Variant report

Variant nsv880325
Chromosome Location chr5:8155254-8231744
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:8157600-8158400 Weak transcription Spleen Spleen
2 chr5:8158400-8158600 Enhancers Spleen Spleen
3 chr5:8159800-8160000 Enhancers H9 Cell Line embryonic stem cell
4 chr5:8166000-8166200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:8166200-8166400 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr5:8166200-8166600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
7 chr5:8166200-8166800 ZNF genes & repeats Pancreas Pancrea
8 chr5:8166400-8166600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:8166800-8180800 Weak transcription Pancreas Pancrea
10 chr5:8172600-8173600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:8173600-8174800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr5:8175000-8175200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr5:8176000-8176400 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr5:8176000-8176600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:8176200-8176400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
16 chr5:8176200-8176400 Enhancers Gastric stomach
17 chr5:8176200-8176800 Enhancers Ovary ovary
18 chr5:8176400-8180800 Weak transcription Gastric stomach
19 chr5:8176600-8188200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:8180200-8181600 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr5:8180400-8181400 Enhancers HUES48 Cell Line embryonic stem cell
22 chr5:8180600-8181400 Enhancers H1 Cell Line embryonic stem cell
23 chr5:8180800-8181200 Enhancers Gastric stomach
24 chr5:8180800-8181400 Enhancers H9 Cell Line embryonic stem cell
25 chr5:8180800-8181400 Enhancers HUES6 Cell Line embryonic stem cell
26 chr5:8180800-8181400 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr5:8180800-8181400 Enhancers Pancreas Pancrea
28 chr5:8180800-8181600 Enhancers HUES64 Cell Line embryonic stem cell
29 chr5:8181000-8181400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr5:8181000-8181400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr5:8181200-8181600 Enhancers Cortex derived primary cultured neurospheres brain
32 chr5:8181400-8189400 Weak transcription Pancreas Pancrea
33 chr5:8181600-8182600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr5:8182600-8183200 Enhancers Cortex derived primary cultured neurospheres brain
35 chr5:8186400-8187000 Enhancers Fetal Brain Male brain
36 chr5:8188200-8188400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:8188400-8188800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr5:8188800-8190000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:8189000-8189600 Enhancers Rectal Mucosa Donor 29 rectum
40 chr5:8189000-8190000 Enhancers Dnd41 blood
41 chr5:8189200-8190000 Enhancers Rectal Mucosa Donor 31 rectum
42 chr5:8189400-8190000 Enhancers Pancreas Pancrea
43 chr5:8192400-8193400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
44 chr5:8193000-8193400 Enhancers Primary hematopoietic stem cells short term culture blood
45 chr5:8195800-8196400 Enhancers Fetal Stomach stomach
46 chr5:8206000-8207000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr5:8208000-8213200 Weak transcription Brain Inferior Temporal Lobe brain
48 chr5:8208400-8208800 Enhancers Pancreas Pancrea
49 chr5:8208600-8208800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr5:8208600-8208800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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