Variant report
Variant | nsv881216 |
---|---|
Chromosome Location | chr5:27361816-27464184 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:27371200-27371600 | Enhancers | Esophagus | oesophagus |
2 | chr5:27377800-27378400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
3 | chr5:27378000-27378400 | Enhancers | Placenta Amnion | Placenta Amnion |
4 | chr5:27387000-27389200 | Enhancers | HepG2 | liver |
5 | chr5:27387400-27388200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
6 | chr5:27387600-27388000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
7 | chr5:27387600-27388200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
8 | chr5:27387600-27388200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
9 | chr5:27387600-27388200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
10 | chr5:27387600-27388200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
11 | chr5:27387600-27388800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
12 | chr5:27388200-27389800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
13 | chr5:27388600-27389800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
14 | chr5:27388800-27389800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
15 | chr5:27389200-27389600 | Weak transcription | HepG2 | liver |
16 | chr5:27389600-27390000 | Enhancers | HepG2 | liver |
17 | chr5:27389800-27390000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
18 | chr5:27389800-27390200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
19 | chr5:27392000-27393400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
20 | chr5:27392400-27393600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
21 | chr5:27402600-27404200 | Active TSS | A549 | lung |
22 | chr5:27403000-27403200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
23 | chr5:27403000-27403200 | Enhancers | Hela-S3 | cervix |
24 | chr5:27403200-27403800 | Active TSS | Hela-S3 | cervix |
25 | chr5:27403200-27404000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
26 | chr5:27403400-27403800 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
27 | chr5:27403400-27403800 | Active TSS | Fetal Muscle Leg | muscle |
28 | chr5:27403400-27404000 | Active TSS | HMEC | breast |
29 | chr5:27403400-27404000 | Active TSS | Osteobl | bone |
30 | chr5:27403400-27404200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
31 | chr5:27403600-27404000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
32 | chr5:27410400-27411000 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
33 | chr5:27417800-27418200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
34 | chr5:27434000-27435200 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
35 | chr5:27434200-27435200 | Enhancers | NHEK | skin |
36 | chr5:27435000-27435200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
37 | chr5:27435000-27435400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
38 | chr5:27435000-27435400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
39 | chr5:27435000-27435600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
40 | chr5:27435200-27436200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
41 | chr5:27436200-27436600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr5:27436400-27436600 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
43 | chr5:27436800-27449400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
44 | chr5:27442800-27443200 | Enhancers | Pancreatic Islets | Pancreatic Islet |
45 | chr5:27446600-27449200 | Weak transcription | H9 Cell Line | embryonic stem cell |
46 | chr5:27447600-27448400 | ZNF genes & repeats | Spleen | Spleen |
47 | chr5:27450600-27451200 | Enhancers | Fetal Heart | heart |
48 | chr5:27450800-27451000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
49 | chr5:27450800-27451200 | Enhancers | Rectal Smooth Muscle | rectum |
50 | chr5:27450800-27451400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |