Variant report

Variant nsv880272
Chromosome Location chr5:53213945-53277266
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:532 , 50 per page) page: 1 2 3 4 5 6 7 ... 11
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53173800-53227800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr5:53187600-53232800 Weak transcription Primary T cells from cord blood blood
3 chr5:53189800-53216600 Weak transcription Left Ventricle heart
4 chr5:53200800-53251600 Weak transcription Primary B cells from cord blood blood
5 chr5:53206800-53236600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:53208200-53215000 Weak transcription Fetal Brain Female brain
7 chr5:53212800-53214000 Enhancers K562 blood
8 chr5:53213000-53214000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr5:53213400-53214200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr5:53213400-53215400 Enhancers Fetal Brain Male brain
11 chr5:53213400-53219000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
12 chr5:53213600-53219800 Weak transcription Rectal Smooth Muscle rectum
13 chr5:53213600-53220200 Weak transcription HSMM muscle
14 chr5:53213800-53214800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr5:53213800-53215000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:53213800-53218800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:53213800-53219800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr5:53213800-53219800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr5:53213800-53220200 Weak transcription Fetal Stomach stomach
20 chr5:53213800-53225600 Weak transcription Fetal Intestine Large intestine
21 chr5:53213800-53235200 Weak transcription Fetal Intestine Small intestine
22 chr5:53214000-53238600 Weak transcription K562 blood
23 chr5:53215000-53215200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:53215000-53215400 Enhancers Pancreatic Islets Pancreatic Islet
25 chr5:53215000-53215600 Enhancers Fetal Brain Female brain
26 chr5:53215400-53215600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
27 chr5:53215400-53215600 Enhancers Fetal Muscle Leg muscle
28 chr5:53215600-53220400 Weak transcription Fetal Muscle Leg muscle
29 chr5:53215600-53223400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr5:53216600-53216800 Enhancers Left Ventricle heart
31 chr5:53216800-53221200 Weak transcription Left Ventricle heart
32 chr5:53217000-53230400 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr5:53217200-53220400 Weak transcription Small Intestine intestine
34 chr5:53217200-53244800 Weak transcription Pancreas Pancrea
35 chr5:53217800-53222800 Weak transcription HUES64 Cell Line embryonic stem cell
36 chr5:53218000-53218200 Enhancers Fetal Kidney kidney
37 chr5:53218200-53219800 Weak transcription Fetal Kidney kidney
38 chr5:53218400-53218600 Enhancers Spleen Spleen
39 chr5:53218400-53219000 Enhancers Dnd41 blood
40 chr5:53218600-53219200 Enhancers GM12878-XiMat blood
41 chr5:53218600-53219800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr5:53218800-53219400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr5:53218800-53223000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr5:53219000-53220600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
45 chr5:53219000-53220800 Enhancers Colon Smooth Muscle Colon
46 chr5:53219400-53220400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:53219800-53220200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr5:53219800-53220200 Weak transcription NHDF-Ad bronchial
49 chr5:53219800-53220400 Active TSS Stomach Smooth Muscle stomach
50 chr5:53219800-53220600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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