a
8	chr4:60001000-60001050	SKMC	muscle:	n/a
9	chr4:60001000-60001050	PFSK-1	brain:	n/a
10	chr4:60001000-60001050	NHDF-neo	bronchial:	n/a
11	chr4:60001000-60001050	HepG2	liver:	n/a
12	chr4:60001000-60001050	MCF10A-Er-Src	breast:	n/a
13	chr4:60001000-60001050	NB4	blood:	n/a
14	chr4:60001000-60001050	BE2_C	brain:	n/a
15	chr4:60001000-60001050	NT2-D1	testis:	n/a
16	chr4:60001000-60001050	Hepatocyte	liver:	n/a
17	chr4:60001000-60001050	ovcar-3	ovarian:	n/a
18	chr4:60001000-60001050	HAEpiC	amniotic membrane:	n/a
19	chr4:60001000-60001050	HUVEC	blood vessel:	n/a
20	chr4:60001000-60001050	AG09309	skin:	n/a
21	chr4:60001000-60001050	SK-N-SH	brain:	n/a
22	chr4:60001000-60001050	Caco-2	colon:	n/a
23	chr4:60001000-60001050	U87	brain:	n/a
24	chr4:60001000-60001050	HL-60	blood:	n/a
25	chr4:60001000-60001050	HCPEpiC	choroid plexus:	n/a
26	chr4:60001000-60001050	IMR90	lung:	fetal
27	chr4:60001000-60001050	CMK	blood:	n/a
28	chr4:60001000-60001050	GM06990	blood:	n/a
29	chr4:60001000-60001050	AG09319	gingival:	n/a
30	chr4:60001000-60001050	NHBE	bronchial:	n/a
31	chr4:60001000-60001050	HEEpiC	esophagus:	n/a
32	chr4:60001000-60001050	PrEC	prostate:	n/a
33	chr4:60001000-60001050	SK-N-MC	brain:	n/a
34	chr4:60001000-60001050	GM12891	blood:	n/a
35	chr4:60001000-60001050	HMEC	breast:	n/a
36	chr4:60001000-60001050	Jurkat	blood:	n/a
37	chr4:60001000-60001050	A549	lung:	n/a
38	chr4:60001000-60001050	AG04449	skin:	fetal
39	chr4:60001000-60001050	PANC-1	pancreas:	n/a
40	chr4:60001000-60001050	Hela-S3	cervix:	n/a
41	chr4:60001000-60001050	AG04450	lung:	fetal
42	chr4:60001000-60001050	LNCaP	prostate:	n/a
43	chr4:60001000-60001050	HEK293	kidney:	embryo
44	chr4:60001000-60001050	AG10803	skin:	n/a
45	chr4:60001000-60001050	ECC-1	luminal epithelium:	n/a
46	chr4:60001000-60001050	HPAEpiC	pulmonary alveolar:	n/a
47	chr4:60001000-60001050	NH-A	brain:	n/a
48	chr4:60001000-60001050	ProgFib	skin:	n/a
49	chr4:60001000-60001050	HCF	heart:	n/a
50	chr4:60001000-60001050	K562	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:59915929..59917798-chr4:59918941..59921861,2	MCF-7	breast:
2	chr4:59909700..59911681-chr4:59912339..59914598,2	MCF-7	breast:
3	chr4:59959700..59961456-chr4:59961992..59964536,2	MCF-7	breast:
4	chr4:59915929..59917798-chr4:59918941..59921861,2	MCF-7	breast:
5	chr4:59952219..59954148-chr4:59969899..59971579,2	K562	blood:
6	chr4:59909700..59911681-chr4:59912339..59914598,2	MCF-7	breast:
7	chr4:59952219..59954148-chr4:59969899..59971579,2	K562	blood:
8	chr4:59959700..59961456-chr4:59961992..59964536,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IGFBP7-6	chr4:59912738-59912778	ENSG00000250375
2	lnc-POLR2B-6	chr4:59912141-59912675	XLOC_003551
3	lnc-IGFBP7-6	chr4:59940898-59940960	XLOC_003963
4	lnc-POLR2B-6	chr4:59906305-59906409	XLOC_003551
5	lnc-POLR2B-6	chr4:59912141-59912677	XLOC_003551
6	lnc-IGFBP7-6	chr4:59912738-59912778	XLOC_003963
7	lnc-IGFBP7-6	chr4:59913667-59913853	ENSG00000250375
8	lnc-IGFBP7-6	chr4:59913667-59913853	XLOC_003963
9	lnc-IGFBP7-6	chr4:59940898-59940974	ENSG00000250375

Variant related genes	Relation type
ENSG00000250375	TF binding region
ENSG00000250375	CpG island
PLP2	miRNA target sites
PLRG1	miRNA target sites

Extended variants
information (count: 1108 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:1108 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs73819924	chr4:59903621-59903622	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs532186941	chr4:59903672-59903673	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs547454122	chr4:59903690-59903691	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs371121724	chr4:59903784-59903785	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs140896926	chr4:59903815-59903816	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs567011382	chr4:59903816-59903817	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs530088350	chr4:59903822-59903823	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs548330755	chr4:59903823-59903824	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs570323561	chr4:59903874-59903875	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs370408881	chr4:59903903-59903904	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs10014988	chr4:59903904-59903905	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs144837087	chr4:59903920-59903921	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs10014993	chr4:59903929-59903930	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs535253386	chr4:59904069-59904070	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs201917888	chr4:59904100-59904101	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs138752746	chr4:59904133-59904134	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs140365365	chr4:59904147-59904148	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs546973167	chr4:59904150-59904151	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs536234856	chr4:59904161-59904162	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs571134159	chr4:59904170-59904171	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs566852420	chr4:59904173-59904174	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs575994478	chr4:59904178-59904179	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs62298295	chr4:59904207-59904208	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs112631232	chr4:59904226-59904227	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs571556349	chr4:59904227-59904228	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs539085283	chr4:59904241-59904242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs145425883	chr4:59904245-59904246	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs77069371	chr4:59904253-59904254	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs398092407	chr4:59904254-59904255	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs73819925	chr4:59904257-59904258	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs559787030	chr4:59904274-59904275	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs137999850	chr4:59904299-59904300	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs548663657	chr4:59904303-59904304	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs34633049	chr4:59904315-59904316	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs563493539	chr4:59904338-59904339	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs115917874	chr4:59904379-59904380	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs118088261	chr4:59904392-59904393	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs189553470	chr4:59906309-59906310	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs13111434	chr4:59906337-59906338	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
40	rs551194644	chr4:59906346-59906347	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs562223432	chr4:59906360-59906361	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs141020194	chr4:59906378-59906379	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs149321350	chr4:59910006-59910007	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs559451758	chr4:59910016-59910017	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs79672848	chr4:59910030-59910031	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs548876668	chr4:59910045-59910046	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs570396430	chr4:59910089-59910090	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs531116493	chr4:59910103-59910104	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs552850242	chr4:59910156-59910157	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs571027991	chr4:59910218-59910219	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Lung cancer	18438408	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	21922591	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Parkinson disease	21956041	CNVD
Mental retardation	20522426	CNVD
delayed speech	20522426	CNVD
growth disorder	20522426	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Multiple myeloma	16616336	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Colorectal cancer	16272173	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
small cell lung cancer	20016488	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute monocytic leukemia	16498392	CNVD
Prostate cancer	16573809	CNVD
Osteoporosis	18992858	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:63 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:59903600-59904000	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr4:59903600-59904200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:59903600-59904400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr4:59910000-59910400	Enhancers	Fetal Kidney	kidney
5	chr4:59916400-59916800	Enhancers	HMEC	breast
6	chr4:59925800-59926200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr4:59925800-59926400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr4:59926000-59926400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr4:59926400-59927000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr4:59928800-59929400	Enhancers	Fetal Heart	heart
11	chr4:59929000-59930400	Enhancers	Placenta Amnion	Placenta Amnion
12	chr4:59934400-59935400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr4:59952200-59952600	Enhancers	Brain Hippocampus Middle	brain
14	chr4:59952600-59953000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr4:59957000-59957200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr4:59957000-59958000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr4:59957000-59958200	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr4:59957200-59957400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr4:59957200-59957600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:59957200-59957600	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr4:59957200-59957800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr4:59957200-59958000	Enhancers	H1 Cell Line	embryonic stem cell
23	chr4:59957200-59958200	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr4:59957400-59958000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr4:59957800-59958200	Enhancers	iPS-20b Cell Line	embryonic stem cell
26	chr4:59963600-59964200	Active TSS	A549	lung
27	chr4:59975800-59977600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr4:59977600-59977800	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr4:59985000-59986200	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr4:59985000-59987200	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr4:59985400-59987000	Enhancers	iPS-18 Cell Line	embryonic stem cell
32	chr4:59986000-59986400	Enhancers	ES-I3 Cell Line	embryonic stem cell
33	chr4:59986200-59987000	Enhancers	A549	lung
34	chr4:59986200-59988200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr4:59986400-59986800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr4:59986400-59987200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr4:59986800-59987000	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr4:59986800-59987000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr4:59987000-59988200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
40	chr4:59987000-59991000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr4:59987200-59988200	Weak transcription	HUES48 Cell Line	embryonic stem cell
42	chr4:59987200-59990800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr4:59988200-59988400	Enhancers	HUES48 Cell Line	embryonic stem cell
44	chr4:59988200-59988400	Enhancers	iPS-15b Cell Line	embryonic stem cell
45	chr4:59988200-59988600	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr4:59990800-59991200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr4:59991000-59991200	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr4:59991200-59992200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr4:59992200-59993800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr4:59992200-59995000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links