Variant report

Variant	nsv879646
Chromosome Location	chr4:98386631-98569259
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr4:98419975-98420488	HCT-116	colon:	n/a	n/a
2	ATF3	chr4:98419887-98420492	HCT-116	colon:	n/a	n/a
3	BACH1	chr4:98420053-98420303	H1-hESC	embryonic stem cell:	n/a	chr4:98420142-98420156
4	BCL3	chr4:98508998-98509375	GM12878	blood:	n/a	n/a
5	BHLHE40	chr4:98421683-98421883	GM12878	blood:	n/a	n/a
6	CBX3	chr4:98419866-98420528	HCT-116	colon:	n/a	n/a
7	CBX3	chr4:98417471-98418225	HCT-116	colon:	n/a	n/a
8	CBX3	chr4:98419861-98420515	HCT-116	colon:	n/a	n/a
9	CEBPB	chr4:98400579-98400890	HepG2	liver:	n/a	chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400583-98400596 chr4:98400703-98400714 chr4:98400705-98400714 chr4:98400703-98400716
10	CEBPB	chr4:98419853-98420528	A549	lung:	n/a	n/a
11	CEBPB	chr4:98511464-98511776	MCF-7	breast:	n/a	n/a
12	CEBPB	chr4:98467897-98468197	IMR90	lung:	n/a	chr4:98468073-98468084
13	CEBPB	chr4:98510925-98511719	MCF-7	breast:	n/a	n/a
14	CEBPB	chr4:98419795-98420651	HCT-116	colon:	n/a	n/a
15	CEBPB	chr4:98550616-98550860	A549	lung:	n/a	n/a
16	CEBPB	chr4:98420005-98420453	A549	lung:	n/a	n/a
17	CEBPB	chr4:98420047-98420415	MCF-7	breast:	n/a	n/a
18	CEBPB	chr4:98551808-98552192	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr4:98419946-98420588	HCT-116	colon:	n/a	n/a
20	CEBPB	chr4:98417419-98418098	A549	lung:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
21	CEBPB	chr4:98467950-98468187	HepG2	liver:	n/a	chr4:98468073-98468084
22	CEBPB	chr4:98415862-98416120	HepG2	liver:	n/a	chr4:98416021-98416032 chr4:98416020-98416033
23	CEBPB	chr4:98417537-98418092	Hela-S3	cervix:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
24	CEBPB	chr4:98426805-98427085	A549	lung:	n/a	chr4:98426906-98426915 chr4:98426904-98426915 chr4:98426905-98426916
25	CEBPB	chr4:98539434-98539658	HepG2	liver:	n/a	chr4:98539512-98539523
26	CEBPB	chr4:98420213-98420360	H1-hESC	embryonic stem cell:	n/a	n/a
27	CEBPB	chr4:98417519-98417952	A549	lung:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
28	CEBPB	chr4:98503490-98503558	H1-hESC	embryonic stem cell:	n/a	chr4:98503500-98503511 chr4:98503499-98503512
29	CEBPB	chr4:98417464-98417940	ECC-1	luminal epithelium:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
30	CEBPB	chr4:98417526-98417894	H1-hESC	embryonic stem cell:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
31	CEBPB	chr4:98539500-98539574	H1-hESC	embryonic stem cell:	n/a	chr4:98539512-98539523
32	CEBPB	chr4:98417396-98418127	HCT-116	colon:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
33	CEBPB	chr4:98420044-98420447	MCF-7	breast:	n/a	n/a
34	CEBPB	chr4:98419984-98420473	A549	lung:	n/a	n/a
35	CEBPB	chr4:98503368-98503620	HepG2	liver:	n/a	chr4:98503500-98503511 chr4:98503499-98503512
36	CEBPB	chr4:98426750-98427060	HepG2	liver:	n/a	chr4:98426906-98426915 chr4:98426904-98426915 chr4:98426905-98426916
37	CEBPB	chr4:98400558-98400870	IMR90	lung:	n/a	chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400705-98400714 chr4:98400583-98400596 chr4:98400703-98400714 chr4:98400705-98400714 chr4:98400703-98400716
38	CEBPB	chr4:98415901-98416161	A549	lung:	n/a	chr4:98416021-98416032 chr4:98416020-98416033
39	CEBPB	chr4:98419955-98420451	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr4:98417536-98417949	A549	lung:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
41	CEBPB	chr4:98510992-98511342	MCF-7	breast:	n/a	n/a
42	CEBPB	chr4:98417488-98417912	ECC-1	luminal epithelium:	n/a	chr4:98417706-98417717 chr4:98417704-98417717 chr4:98417704-98417717
43	CEBPB	chr4:98550602-98550799	H1-hESC	embryonic stem cell:	n/a	n/a
44	CHD1	chr4:98522881-98522890	GM12878	blood:	n/a	n/a
45	CTCF	chr4:98470270-98470480	GM12878	blood:	n/a	n/a
46	CTCF	chr4:98492982-98493028	Lung_OC	lung:	n/a	n/a
47	CTCF	chr4:98470244-98470434	HUVEC	blood vessel:	n/a	n/a
48	CTCF	chr4:98470332-98470380	LNCaP	prostate:	n/a	n/a
49	CTCF	chr4:98528780-98528930	MCF-7	breast:	n/a	n/a
50	CTCF	chr4:98470240-98470390	HEEpiC	esophagus:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:98479820-98479870	HEK293	kidney:	embryo
2	chr4:98479820-98479870	ProgFib	skin:	n/a
3	chr4:98479820-98479870	HRE	kidney:	n/a
4	chr4:98479820-98479870	Caco-2	colon:	n/a
5	chr4:98479820-98479870	ECC-1	luminal epithelium:	n/a
6	chr4:98479820-98479870	LNCaP	prostate:	n/a
7	chr4:98479820-98479870	HNPCEpiC	eye:	n/a
8	chr4:98479820-98479870	HPAEpiC	pulmonary alveolar:	n/a
9	chr4:98479820-98479870	AoSMC	blood vessel:	n/a
10	chr4:98479820-98479870	HCF	heart:	n/a
11	chr4:98479820-98479870	SKMC	muscle:	n/a
12	chr4:98479820-98479870	NB4	blood:	n/a
13	chr4:98479820-98479870	PANC-1	pancreas:	n/a
14	chr4:98479820-98479870	MCF-7	breast:	n/a
15	chr4:98479820-98479870	K562	blood:	n/a
16	chr4:98479820-98479870	U87	brain:	n/a
17	chr4:98479820-98479870	GM19239	blood:	n/a
18	chr4:98479820-98479870	T-47D	breast:	n/a
19	chr4:98479820-98479870	GM12878	blood:	n/a
20	chr4:98479820-98479870	NH-A	brain:	n/a
21	chr4:98479820-98479870	SK-N-MC	brain:	n/a
22	chr4:98479820-98479870	NHDF-neo	bronchial:	n/a
23	chr4:98479820-98479870	GM12892	blood:	n/a
24	chr4:98479820-98479870	Jurkat	blood:	n/a
25	chr4:98479820-98479870	GM12891	blood:	n/a
26	chr4:98479820-98479870	AG09309	skin:	n/a
27	chr4:98479820-98479870	HEEpiC	esophagus:	n/a
28	chr4:98479820-98479870	HRCEpiC	kidney:	n/a
29	chr4:98479820-98479870	HCT-116	colon:	n/a
30	chr4:98479820-98479870	HAEpiC	amniotic membrane:	n/a
31	chr4:98479820-98479870	HUVEC	blood vessel:	n/a
32	chr4:98479820-98479870	NHBE	bronchial:	n/a
33	chr4:98479820-98479870	RPTEC	kidney:	n/a
34	chr4:98479820-98479870	HIPEpiC	eye:	n/a
35	chr4:98479820-98479870	ovcar-3	ovarian:	n/a
36	chr4:98479820-98479870	HepG2	liver:	n/a
37	chr4:98479820-98479870	BJ	skin:	n/a
38	chr4:98479820-98479870	SAEC	small airway:	n/a
39	chr4:98479820-98479870	BE2_C	brain:	n/a
40	chr4:98479820-98479870	Hela-S3	cervix:	n/a
41	chr4:98479820-98479870	AG04450	lung:	fetal
42	chr4:98479820-98479870	GM06990	blood:	n/a
43	chr4:98479820-98479870	MCF10A-Er-Src	breast:	n/a
44	chr4:98479820-98479870	CMK	blood:	n/a
45	chr4:98479820-98479870	AG10803	skin:	n/a
46	chr4:98479820-98479870	SK-N-SH	brain:	n/a
47	chr4:98479820-98479870	HCM	heart:	n/a
48	chr4:98479820-98479870	PFSK-1	brain:	n/a
49	chr4:98479820-98479870	IMR90	lung:	fetal
50	chr4:98479820-98479870	AG04449	skin:	fetal

No.	Distal block	Cell Line	Cell type
1	chr4:98123649..98126373-chr4:98396261..98399179,2	MCF-7	breast:
2	chr4:98547951..98550382-chr4:98550750..98552792,2	MCF-7	breast:
3	chr4:98522959..98525428-chr4:98528956..98531903,2	K562	blood:
4	chr4:98417634..98419230-chr4:98419373..98421465,2	MCF-7	breast:
5	chr4:98505232..98506917-chr4:98508304..98511467,3	MCF-7	breast:
6	chr4:98392071..98393852-chr4:98399439..98402050,2	K562	blood:
7	chr4:98562115..98565020-chr4:98567699..98570313,2	MCF-7	breast:
8	chr4:98505232..98506917-chr4:98508304..98511467,3	MCF-7	breast:
9	chr4:98417634..98419230-chr4:98419373..98421465,2	MCF-7	breast:
10	chr4:98522959..98525428-chr4:98528956..98531903,2	K562	blood:
11	chr4:98401691..98403419-chr4:98441466..98443377,2	K562	blood:
12	chr4:98547951..98550382-chr4:98550750..98552792,2	MCF-7	breast:
13	chr4:98562115..98565020-chr4:98567699..98570313,2	MCF-7	breast:
14	chr4:98392071..98393852-chr4:98399439..98402050,2	K562	blood:
15	chr4:98401691..98403419-chr4:98441466..98443377,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAP1GDS1-4	chr4:98411147-98411315	ENSG00000251620.1
2	lnc-RAP1GDS1-4	chr4:98410925-98410963	ENSG00000251620.1

Variant related genes	Relation type
ENSG00000271995	TF binding region
ENSG00000254044	TF binding region
ENSG00000271995	CpG island
ENSG00000254044	CpG island

Extended variants
information (count: 2408 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:2408 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs538767047	chr4:98396636-98396637	Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs142661435	chr4:98396690-98396691	Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs377312576	chr4:98396713-98396714	Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs61444843	chr4:98396730-98396731	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs112347785	chr4:98396797-98396798	Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs185274499	chr4:98396846-98396847	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs116352664	chr4:98396874-98396875	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs564775830	chr4:98396896-98396897	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs566882950	chr4:98396914-98396915	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs577259919	chr4:98396958-98396959	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs145951577	chr4:98396996-98396997	Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs534802766	chr4:98397007-98397008	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs75317346	chr4:98397019-98397020	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs560788871	chr4:98397067-98397068	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs557637204	chr4:98397073-98397074	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs571443698	chr4:98397074-98397075	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs188321004	chr4:98397077-98397078	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs139805059	chr4:98397079-98397080	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs35605242	chr4:98397097-98397098	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs181088861	chr4:98397136-98397137	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs532062318	chr4:98397149-98397150	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs200305259	chr4:98397189-98397190	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs559755523	chr4:98397208-98397209	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs111728701	chr4:98397220-98397221	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs76088961	chr4:98397244-98397245	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs536265205	chr4:98397259-98397260	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs554169492	chr4:98397264-98397265	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs566410880	chr4:98397285-98397286	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs533876556	chr4:98397308-98397309	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs573672318	chr4:98397316-98397317	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs558330066	chr4:98397324-98397325	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs114592960	chr4:98397481-98397482	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs115452733	chr4:98397489-98397490	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141670563	chr4:98397606-98397607	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs186462922	chr4:98397679-98397680	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs542223494	chr4:98397698-98397699	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs560512117	chr4:98397849-98397850	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs113979877	chr4:98397899-98397900	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs191698401	chr4:98397980-98397981	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs112402214	chr4:98398034-98398035	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs564481994	chr4:98398046-98398047	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs542204737	chr4:98398078-98398079	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs563849644	chr4:98398109-98398110	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs146220607	chr4:98398122-98398123	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs529783338	chr4:98398130-98398131	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs572815231	chr4:98398184-98398185	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs139075406	chr4:98398185-98398186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs566179974	chr4:98398194-98398195	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs533791654	chr4:98398208-98398209	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs552668215	chr4:98398259-98398260	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Parkinson disease	18923514	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	18414403	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Hirschsprung''s Disease	21712996	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Cancer	19907438	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	19197363	CNVD
Melanoma	20688739	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:261 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:98396600-98396800	Active TSS	Liver	Liver
2	chr4:98396800-98397000	Flanking Active TSS	Liver	Liver
3	chr4:98397000-98399000	Enhancers	Liver	Liver
4	chr4:98399000-98399200	Flanking Active TSS	Liver	Liver
5	chr4:98399200-98399400	Enhancers	Liver	Liver
6	chr4:98399400-98399600	Flanking Active TSS	Liver	Liver
7	chr4:98399600-98400800	Enhancers	Liver	Liver
8	chr4:98409800-98414600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:98412600-98412800	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr4:98412600-98413800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr4:98412800-98413400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr4:98412800-98413600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr4:98413000-98413200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr4:98413400-98414600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:98413400-98416000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr4:98413600-98415400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr4:98413800-98415600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr4:98414000-98415200	Enhancers	Placenta Amnion	Placenta Amnion
19	chr4:98414200-98415600	Enhancers	NH-A	brain
20	chr4:98414200-98416000	Enhancers	HMEC	breast
21	chr4:98414200-98416200	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr4:98414200-98420600	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr4:98414400-98415200	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr4:98414400-98416000	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr4:98414400-98416000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr4:98414600-98415400	Enhancers	iPS-18 Cell Line	embryonic stem cell
27	chr4:98414600-98415800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr4:98414600-98416000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr4:98414600-98420400	Enhancers	HUES48 Cell Line	embryonic stem cell
30	chr4:98414800-98415000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
31	chr4:98414800-98415800	Enhancers	NHEK	skin
32	chr4:98415000-98416000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr4:98415200-98415400	Enhancers	A549	lung
34	chr4:98415200-98415800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr4:98415200-98415800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr4:98415200-98415800	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
37	chr4:98415200-98419000	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr4:98415400-98415800	Enhancers	H9 Cell Line	embryonic stem cell
39	chr4:98415400-98415800	Flanking Active TSS	A549	lung
40	chr4:98415400-98416000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
41	chr4:98415400-98416000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
42	chr4:98415400-98419400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr4:98415600-98417400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
44	chr4:98415600-98417400	Weak transcription	NH-A	brain
45	chr4:98415800-98416000	Enhancers	H1 Cell Line	embryonic stem cell
46	chr4:98415800-98416000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr4:98415800-98416000	Enhancers	iPS-20b Cell Line	embryonic stem cell
48	chr4:98415800-98417200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr4:98415800-98417200	Weak transcription	A549	lung
50	chr4:98415800-98417400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links