Variant report

Variant	nsv879683
Chromosome Location	chr4:103785051-103916717
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1031)
CpG islands
(count:610)
Chromatin interactive
region (count:64)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1031 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:103789872-103790088	K562	blood:	n/a	chr4:103790068-103790080
2	ARID3A	chr4:103790439-103791277	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:103789864-103790082	HepG2	liver:	n/a	chr4:103790068-103790080
4	ARID3A	chr4:103792647-103792693	K562	blood:	n/a	n/a
5	ARID3A	chr4:103792150-103792270	K562	blood:	n/a	n/a
6	ARID3A	chr4:103800935-103801072	HepG2	liver:	n/a	n/a
7	ARID3A	chr4:103804800-103804839	K562	blood:	n/a	n/a
8	ARID3A	chr4:103790313-103791322	K562	blood:	n/a	n/a
9	ARID3A	chr4:103792913-103793227	K562	blood:	n/a	n/a
10	ATF1	chr4:103789769-103790888	K562	blood:	n/a	n/a
11	ATF1	chr4:103786885-103787040	K562	blood:	n/a	n/a
12	ATF2	chr4:103789739-103790136	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr4:103789692-103791226	GM12878	blood:	n/a	n/a
14	ATF2	chr4:103789531-103791034	GM12878	blood:	n/a	n/a
15	ATF2	chr4:103790165-103790719	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr4:103789508-103790225	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr4:103790357-103790663	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF3	chr4:103790287-103790607	K562	blood:	n/a	chr4:103790479-103790488 chr4:103790481-103790490 chr4:103790449-103790469
19	ATF3	chr4:103790112-103790670	GM12878	blood:	n/a	chr4:103790479-103790488 chr4:103790481-103790490 chr4:103790449-103790469
20	ATF3	chr4:103790308-103790490	GM12878	blood:	n/a	chr4:103790479-103790488 chr4:103790481-103790490 chr4:103790449-103790469
21	BACH1	chr4:103792866-103793229	K562	blood:	n/a	n/a
22	BACH1	chr4:103789839-103790039	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr4:103792938-103793120	H1-hESC	embryonic stem cell:	n/a	n/a
24	BATF	chr4:103909847-103910050	GM12878	blood:	n/a	n/a
25	BATF	chr4:103823033-103823354	GM12878	blood:	n/a	n/a
26	BCLAF1	chr4:103789522-103790938	GM12878	blood:	n/a	chr4:103789561-103789570 chr4:103790925-103790938 chr4:103790183-103790196
27	BCLAF1	chr4:103789643-103790896	GM12878	blood:	n/a	chr4:103790183-103790196
28	BCLAF1	chr4:103788658-103789175	GM12878	blood:	n/a	n/a
29	BHLHE40	chr4:103790296-103790569	HepG2	liver:	n/a	chr4:103790449-103790458 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790448-103790457
30	BHLHE40	chr4:103789520-103791008	GM12878	blood:	n/a	chr4:103790449-103790458 chr4:103790923-103790939 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790167-103790183 chr4:103790448-103790457
31	BHLHE40	chr4:103792088-103792224	K562	blood:	n/a	n/a
32	BHLHE40	chr4:103789639-103791119	HepG2	liver:	n/a	chr4:103790449-103790458 chr4:103790923-103790939 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790167-103790183 chr4:103790448-103790457
33	BHLHE40	chr4:103793001-103793168	K562	blood:	n/a	n/a
34	BHLHE40	chr4:103790160-103790653	HepG2	liver:	n/a	chr4:103790449-103790458 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790167-103790183 chr4:103790448-103790457
35	BHLHE40	chr4:103789732-103790982	K562	blood:	n/a	chr4:103790449-103790458 chr4:103790923-103790939 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790167-103790183 chr4:103790448-103790457
36	BHLHE40	chr4:103790262-103790847	A549	lung:	n/a	chr4:103790449-103790458 chr4:103790447-103790460 chr4:103790449-103790458 chr4:103790448-103790457
37	BHLHE40	chr4:103788684-103788738	GM12878	blood:	n/a	n/a
38	BRCA1	chr4:103789863-103790674	HepG2	liver:	n/a	n/a
39	BRCA1	chr4:103789872-103790671	GM12878	blood:	n/a	n/a
40	BRCA1	chr4:103789829-103790690	H1-hESC	embryonic stem cell:	n/a	n/a
41	BRCA1	chr4:103789840-103791199	Hela-S3	cervix:	n/a	n/a
42	CBX3	chr4:103790118-103790484	K562	blood:	n/a	n/a
43	CBX3	chr4:103914761-103915033	K562	blood:	n/a	n/a
44	CBX3	chr4:103798566-103799207	K562	blood:	n/a	n/a
45	CBX3	chr4:103798436-103799283	K562	blood:	n/a	n/a
46	CBX3	chr4:103789652-103790994	K562	blood:	n/a	n/a
47	CBX3	chr4:103790521-103790933	K562	blood:	n/a	n/a
48	CBX3	chr4:103789717-103790091	K562	blood:	n/a	n/a
49	CBX3	chr4:103836093-103836257	K562	blood:	n/a	n/a
50	CCNT2	chr4:103789844-103791367	K562	blood:	n/a	n/a

(count:610 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:103867628-103867678	Hepatocyte	liver:	n/a
2	chr4:103790325-103790375	T-47D	breast:	n/a
3	chr4:103790325-103790375	SKMC	muscle:	n/a
4	chr4:103790299-103790349	PANC-1	pancreas:	n/a
5	chr4:103787113-103787163	GM12892	blood:	n/a
6	chr4:103790299-103790349	SK-N-SH	brain:	n/a
7	chr4:103790571-103790621	GM12892	blood:	n/a
8	chr4:103789516-103789566	HUVEC	blood vessel:	n/a
9	chr4:103790325-103790375	HEK293	kidney:	embryo
10	chr4:103867628-103867678	BE2_C	brain:	n/a
11	chr4:103790509-103790559	H1-hESC	embryonic stem cell:	embryo
12	chr4:103790509-103790559	SK-N-SH	brain:	n/a
13	chr4:103787113-103787163	SKMC	muscle:	n/a
14	chr4:103790571-103790621	HIPEpiC	eye:	n/a
15	chr4:103790509-103790559	HUVEC	blood vessel:	n/a
16	chr4:103790571-103790621	BE2_C	brain:	n/a
17	chr4:103790056-103790106	MCF10A-Er-Src	breast:	n/a
18	chr4:103790056-103790106	AG09309	skin:	n/a
19	chr4:103790325-103790375	U87	brain:	n/a
20	chr4:103790325-103790375	MCF-7	breast:	n/a
21	chr4:103867628-103867678	PrEC	prostate:	n/a
22	chr4:103790299-103790349	SKMC	muscle:	n/a
23	chr4:103790299-103790349	SK-N-SH_RA	brain:	n/a
24	chr4:103790509-103790559	AG10803	skin:	n/a
25	chr4:103790509-103790559	PrEC	prostate:	n/a
26	chr4:103787113-103787163	MCF-7	breast:	n/a
27	chr4:103789516-103789566	NT2-D1	testis:	n/a
28	chr4:103789592-103789642	HMEC	breast:	n/a
29	chr4:103790299-103790349	RPTEC	kidney:	n/a
30	chr4:103790325-103790375	HUVEC	blood vessel:	n/a
31	chr4:103790509-103790559	GM06990	blood:	n/a
32	chr4:103789962-103790012	HL-60	blood:	n/a
33	chr4:103790299-103790349	ovcar-3	ovarian:	n/a
34	chr4:103790299-103790349	SK-N-MC	brain:	n/a
35	chr4:103789516-103789566	SAEC	small airway:	n/a
36	chr4:103790509-103790559	GM12892	blood:	n/a
37	chr4:103789962-103790012	PFSK-1	brain:	n/a
38	chr4:103867628-103867678	HEEpiC	esophagus:	n/a
39	chr4:103867628-103867678	HepG2	liver:	n/a
40	chr4:103789962-103790012	AG09309	skin:	n/a
41	chr4:103790571-103790621	NHBE	bronchial:	n/a
42	chr4:103790571-103790621	HRPEpiC	eye:	n/a
43	chr4:103790571-103790621	HNPCEpiC	eye:	n/a
44	chr4:103790056-103790106	NHBE	bronchial:	n/a
45	chr4:103867628-103867678	ECC-1	luminal epithelium:	n/a
46	chr4:103790325-103790375	CMK	blood:	n/a
47	chr4:103790571-103790621	AoSMC	blood vessel:	n/a
48	chr4:103787113-103787163	AG04450	lung:	fetal
49	chr4:103789592-103789642	GM12892	blood:	n/a
50	chr4:103787113-103787163	NH-A	brain:	n/a

(count:64 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr4:103748362..103749033-chr4:103789975..103790655,2	MCF-7	breast:
2	chr4:103420801..103422713-chr4:103788549..103790211,2	MCF-7	breast:
3	chr4:103736995..103756245-chr4:103778393..103800311,117	K562	blood:
4	chr14:50087078..50087748-chr4:103790097..103790729,2	HCT-116	colon:
5	chr4:103745482..103752084-chr4:103788371..103792114,20	MCF-7	breast:
6	chr4:103781973..103785521-chr4:103788128..103792048,4	MCF-7	breast:
7	chr4:103789875..103791593-chr4:103798432..103800805,2	MCF-7	breast:
8	chr4:103421575..103424271-chr4:103788743..103790943,2	K562	blood:
9	chr4:103770498..103773178-chr4:103786218..103788263,2	K562	blood:
10	chr4:103746466..103749555-chr4:103796408..103800976,4	K562	blood:
11	chr21:40751768..40752544-chr4:103789675..103790558,3	Hela-S3	cervix:
12	chr12:65002574..65003271-chr4:103789942..103790730,2	Hela-S3	cervix:
13	chr4:103713400..103715221-chr4:103814511..103816662,2	K562	blood:
14	chr4:103782723..103785636-chr4:103787155..103789919,2	MCF-7	breast:
15	chr4:103782723..103785636-chr4:103787155..103789919,2	MCF-7	breast:
16	chr4:103420299..103423075-chr4:103789443..103791523,3	K562	blood:
17	chr4:103802810..103805581-chr4:103812817..103815542,2	K562	blood:
18	chr4:103790073..103790585-chr6:26056049..26056795,2	NB4	blood:
19	chr2:20101039..20101818-chr4:103790051..103790670,2	Hela-S3	cervix:
20	chr4:103775426..103778667-chr4:103788378..103789993,3	MCF-7	breast:
21	chr4:100870088..100872119-chr4:103789876..103793001,3	K562	blood:
22	chr4:100869430..100871433-chr4:103792191..103794133,2	K562	blood:
23	chr4:103776066..103778071-chr4:103784776..103786781,2	K562	blood:
24	chr2:86849205..86851980-chr4:103788532..103791480,2	MCF-7	breast:
25	chr4:103789205..103791017-chr4:103995982..103997960,2	K562	blood:
26	chr4:103791034..103792845-chr4:103804270..103806826,2	K562	blood:
27	chr4:103744455..103746135-chr4:103804682..103806272,2	K562	blood:
28	chr4:103795111..103797897-chr4:103800185..103803002,2	K562	blood:
29	chr4:103876539..103878072-chr4:103939783..103942187,2	K562	blood:
30	chr4:103788356..103790737-chr4:103795303..103797509,2	MCF-7	breast:
31	chr4:103746438..103750337-chr4:103782400..103786138,6	MCF-7	breast:
32	chr4:103749258..103750005-chr4:103790000..103790583,2	Hela-S3	cervix:
33	chr4:103792090..103794720-chr4:103796684..103798750,2	K562	blood:
34	chr4:103789854..103790660-chr7:139026073..139026575,2	NB4	blood:
35	chr10:65280457..65281194-chr4:103789505..103790213,2	HCT-116	colon:
36	chr4:103782734..103784847-chr4:103785870..103787705,2	MCF-7	breast:
37	chr4:103757981..103760210-chr4:103788779..103792058,4	MCF-7	breast:
38	chr4:103741330..103752134-chr4:103778393..103796398,92	K562	blood:
39	chr4:103788686..103792027-chr4:103796765..103800164,3	K562	blood:
40	chr4:103792090..103794720-chr4:103796684..103798750,2	K562	blood:
41	chr4:103747946..103751403-chr4:103826007..103829702,3	K562	blood:
42	chr4:103801030..103803497-chr4:103805639..103808341,2	K562	blood:
43	chr4:103747316..103751264-chr4:103783852..103786816,4	MCF-7	breast:
44	chr4:103775754..103778384-chr4:103782833..103785617,2	MCF-7	breast:
45	chr12:56511434..56512133-chr4:103789790..103790304,2	Hela-S3	cervix:
46	chr4:103802810..103805581-chr4:103812817..103815542,2	K562	blood:
47	chr11:65266418..65266967-chr4:103790425..103791246,2	Hela-S3	cervix:
48	chr4:103747662..103750581-chr4:103808763..103811614,2	K562	blood:
49	chr4:103742789..103744562-chr4:103800486..103802879,2	MCF-7	breast:
50	chr4:103790029..103792721-chr4:103804563..103806483,2	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC9B2-1	chr4:103832588-103832694	NR_047515
2	lnc-SLC9B2-1	chr4:103827693-103827801	NR_047515
3	lnc-SLC9B2-1	chr4:103833165-103833286	NONHSAT097615
4	lnc-SLC9B2-1	chr4:103811738-103811830	NR_047515
5	lnc-SLC9B2-1	chr4:103806205-103806446	NR_047515
6	lnc-SLC9B2-1	chr4:103831596-103831745	NR_047515
7	lnc-SLC9B2-1	chr4:103833165-103833286	NR_047515
8	lnc-SLC9B2-1	chr4:103826671-103826807	NR_047515
9	lnc-SLC9B2-1	chr4:103806209-103806446	NONHSAT097616
10	lnc-SLC9B2-1	chr4:103912800-103912869	NR_047515
11	lnc-SLC9B2-1	chr4:103806209-103806446	NONHSAT097615
12	lnc-SLC9B2-1	chr4:103910957-103911098	NR_047515
13	lnc-CISD2-6	chr4:103817882-103819394	NONHSAT097617
14	lnc-SLC9B2-1	chr4:103853281-103853456	NR_047515

No data

Variant related genes	Relation type
CISD2	TF binding region
UBE2D3	TF binding region
SLC9B1	TF binding region
ACTR3BP4	TF binding region
PABPC1P7	TF binding region
ENSG00000238948	TF binding region
CISD2	CpG island
UBE2D3	CpG island
SLC9B1	CpG island
ACTR3BP4	CpG island
PABPC1P7	CpG island
ENSG00000238948	CpG island
ENSG00000135482	chromatin interactions
ENSG00000168282	chromatin interactions
ENSG00000246560	chromatin interactions
ENSG00000109320	chromatin interactions
ENSG00000271991	chromatin interactions
ENSG00000260651	chromatin interactions
ENSG00000139641	chromatin interactions
ENSG00000187837	chromatin interactions
ENSG00000145354	chromatin interactions
ENSG00000252739	chromatin interactions
ENSG00000245322	chromatin interactions
ENSG00000183891	chromatin interactions
ENSG00000249884	chromatin interactions
ENSG00000164032	chromatin interactions
ENSG00000109332	chromatin interactions
ENSG00000165502	chromatin interactions
ENSG00000182093	chromatin interactions
ENSG00000256670	chromatin interactions
ENSG00000239305	chromatin interactions
ENSG00000269955	chromatin interactions
ENSG00000165476	chromatin interactions
ENSG00000251562	chromatin interactions
ENSG00000164038	chromatin interactions
ENSG00000164037	chromatin interactions

Extended variants
information (count: 4053 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:4053 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs223340	chr4:103785051-103785052	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs543628113	chr4:103785122-103785123	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs561584385	chr4:103785134-103785135	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs553856558	chr4:103785179-103785180	Weak transcription Enhancers Strong transcription	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs369239660	chr4:103785214-103785215	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs573434758	chr4:103785249-103785250	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs13147651	chr4:103785286-103785287	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs13120289	chr4:103785296-103785297	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs540611970	chr4:103785308-103785309	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
10	rs13147672	chr4:103785327-103785328	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
11	rs138618807	chr4:103785335-103785336	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
12	rs13120494	chr4:103785372-103785373	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs527956352	chr4:103785388-103785389	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs13121197	chr4:103785438-103785439	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs552627171	chr4:103785448-103785449	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs563156068	chr4:103785508-103785509	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs141630273	chr4:103785524-103785525	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs545692965	chr4:103785547-103785548	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs77202592	chr4:103785582-103785583	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	mRNA abundance
20	rs59356815	chr4:103785716-103785717	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs111386652	chr4:103785739-103785740	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs529457184	chr4:103785749-103785750	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs184656324	chr4:103785764-103785765	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs188580861	chr4:103785791-103785792	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs28731337	chr4:103785845-103785846	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs223339	chr4:103785857-103785858	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs569938324	chr4:103785893-103785894	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs559619052	chr4:103785971-103785972	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs536802464	chr4:103785975-103785976	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs144826051	chr4:103785988-103785989	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs530233091	chr4:103785997-103785998	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs148580424	chr4:103786049-103786050	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs540752567	chr4:103786054-103786055	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs223338	chr4:103786116-103786117	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs577181785	chr4:103786119-103786120	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs62327284	chr4:103786146-103786147	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs76243077	chr4:103786176-103786177	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs141965194	chr4:103786198-103786199	Weak transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs532072643	chr4:103786304-103786305	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs115879373	chr4:103786307-103786308	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs562298111	chr4:103786323-103786324	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs529391533	chr4:103786368-103786369	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs223337	chr4:103786371-103786372	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	mRNA abundance
44	rs566201816	chr4:103786402-103786403	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs181156440	chr4:103786435-103786436	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs534353428	chr4:103786478-103786479	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs78802216	chr4:103786487-103786488	Weak transcription Enhancers Genic enhancers Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs112818498	chr4:103786506-103786507	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs111876040	chr4:103786512-103786513	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs567682417	chr4:103786522-103786523	Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Hepatocellular carcinoma	16750200	CNVD
Myxofibrosarcoma	16751306	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Breast cancer	16272173	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
small cell lung cancer	20016488	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20459617	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	16573809	CNVD
Multiple myeloma	16616336	CNVD
Melanoma	20688739	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	18000384	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
myeloid cancer	21057493	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1085 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103750800-103788000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr4:103765400-103788800	Weak transcription	Left Ventricle	heart
3	chr4:103779000-103787600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr4:103780000-103788000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr4:103780200-103789200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr4:103780400-103788800	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr4:103780800-103788000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
8	chr4:103781000-103788800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:103781000-103789400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr4:103781200-103785800	Weak transcription	Primary T helper cells fromperipheralblood	blood
11	chr4:103781200-103788600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr4:103781800-103788000	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr4:103781800-103789600	Weak transcription	Fetal Brain Male	brain
14	chr4:103782000-103788000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr4:103782200-103788600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr4:103782200-103788600	Weak transcription	Fetal Thymus	thymus
17	chr4:103782200-103788800	Weak transcription	Brain Inferior Temporal Lobe	brain
18	chr4:103782200-103788800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr4:103782400-103788800	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr4:103782400-103788800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr4:103782400-103788800	Weak transcription	Fetal Muscle Leg	muscle
22	chr4:103782400-103789200	Weak transcription	Cortex derived primary cultured neurospheres	brain
23	chr4:103782400-103789400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr4:103782600-103788400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
25	chr4:103782600-103789000	Weak transcription	Fetal Stomach	stomach
26	chr4:103782800-103785200	Strong transcription	Dnd41	blood
27	chr4:103783200-103786600	Weak transcription	Primary hematopoietic stem cells	blood
28	chr4:103783400-103788800	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr4:103784000-103785800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
30	chr4:103784000-103788600	Weak transcription	Primary neutrophils fromperipheralblood	blood
31	chr4:103784000-103788800	Weak transcription	Primary B cells from cord blood	blood
32	chr4:103784200-103785200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr4:103784200-103788600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr4:103784400-103785200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr4:103784400-103786800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
36	chr4:103784400-103788800	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr4:103784600-103788800	Weak transcription	Monocytes-CD14+_RO01746	blood
38	chr4:103784800-103788600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr4:103785000-103786600	Enhancers	Primary T cells from cord blood	blood
40	chr4:103785200-103785600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chr4:103785200-103786200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
42	chr4:103785200-103787000	Genic enhancers	Dnd41	blood
43	chr4:103785200-103787200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr4:103785200-103789000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
45	chr4:103785600-103785800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
46	chr4:103785600-103786000	Enhancers	Primary T helper naive cells from peripheral blood	blood
47	chr4:103785600-103788600	Enhancers	Primary T helper cells PMA-I stimulated	--
48	chr4:103785600-103788800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
49	chr4:103785800-103786000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr4:103785800-103786000	Enhancers	HepG2	liver

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