Variant report

Variant	nsv880171
Chromosome Location	chr4:142177058-142334172
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1576)
CpG islands
(count:305)
Chromatin interactive
region (count:74)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1576 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr4:142274174-142274575	K562	blood:	n/a	n/a
2	ATF1	chr4:142273518-142273854	K562	blood:	n/a	n/a
3	ATF2	chr4:142228294-142228890	GM12878	blood:	n/a	n/a
4	ATF2	chr4:142228239-142228935	GM12878	blood:	n/a	n/a
5	ATF2	chr4:142230849-142231471	GM12878	blood:	n/a	n/a
6	ATF2	chr4:142230960-142231486	GM12878	blood:	n/a	n/a
7	ATF2	chr4:142225467-142225814	GM12878	blood:	n/a	n/a
8	ATF3	chr4:142271128-142271654	A549	lung:	n/a	n/a
9	ATF3	chr4:142271271-142271726	A549	lung:	n/a	n/a
10	BACH1	chr4:142252714-142253010	K562	blood:	n/a	n/a
11	BATF	chr4:142225485-142225871	GM12878	blood:	n/a	chr4:142225692-142225703 chr4:142225697-142225707
12	BATF	chr4:142228324-142228802	GM12878	blood:	n/a	n/a
13	BATF	chr4:142293763-142293961	GM12878	blood:	n/a	n/a
14	BATF	chr4:142225483-142225806	GM12878	blood:	n/a	chr4:142225692-142225703 chr4:142225697-142225707
15	BATF	chr4:142231062-142231358	GM12878	blood:	n/a	n/a
16	BATF	chr4:142293784-142293949	GM12878	blood:	n/a	n/a
17	BCL11A	chr4:142231053-142231338	GM12878	blood:	n/a	n/a
18	BCL11A	chr4:142228313-142228892	GM12878	blood:	n/a	n/a
19	BCL11A	chr4:142228338-142228797	GM12878	blood:	n/a	n/a
20	BCL11A	chr4:142230948-142231394	GM12878	blood:	n/a	n/a
21	BCL3	chr4:142322055-142322342	GM12878	blood:	n/a	n/a
22	BCL3	chr4:142253576-142253793	K562	blood:	n/a	n/a
23	BCL3	chr4:142271067-142271791	A549	lung:	n/a	n/a
24	BCL3	chr4:142228406-142228737	GM12878	blood:	n/a	n/a
25	BCL3	chr4:142230982-142231359	GM12878	blood:	n/a	n/a
26	BCL3	chr4:142248605-142248833	K562	blood:	n/a	n/a
27	BCLAF1	chr4:142228266-142228896	GM12878	blood:	n/a	n/a
28	BCLAF1	chr4:142250972-142252509	K562	blood:	n/a	chr4:142251197-142251206 chr4:142251123-142251132
29	BCLAF1	chr4:142252412-142253869	K562	blood:	n/a	n/a
30	BCLAF1	chr4:142249567-142250217	K562	blood:	n/a	n/a
31	BCLAF1	chr4:142248960-142249389	K562	blood:	n/a	n/a
32	BCLAF1	chr4:142251543-142252345	K562	blood:	n/a	n/a
33	BCLAF1	chr4:142228290-142228841	GM12878	blood:	n/a	n/a
34	BCLAF1	chr4:142252533-142253870	K562	blood:	n/a	n/a
35	BHLHE40	chr4:142228285-142228886	GM12878	blood:	n/a	n/a
36	BHLHE40	chr4:142253588-142253915	K562	blood:	n/a	n/a
37	BHLHE40	chr4:142230894-142231432	GM12878	blood:	n/a	n/a
38	BRCA1	chr4:142250050-142251120	Hela-S3	cervix:	n/a	n/a
39	BRCA1	chr4:142228402-142228771	GM12878	blood:	n/a	n/a
40	BRCA1	chr4:142226071-142226148	GM12878	blood:	n/a	n/a
41	CBX3	chr4:142253444-142253893	K562	blood:	n/a	n/a
42	CBX3	chr4:142253553-142253912	K562	blood:	n/a	n/a
43	CBX3	chr4:142212009-142212237	K562	blood:	n/a	n/a
44	CBX3	chr4:142252652-142253436	K562	blood:	n/a	n/a
45	CBX3	chr4:142211976-142212228	K562	blood:	n/a	n/a
46	CCNT2	chr4:142251912-142252287	K562	blood:	n/a	n/a
47	CCNT2	chr4:142253576-142253776	K562	blood:	n/a	n/a
48	CCNT2	chr4:142241057-142241254	K562	blood:	n/a	n/a
49	CCNT2	chr4:142246165-142246351	K562	blood:	n/a	n/a
50	CCNT2	chr4:142273541-142273885	K562	blood:	n/a	chr4:142273704-142273724

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:142297721-142297771	SKMC	muscle:	n/a
2	chr4:142228617-142228667	HL-60	blood:	n/a
3	chr4:142297721-142297771	AG09309	skin:	n/a
4	chr4:142253700-142253750	MCF10A-Er-Src	breast:	n/a
5	chr4:142228617-142228667	AG04450	lung:	fetal
6	chr4:142197646-142197696	HRE	kidney:	n/a
7	chr4:142297721-142297771	CMK	blood:	n/a
8	chr4:142253700-142253750	SK-N-MC	brain:	n/a
9	chr4:142228617-142228667	PANC-1	pancreas:	n/a
10	chr4:142197646-142197696	HRPEpiC	eye:	n/a
11	chr4:142249864-142249914	GM12878	blood:	n/a
12	chr4:142297721-142297771	A549	lung:	n/a
13	chr4:142197646-142197696	T-47D	breast:	n/a
14	chr4:142249864-142249914	BJ	skin:	n/a
15	chr4:142297721-142297771	NT2-D1	testis:	n/a
16	chr4:142249864-142249914	PFSK-1	brain:	n/a
17	chr4:142253700-142253750	HRE	kidney:	n/a
18	chr4:142228617-142228667	HRPEpiC	eye:	n/a
19	chr4:142297721-142297771	GM12892	blood:	n/a
20	chr4:142249864-142249914	HCF	heart:	n/a
21	chr4:142228617-142228667	GM12892	blood:	n/a
22	chr4:142253700-142253750	HCM	heart:	n/a
23	chr4:142297721-142297771	GM12878	blood:	n/a
24	chr4:142197646-142197696	HepG2	liver:	n/a
25	chr4:142249864-142249914	NT2-D1	testis:	n/a
26	chr4:142228617-142228667	Hela-S3	cervix:	n/a
27	chr4:142253700-142253750	HEK293	kidney:	embryo
28	chr4:142253700-142253750	HIPEpiC	eye:	n/a
29	chr4:142228617-142228667	NT2-D1	testis:	n/a
30	chr4:142228617-142228667	BJ	skin:	n/a
31	chr4:142253700-142253750	Hepatocyte	liver:	n/a
32	chr4:142228617-142228667	T-47D	breast:	n/a
33	chr4:142249864-142249914	H1-hESC	embryonic stem cell:	embryo
34	chr4:142228617-142228667	SKMC	muscle:	n/a
35	chr4:142297721-142297771	GM06990	blood:	n/a
36	chr4:142197646-142197696	HRCEpiC	kidney:	n/a
37	chr4:142249864-142249914	HUVEC	blood vessel:	n/a
38	chr4:142297721-142297771	HL-60	blood:	n/a
39	chr4:142253700-142253750	U87	brain:	n/a
40	chr4:142197646-142197696	LNCaP	prostate:	n/a
41	chr4:142249864-142249914	HepG2	liver:	n/a
42	chr4:142297721-142297771	NHBE	bronchial:	n/a
43	chr4:142297721-142297771	HEEpiC	esophagus:	n/a
44	chr4:142249864-142249914	Hepatocyte	liver:	n/a
45	chr4:142249864-142249914	HAEpiC	amniotic membrane:	n/a
46	chr4:142249864-142249914	AG09319	gingival:	n/a
47	chr4:142228617-142228667	MCF10A-Er-Src	breast:	n/a
48	chr4:142253700-142253750	HL-60	blood:	n/a
49	chr4:142253700-142253750	SKMC	muscle:	n/a
50	chr4:142228617-142228667	HEK293	kidney:	embryo

(count:74 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr4:142229401..142231764-chr4:142233130..142234900,2	K562	blood:
2	chr4:142223496..142225968-chr4:142226555..142229787,3	K562	blood:
3	chr4:142223496..142225968-chr4:142226555..142229787,3	K562	blood:
4	chr4:142218321..142220466-chr4:142222035..142224612,2	K562	blood:
5	chr4:142229401..142231764-chr4:142233130..142234900,2	K562	blood:
6	chr4:142238573..142240145-chr4:142249869..142252325,2	MCF-7	breast:
7	chr4:142295670..142297489-chr4:142636919..142639486,2	MCF-7	breast:
8	chr4:142198221..142199748-chr4:142201608..142203803,2	K562	blood:
9	chr4:142226878..142229374-chr4:142249286..142252020,3	K562	blood:
10	chr4:142314911..142316504-chr4:142316871..142319041,2	MCF-7	breast:
11	chr4:142234880..142236477-chr4:142238216..142240524,2	K562	blood:
12	chr4:142071268..142073087-chr4:142251176..142252927,2	K562	blood:
13	chr4:142142150..142144125-chr4:142248641..142251434,2	K562	blood:
14	chr4:142236486..142239210-chr4:142239920..142242605,2	K562	blood:
15	chr4:142145239..142147400-chr4:142251426..142253615,3	K562	blood:
16	chr4:142143487..142146367-chr4:142238694..142241101,2	K562	blood:
17	chr4:142238573..142240145-chr4:142249869..142252325,2	MCF-7	breast:
18	chr4:142233427..142235832-chr4:142247166..142249563,2	K562	blood:
19	chr4:142236486..142239210-chr4:142239920..142242605,2	K562	blood:
20	chr4:142267058..142267811-chr4:142632121..142633106,3	MCF-7	breast:
21	chr4:142070738..142073087-chr4:142250594..142253709,3	K562	blood:
22	chr4:142251499..142254642-chr4:142267265..142269320,4	K562	blood:
23	chr4:142238509..142241049-chr4:142259317..142261670,2	K562	blood:
24	chr4:142209902..142211732-chr4:142250970..142253127,2	K562	blood:
25	chr4:142251199..142257222-chr4:142271888..142277075,8	K562	blood:
26	chr4:142296713..142297323-chr4:142632141..142632805,2	MCF-7	breast:
27	chr4:142233427..142235832-chr4:142247166..142249563,2	K562	blood:
28	chr4:142268352..142269986-chr4:142269997..142272085,2	MCF-7	breast:
29	chr4:141870898..141873805-chr4:142207109..142209928,2	K562	blood:
30	chr4:142226878..142228627-chr4:142250493..142252020,2	K562	blood:
31	chr4:142220674..142222220-chr4:142239442..142241606,2	K562	blood:
32	chr4:142217513..142222761-chr4:142230505..142235179,4	K562	blood:
33	chr4:142261368..142264088-chr4:142272060..142274343,2	K562	blood:
34	chr4:142249413..142251647-chr4:144107671..144110425,2	K562	blood:
35	chr4:142267430..142267999-chr4:142622577..142623359,2	MCF-7	breast:
36	chr4:142248968..142250827-chr4:144195505..144197291,2	K562	blood:
37	chr4:142262177..142264027-chr4:142266766..142270485,4	K562	blood:
38	chr4:142258318..142261714-chr4:142265354..142269048,5	K562	blood:
39	chr4:142314911..142316504-chr4:142316871..142319041,2	MCF-7	breast:
40	chr4:142213375..142215104-chr4:142217657..142219190,2	K562	blood:
41	chr4:142264427..142267290-chr4:142271657..142274374,2	K562	blood:
42	chr4:142150167..142154437-chr4:142247980..142250502,4	K562	blood:
43	chr4:142264427..142267290-chr4:142271657..142274374,2	K562	blood:
44	chr4:142141223..142142982-chr4:142250802..142253711,2	K562	blood:
45	chr4:142258318..142261714-chr4:142265354..142269048,5	K562	blood:
46	chr4:142227407..142229215-chr4:142236190..142237772,2	K562	blood:
47	chr4:142230647..142232149-chr4:142235129..142237380,2	K562	blood:
48	chr4:142234880..142236477-chr4:142238216..142240524,2	K562	blood:
49	chr4:142140429..142142845-chr4:142246599..142248409,2	K562	blood:
50	chr4:142070131..142073130-chr4:142247231..142250197,2	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF330-4	chr4:142326326-142328740	NONHSAT098527
2	lnc-ZNF330-3	chr4:142264880-142265230	NONHSAT098526
3	lnc-RNF150-2	chr4:142242283-142242535	ENSG00000248810
4	lnc-ZNF330-3	chr4:142264028-142264398	NONHSAT098526
5	lnc-RNF150-2	chr4:142244576-142247161	ENSG00000248810
6	lnc-RNF150-1	chr4:142199598-142199943	XLOC_004102
7	lnc-RNF150-2	chr4:142244576-142244716	ENSG00000248810
8	lnc-RNF150-1	chr4:142195495-142195594	XLOC_004102
9	lnc-RNF150-2	chr4:142240604-142241054	ENSG00000248810

No data

Variant related genes	Relation type
ENSG00000250189	TF binding region
ENSG00000248810	TF binding region
ENSG00000238695	TF binding region
ENSG00000248747	TF binding region
ENSG00000250189	CpG island
ENSG00000248810	CpG island
ENSG00000238695	CpG island
ENSG00000248747	CpG island
ENSG00000248810	chromatin interactions
ENSG00000109445	chromatin interactions
ENSG00000238695	chromatin interactions
ENSG00000250189	chromatin interactions
CCNE2	miRNA target sites
MYB	miRNA target sites

Extended variants
information (count: 4238 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:4238 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs183706859	chr4:142181019-142181020	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs549056597	chr4:142181098-142181099	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs539490310	chr4:142181161-142181162	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs143027886	chr4:142181163-142181164	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs189148812	chr4:142181226-142181227	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs192813854	chr4:142181236-142181237	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs571812060	chr4:142181253-142181254	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs151161534	chr4:142181297-142181298	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs185330036	chr4:142181458-142181459	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs140211537	chr4:142181461-142181462	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs113577780	chr4:142181485-142181486	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs1579585	chr4:142181491-142181492	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs207465137	chr4:142181507-142181508	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs138976995	chr4:142181514-142181515	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs142242692	chr4:142181533-142181534	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs1583440	chr4:142181548-142181549	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs189241513	chr4:142181563-142181564	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs545004585	chr4:142181571-142181572	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs560154590	chr4:142181581-142181582	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs527674975	chr4:142181597-142181598	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs79849106	chr4:142181598-142181599	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs191780644	chr4:142181633-142181634	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs531947635	chr4:142181692-142181693	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs145917539	chr4:142181711-142181712	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs571909167	chr4:142181766-142181767	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs573096480	chr4:142194001-142194002	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
27	rs377662505	chr4:142194004-142194005	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
28	rs35192624	chr4:142194050-142194051	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
29	rs183445345	chr4:142194061-142194062	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
30	rs148325859	chr4:142194067-142194068	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
31	rs554590374	chr4:142194090-142194091	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
32	rs113110692	chr4:142194135-142194136	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
33	rs111235321	chr4:142194166-142194167	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
34	rs186344199	chr4:142194227-142194228	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
35	rs58315999	chr4:142194239-142194240	Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs577614037	chr4:142194253-142194254	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
37	rs532481710	chr4:142194296-142194297	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
38	rs554225523	chr4:142194313-142194314	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
39	rs559018531	chr4:142194368-142194369	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
40	rs190075279	chr4:142194405-142194406	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
41	rs543158488	chr4:142194419-142194420	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
42	rs561574912	chr4:142194487-142194488	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
43	rs375983012	chr4:142194511-142194512	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
44	rs2572243	chr4:142194514-142194515	Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs544589019	chr4:142194522-142194523	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
46	rs544124794	chr4:142194550-142194551	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
47	rs564901572	chr4:142194565-142194566	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
48	rs182707335	chr4:142194580-142194581	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
49	rs72936710	chr4:142194613-142194614	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
50	rs565740553	chr4:142194778-142194779	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	16272173	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Esophageal cancer	21851588	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Mental retardation	17901693	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	18632612	CNVD
Ewing''s sarcoma	17952124	CNVD
Obesity	20622171	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Breast cancer	22048815	CNVD
Autism	22241247	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21510904	CNVD
Intellectual disability	21811512	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:761 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:142181000-142181400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr4:142181200-142181800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr4:142194000-142194800	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr4:142195600-142196200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr4:142195800-142196200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr4:142196200-142196600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr4:142196200-142196600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr4:142196200-142198200	Enhancers	NH-A	brain
9	chr4:142196400-142197000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr4:142196400-142197000	Enhancers	HSMMtube	muscle
11	chr4:142196400-142197200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr4:142196400-142197400	Enhancers	NHDF-Ad	bronchial
13	chr4:142196400-142197600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr4:142196400-142197800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr4:142196400-142198000	Enhancers	HSMM	muscle
16	chr4:142196400-142198000	Enhancers	Osteobl	bone
17	chr4:142196600-142197000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr4:142196600-142197200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr4:142196600-142197400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr4:142196600-142197600	Enhancers	Primary hematopoietic stem cells	blood
21	chr4:142196600-142197600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr4:142196600-142197800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr4:142196800-142197200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr4:142196800-142197200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr4:142196800-142197400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr4:142196800-142197600	Enhancers	NHLF	lung
27	chr4:142197200-142200400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr4:142198800-142199000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr4:142200400-142202000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
30	chr4:142204200-142205000	Enhancers	GM12878-XiMat	blood
31	chr4:142214200-142214800	Active TSS	K562	blood
32	chr4:142214800-142215800	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr4:142214800-142217000	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr4:142215800-142216200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
35	chr4:142216200-142217200	Enhancers	Monocytes-CD14+_RO01746	blood
36	chr4:142221600-142221800	Enhancers	Left Ventricle	heart
37	chr4:142221800-142222000	Enhancers	Fetal Heart	heart
38	chr4:142221800-142228600	Weak transcription	Left Ventricle	heart
39	chr4:142222000-142222400	Flanking Active TSS	Fetal Heart	heart
40	chr4:142222200-142222600	Enhancers	Skeletal Muscle Female	skeletal muscle
41	chr4:142222400-142223200	Enhancers	Fetal Heart	heart
42	chr4:142222600-142222800	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr4:142222800-142223200	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr4:142222800-142223400	Enhancers	Fetal Lung	lung
45	chr4:142223200-142228600	Weak transcription	Skeletal Muscle Female	skeletal muscle
46	chr4:142224600-142225200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr4:142225200-142228400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr4:142225400-142227200	Enhancers	GM12878-XiMat	blood
49	chr4:142227200-142227600	Weak transcription	GM12878-XiMat	blood
50	chr4:142227400-142229000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links