Variant report

Variant	nsv879642
Chromosome Location	chr4:98317295-98569259
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr4:98419887-98420492	HCT-116	colon:	n/a	n/a
2	ATF3	chr4:98419975-98420488	HCT-116	colon:	n/a	n/a
3	BACH1	chr4:98420053-98420303	H1-hESC	embryonic stem cell:	n/a	chr4:98420142-98420156
4	BCL3	chr4:98508998-98509375	GM12878	blood:	n/a	n/a
5	BHLHE40	chr4:98421683-98421883	GM12878	blood:	n/a	n/a
6	CBX3	chr4:98419861-98420515	HCT-116	colon:	n/a	n/a
7	CBX3	chr4:98417471-98418225	HCT-116	colon:	n/a	n/a
8	CBX3	chr4:98419866-98420528	HCT-116	colon:	n/a	n/a
9	CCNT2	chr4:98381841-98382041	K562	blood:	n/a	n/a
10	CEBPB	chr4:98361205-98361386	A549	lung:	n/a	chr4:98361251-98361262
11	CEBPB	chr4:98417526-98417894	H1-hESC	embryonic stem cell:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
12	CEBPB	chr4:98400558-98400870	IMR90	lung:	n/a	chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400583-98400596 chr4:98400703-98400714 chr4:98400705-98400714 chr4:98400703-98400716
13	CEBPB	chr4:98510992-98511342	MCF-7	breast:	n/a	n/a
14	CEBPB	chr4:98539434-98539658	HepG2	liver:	n/a	chr4:98539512-98539523
15	CEBPB	chr4:98550602-98550799	H1-hESC	embryonic stem cell:	n/a	n/a
16	CEBPB	chr4:98417396-98418127	HCT-116	colon:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
17	CEBPB	chr4:98378325-98378734	MCF-7	breast:	n/a	n/a
18	CEBPB	chr4:98550616-98550860	A549	lung:	n/a	n/a
19	CEBPB	chr4:98417464-98417940	ECC-1	luminal epithelium:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
20	CEBPB	chr4:98511464-98511776	MCF-7	breast:	n/a	n/a
21	CEBPB	chr4:98467897-98468197	IMR90	lung:	n/a	chr4:98468073-98468084
22	CEBPB	chr4:98539500-98539574	H1-hESC	embryonic stem cell:	n/a	chr4:98539512-98539523
23	CEBPB	chr4:98415862-98416120	HepG2	liver:	n/a	chr4:98416021-98416032 chr4:98416020-98416033
24	CEBPB	chr4:98419795-98420651	HCT-116	colon:	n/a	n/a
25	CEBPB	chr4:98361249-98361274	H1-hESC	embryonic stem cell:	n/a	chr4:98361251-98361262
26	CEBPB	chr4:98357227-98357418	A549	lung:	n/a	chr4:98357275-98357292
27	CEBPB	chr4:98334349-98334609	HepG2	liver:	n/a	chr4:98334483-98334494
28	CEBPB	chr4:98503368-98503620	HepG2	liver:	n/a	chr4:98503500-98503511 chr4:98503499-98503512
29	CEBPB	chr4:98467950-98468187	HepG2	liver:	n/a	chr4:98468073-98468084
30	CEBPB	chr4:98419955-98420451	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr4:98417419-98418098	A549	lung:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
32	CEBPB	chr4:98420213-98420360	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr4:98420047-98420415	MCF-7	breast:	n/a	n/a
34	CEBPB	chr4:98426750-98427060	HepG2	liver:	n/a	chr4:98426906-98426915 chr4:98426904-98426915 chr4:98426905-98426916
35	CEBPB	chr4:98415901-98416161	A549	lung:	n/a	chr4:98416021-98416032 chr4:98416020-98416033
36	CEBPB	chr4:98426805-98427085	A549	lung:	n/a	chr4:98426906-98426915 chr4:98426904-98426915 chr4:98426905-98426916
37	CEBPB	chr4:98419853-98420528	A549	lung:	n/a	n/a
38	CEBPB	chr4:98551808-98552192	Hela-S3	cervix:	n/a	n/a
39	CEBPB	chr4:98417536-98417949	A549	lung:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
40	CEBPB	chr4:98419946-98420588	HCT-116	colon:	n/a	n/a
41	CEBPB	chr4:98510925-98511719	MCF-7	breast:	n/a	n/a
42	CEBPB	chr4:98400579-98400890	HepG2	liver:	n/a	chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400583-98400596 chr4:98400703-98400714 chr4:98400705-98400714 chr4:98400703-98400716
43	CEBPB	chr4:98417537-98418092	Hela-S3	cervix:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
44	CEBPB	chr4:98420005-98420453	A549	lung:	n/a	n/a
45	CEBPB	chr4:98420044-98420447	MCF-7	breast:	n/a	n/a
46	CEBPB	chr4:98503490-98503558	H1-hESC	embryonic stem cell:	n/a	chr4:98503500-98503511 chr4:98503499-98503512
47	CEBPB	chr4:98419984-98420473	A549	lung:	n/a	n/a
48	CEBPB	chr4:98357248-98357445	IMR90	lung:	n/a	chr4:98357275-98357292
49	CEBPB	chr4:98417488-98417912	ECC-1	luminal epithelium:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
50	CEBPB	chr4:98361102-98361428	HepG2	liver:	n/a	chr4:98361251-98361262 chr4:98361144-98361157

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:98479820-98479870	K562	blood:	n/a
2	chr4:98479820-98479870	HCPEpiC	choroid plexus:	n/a
3	chr4:98479820-98479870	NHDF-neo	bronchial:	n/a
4	chr4:98479820-98479870	Hela-S3	cervix:	n/a
5	chr4:98479820-98479870	IMR90	lung:	fetal
6	chr4:98479820-98479870	NH-A	brain:	n/a
7	chr4:98479820-98479870	SAEC	small airway:	n/a
8	chr4:98479820-98479870	GM19239	blood:	n/a
9	chr4:98479820-98479870	GM12891	blood:	n/a
10	chr4:98479820-98479870	BJ	skin:	n/a
11	chr4:98479820-98479870	HRPEpiC	eye:	n/a
12	chr4:98479820-98479870	SK-N-MC	brain:	n/a
13	chr4:98479820-98479870	PrEC	prostate:	n/a
14	chr4:98479820-98479870	HepG2	liver:	n/a
15	chr4:98479820-98479870	AG09319	gingival:	n/a
16	chr4:98479820-98479870	HRE	kidney:	n/a
17	chr4:98479820-98479870	SKMC	muscle:	n/a
18	chr4:98479820-98479870	RPTEC	kidney:	n/a
19	chr4:98479820-98479870	NHBE	bronchial:	n/a
20	chr4:98479820-98479870	HUVEC	blood vessel:	n/a
21	chr4:98479820-98479870	A549	lung:	n/a
22	chr4:98479820-98479870	HRCEpiC	kidney:	n/a
23	chr4:98479820-98479870	Jurkat	blood:	n/a
24	chr4:98479820-98479870	AG04449	skin:	fetal
25	chr4:98479820-98479870	HPAEpiC	pulmonary alveolar:	n/a
26	chr4:98479820-98479870	HEEpiC	esophagus:	n/a
27	chr4:98479820-98479870	HCF	heart:	n/a
28	chr4:98479820-98479870	HEK293	kidney:	embryo
29	chr4:98479820-98479870	T-47D	breast:	n/a
30	chr4:98479820-98479870	AG04450	lung:	fetal
31	chr4:98479820-98479870	HL-60	blood:	n/a
32	chr4:98479820-98479870	Caco-2	colon:	n/a
33	chr4:98479820-98479870	AG09309	skin:	n/a
34	chr4:98479820-98479870	HAEpiC	amniotic membrane:	n/a
35	chr4:98479820-98479870	HCT-116	colon:	n/a
36	chr4:98479820-98479870	BE2_C	brain:	n/a
37	chr4:98479820-98479870	HCM	heart:	n/a
38	chr4:98479820-98479870	CMK	blood:	n/a
39	chr4:98479820-98479870	MCF-7	breast:	n/a
40	chr4:98479820-98479870	NT2-D1	testis:	n/a
41	chr4:98479820-98479870	MCF10A-Er-Src	breast:	n/a
42	chr4:98479820-98479870	HIPEpiC	eye:	n/a
43	chr4:98479820-98479870	AG10803	skin:	n/a
44	chr4:98479820-98479870	HMEC	breast:	n/a
45	chr4:98479820-98479870	ECC-1	luminal epithelium:	n/a
46	chr4:98479820-98479870	ovcar-3	ovarian:	n/a
47	chr4:98479820-98479870	HNPCEpiC	eye:	n/a
48	chr4:98479820-98479870	Hepatocyte	liver:	n/a
49	chr4:98479820-98479870	ProgFib	skin:	n/a
50	chr4:98479820-98479870	U87	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:98562115..98565020-chr4:98567699..98570313,2	MCF-7	breast:
2	chr4:98417634..98419230-chr4:98419373..98421465,2	MCF-7	breast:
3	chr4:98392071..98393852-chr4:98399439..98402050,2	K562	blood:
4	chr4:98401691..98403419-chr4:98441466..98443377,2	K562	blood:
5	chr4:98547951..98550382-chr4:98550750..98552792,2	MCF-7	breast:
6	chr4:98401691..98403419-chr4:98441466..98443377,2	K562	blood:
7	chr4:98326975..98329466-chr4:98330567..98333090,2	MCF-7	breast:
8	chr4:98522959..98525428-chr4:98528956..98531903,2	K562	blood:
9	chr4:98356561..98358101-chr4:98363641..98366238,2	MCF-7	breast:
10	chr4:98562115..98565020-chr4:98567699..98570313,2	MCF-7	breast:
11	chr4:98417634..98419230-chr4:98419373..98421465,2	MCF-7	breast:
12	chr4:98326975..98329466-chr4:98330567..98333090,2	MCF-7	breast:
13	chr4:98522959..98525428-chr4:98528956..98531903,2	K562	blood:
14	chr4:98505232..98506917-chr4:98508304..98511467,3	MCF-7	breast:
15	chr4:98547951..98550382-chr4:98550750..98552792,2	MCF-7	breast:
16	chr4:98505232..98506917-chr4:98508304..98511467,3	MCF-7	breast:
17	chr4:98392071..98393852-chr4:98399439..98402050,2	K562	blood:
18	chr4:98123649..98126373-chr4:98396261..98399179,2	MCF-7	breast:
19	chr4:98356561..98358101-chr4:98363641..98366238,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAP1GDS1-4	chr4:98411147-98411315	ENSG00000251620.1
2	lnc-RAP1GDS1-4	chr4:98362561-98362710	ENSG00000251620.1
3	lnc-RAP1GDS1-4	chr4:98384696-98384743	ENSG00000251620.1
4	lnc-RAP1GDS1-4	chr4:98410925-98410963	ENSG00000251620.1
5	lnc-RAP1GDS1-4	chr4:98360505-98360572	ENSG00000251620.1

Variant related genes	Relation type
ENSG00000271995	TF binding region
ENSG00000254044	TF binding region
ENSG00000271995	CpG island
ENSG00000254044	CpG island

Extended variants
information (count: 4197 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:4197 , 50 per page) page: 1 2 3 4 5 6 7 ... 84

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs965407	chr4:98317295-98317296	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs542515676	chr4:98317298-98317299	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs113583211	chr4:98317360-98317361	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs139070009	chr4:98317400-98317401	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs552490614	chr4:98317402-98317403	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs185633428	chr4:98317408-98317409	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs532060802	chr4:98317431-98317432	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs114932184	chr4:98317529-98317530	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs115917273	chr4:98317594-98317595	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs539902331	chr4:98317707-98317708	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs116201065	chr4:98317712-98317713	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs554808070	chr4:98317735-98317736	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs566643463	chr4:98317736-98317737	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs549716142	chr4:98317817-98317818	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs558452334	chr4:98317821-98317822	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs577145227	chr4:98317856-98317857	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs538309641	chr4:98317858-98317859	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs142973462	chr4:98317874-98317875	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs573174351	chr4:98317905-98317906	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs574840895	chr4:98317908-98317909	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs541870775	chr4:98317915-98317916	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs560577821	chr4:98317917-98317918	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs75110793	chr4:98317987-98317988	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs114580216	chr4:98318067-98318068	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs115507910	chr4:98318083-98318084	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs564486243	chr4:98318119-98318120	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs147028486	chr4:98318197-98318198	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs550213036	chr4:98318261-98318262	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs562253076	chr4:98318263-98318264	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs138406993	chr4:98318266-98318267	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs72885528	chr4:98318299-98318300	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs566491446	chr4:98318333-98318334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs111768281	chr4:98318340-98318341	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs370174628	chr4:98318341-98318342	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs190086633	chr4:98318343-98318344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs60147005	chr4:98318355-98318356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs181737226	chr4:98318357-98318358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs144044413	chr4:98318361-98318362	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs538043175	chr4:98318381-98318382	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs556656898	chr4:98318387-98318388	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs187240764	chr4:98318476-98318477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs535969694	chr4:98318496-98318497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs553861312	chr4:98318524-98318525	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs572418170	chr4:98318568-98318569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs148664322	chr4:98318573-98318574	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs191909434	chr4:98318599-98318600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs576186871	chr4:98318625-98318626	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543599762	chr4:98318636-98318637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs538684497	chr4:98318654-98318655	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs529720231	chr4:98318689-98318690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Cancer	19907438	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	19197363	CNVD
Melanoma	20688739	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:329 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:98317000-98318200	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr4:98317200-98317400	Enhancers	A549	lung
3	chr4:98317200-98318000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr4:98317200-98318200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
5	chr4:98317400-98325400	Weak transcription	A549	lung
6	chr4:98324800-98325000	Enhancers	Liver	Liver
7	chr4:98325000-98325200	Flanking Active TSS	Liver	Liver
8	chr4:98325200-98325600	Active TSS	Liver	Liver
9	chr4:98325200-98325800	Enhancers	Dnd41	blood
10	chr4:98325400-98325600	Enhancers	A549	lung
11	chr4:98325600-98326200	Enhancers	Liver	Liver
12	chr4:98325600-98326200	Weak transcription	A549	lung
13	chr4:98326200-98327000	Enhancers	A549	lung
14	chr4:98326200-98332800	Weak transcription	Liver	Liver
15	chr4:98332400-98332800	Enhancers	Ovary	ovary
16	chr4:98332800-98334600	Enhancers	Liver	Liver
17	chr4:98335400-98335800	Active TSS	Fetal Heart	heart
18	chr4:98358400-98358600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr4:98358400-98359600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr4:98358600-98359600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr4:98359600-98359800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr4:98359600-98359800	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr4:98359600-98359800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr4:98359800-98368600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr4:98359800-98368600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr4:98368200-98369200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
27	chr4:98368600-98369000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
28	chr4:98368600-98369200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr4:98368600-98369200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr4:98369000-98369400	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr4:98369200-98373400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr4:98369200-98374400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr4:98369400-98372200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr4:98372400-98374600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
35	chr4:98373000-98373400	ZNF genes & repeats	HSMM	muscle
36	chr4:98373400-98373600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
37	chr4:98373400-98374600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr4:98373400-98377800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
39	chr4:98374400-98374600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr4:98374400-98374600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr4:98374400-98374600	ZNF genes & repeats	Pancreas	Pancrea
42	chr4:98374600-98376400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr4:98374600-98378400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr4:98376400-98376600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr4:98377400-98378400	Enhancers	Liver	Liver
46	chr4:98377800-98378000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr4:98378200-98378400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
48	chr4:98378200-98379000	Enhancers	ES-I3 Cell Line	embryonic stem cell
49	chr4:98378200-98379000	Enhancers	iPS-15b Cell Line	embryonic stem cell
50	chr4:98378200-98379400	Enhancers	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links