Variant report

Variant nsv880525
Chromosome Location chr5:27308254-27447863
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:171 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:27285800-27308400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:27307800-27308400 Enhancers Osteobl bone
3 chr5:27308000-27308600 Enhancers NH-A brain
4 chr5:27308000-27308800 Enhancers NHEK skin
5 chr5:27308200-27308600 Enhancers HMEC breast
6 chr5:27308400-27308800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr5:27308600-27311800 Weak transcription HMEC breast
8 chr5:27308800-27311200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:27308800-27311800 Weak transcription NHEK skin
10 chr5:27309400-27310000 Enhancers HUES48 Cell Line embryonic stem cell
11 chr5:27309400-27313600 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr5:27309600-27309800 Enhancers H9 Cell Line embryonic stem cell
13 chr5:27309600-27310200 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr5:27310000-27310200 Enhancers HUES64 Cell Line embryonic stem cell
15 chr5:27310000-27310200 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr5:27310000-27311200 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr5:27310200-27310800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr5:27310200-27311200 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr5:27310200-27313800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr5:27310800-27312800 Enhancers HUES64 Cell Line embryonic stem cell
21 chr5:27311200-27311400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr5:27311200-27312000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:27311200-27312800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr5:27311200-27313200 Enhancers HUES48 Cell Line embryonic stem cell
25 chr5:27311200-27317800 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr5:27311400-27312400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr5:27311400-27313200 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr5:27311600-27313400 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr5:27311800-27312000 Enhancers H9 Cell Line embryonic stem cell
30 chr5:27311800-27312200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr5:27311800-27312200 Enhancers HMEC breast
32 chr5:27311800-27312200 Enhancers NHEK skin
33 chr5:27311800-27313000 Enhancers HUES6 Cell Line embryonic stem cell
34 chr5:27312000-27312400 Weak transcription H9 Cell Line embryonic stem cell
35 chr5:27312000-27315400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:27312200-27315200 Weak transcription NHEK skin
37 chr5:27312200-27315400 Weak transcription HMEC breast
38 chr5:27312200-27316000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr5:27312400-27312800 Enhancers H9 Cell Line embryonic stem cell
40 chr5:27312400-27312800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr5:27312600-27312800 Enhancers H1 Cell Line embryonic stem cell
42 chr5:27312600-27313000 Enhancers ES-WA7 Cell Line embryonic stem cell
43 chr5:27312800-27315000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr5:27312800-27315200 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr5:27312800-27315400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:27312800-27320600 Weak transcription H1 Cell Line embryonic stem cell
47 chr5:27313000-27316200 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr5:27313200-27315200 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr5:27313200-27315200 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr5:27313400-27315600 Weak transcription ES-I3 Cell Line embryonic stem cell

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