Variant report

Variant nsv879338
Chromosome Location chr4:69414944-69556770
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:226 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:69409200-69418800 Weak transcription Liver Liver
2 chr4:69413600-69418800 Strong transcription Rectal Mucosa Donor 31 rectum
3 chr4:69417200-69418400 Enhancers NHEK skin
4 chr4:69417800-69418200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:69417800-69419200 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr4:69417800-69420600 Enhancers HepG2 liver
7 chr4:69418600-69419200 Enhancers HUES64 Cell Line embryonic stem cell
8 chr4:69418800-69419200 Enhancers Liver Liver
9 chr4:69418800-69421800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr4:69420600-69421000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr4:69421000-69423400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr4:69421600-69423000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
13 chr4:69421800-69422200 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr4:69421800-69422600 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr4:69422200-69430400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr4:69422400-69422800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr4:69422600-69431200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:69427200-69427400 Enhancers Liver Liver
19 chr4:69427400-69433200 Weak transcription Liver Liver
20 chr4:69429200-69439800 Weak transcription Right Atrium heart
21 chr4:69430400-69430800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr4:69431200-69431400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr4:69431200-69431600 Enhancers HMEC breast
24 chr4:69431400-69434600 Active TSS Rectal Mucosa Donor 31 rectum
25 chr4:69432800-69434200 Active TSS Duodenum Mucosa Duodenum
26 chr4:69433200-69433400 Flanking Active TSS Liver Liver
27 chr4:69433400-69434000 Active TSS Liver Liver
28 chr4:69434000-69435000 Weak transcription Liver Liver
29 chr4:69434200-69439200 Weak transcription Duodenum Mucosa Duodenum
30 chr4:69434600-69435200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr4:69435000-69436200 Enhancers Liver Liver
32 chr4:69435200-69435800 Enhancers Small Intestine intestine
33 chr4:69435200-69436000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr4:69435200-69438000 Enhancers Rectal Mucosa Donor 31 rectum
35 chr4:69435400-69435800 Enhancers Primary B cells from peripheral blood blood
36 chr4:69435600-69436200 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr4:69435800-69436800 Weak transcription Primary B cells from peripheral blood blood
38 chr4:69436000-69441800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:69436200-69446600 Weak transcription Liver Liver
40 chr4:69436800-69439000 Enhancers Primary B cells from peripheral blood blood
41 chr4:69438000-69438400 Active TSS Rectal Mucosa Donor 31 rectum
42 chr4:69438400-69439800 Enhancers Rectal Mucosa Donor 31 rectum
43 chr4:69439000-69441000 Weak transcription Primary B cells from peripheral blood blood
44 chr4:69439200-69439400 Enhancers Duodenum Mucosa Duodenum
45 chr4:69439400-69448200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr4:69439600-69440000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
47 chr4:69441000-69443000 Enhancers Primary B cells from peripheral blood blood
48 chr4:69441800-69442000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr4:69446600-69448000 Enhancers Liver Liver
50 chr4:69447400-69448000 Enhancers NHEK skin

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