Variant report

Variant nsv880987
Chromosome Location chr5:29051880-29129027
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:29051200-29052400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr5:29052400-29054600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr5:29054200-29054400 Enhancers Fetal Heart heart
4 chr5:29054400-29054800 Enhancers ES-I3 Cell Line embryonic stem cell
5 chr5:29054400-29054800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:29054400-29054800 Flanking Active TSS Fetal Heart heart
7 chr5:29054400-29055000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr5:29054400-29055000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr5:29054600-29054800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:29054800-29055000 Enhancers Fetal Heart heart
11 chr5:29061400-29061800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:29067600-29067800 Enhancers Rectal Mucosa Donor 31 rectum
13 chr5:29067800-29068200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
14 chr5:29067800-29068200 Enhancers Stomach Mucosa stomach
15 chr5:29068000-29068400 Enhancers Rectal Mucosa Donor 29 rectum
16 chr5:29068200-29068400 Active TSS Rectal Mucosa Donor 31 rectum
17 chr5:29068400-29068600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
18 chr5:29068400-29068600 Weak transcription Stomach Mucosa stomach
19 chr5:29068400-29068800 Active TSS Pancreatic Islets Pancreatic Islet
20 chr5:29068400-29069200 Enhancers Pancreas Pancrea
21 chr5:29068400-29069200 Enhancers HepG2 liver
22 chr5:29068400-29070200 Active TSS Rectal Mucosa Donor 29 rectum
23 chr5:29068600-29069000 Active TSS Rectal Mucosa Donor 31 rectum
24 chr5:29068600-29069000 Active TSS Stomach Mucosa stomach
25 chr5:29069000-29069200 Flanking Active TSS Stomach Mucosa stomach
26 chr5:29069000-29069400 Active TSS Rectal Smooth Muscle rectum
27 chr5:29069000-29069600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
28 chr5:29069200-29069600 Enhancers Stomach Mucosa stomach
29 chr5:29069600-29070800 Enhancers Rectal Mucosa Donor 31 rectum
30 chr5:29077400-29078000 Enhancers A549 lung
31 chr5:29077400-29078400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr5:29077400-29078400 Enhancers Hela-S3 cervix
33 chr5:29077600-29078000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:29079200-29080000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr5:29085000-29085800 Enhancers Rectal Mucosa Donor 31 rectum
36 chr5:29090200-29090600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr5:29095400-29095800 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr5:29095600-29096000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr5:29095600-29096000 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr5:29095800-29096200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr5:29097000-29097400 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr5:29102600-29103600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:29105600-29106600 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr5:29105800-29106600 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr5:29106000-29106600 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr5:29106200-29106600 Enhancers HUES48 Cell Line embryonic stem cell
47 chr5:29107000-29107400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr5:29109200-29111200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:29111200-29112200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr5:29112200-29112600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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