Variant report

Variant	nsv881556
Chromosome Location	chr4:172205108-172491284
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr4:172255667-172256054	GM12878	blood:	n/a	n/a
2	ATF2	chr4:172255624-172256043	GM12878	blood:	n/a	n/a
3	BACH1	chr4:172431444-172431445	K562	blood:	n/a	n/a
4	BATF	chr4:172482626-172482847	GM12878	blood:	n/a	n/a
5	BATF	chr4:172437862-172438152	GM12878	blood:	n/a	n/a
6	BATF	chr4:172482588-172482958	GM12878	blood:	n/a	n/a
7	BATF	chr4:172442956-172443210	GM12878	blood:	n/a	n/a
8	BATF	chr4:172255782-172256095	GM12878	blood:	n/a	n/a
9	BATF	chr4:172351661-172352035	GM12878	blood:	n/a	n/a
10	BATF	chr4:172437873-172438100	GM12878	blood:	n/a	n/a
11	BATF	chr4:172440668-172440899	GM12878	blood:	n/a	n/a
12	BCL11A	chr4:172442922-172443175	GM12878	blood:	n/a	n/a
13	BCL11A	chr4:172255762-172256128	GM12878	blood:	n/a	n/a
14	BHLHE40	chr4:172394476-172394542	GM12878	blood:	n/a	n/a
15	BHLHE40	chr4:172290340-172290372	GM12878	blood:	n/a	n/a
16	CCNT2	chr4:172417411-172417571	K562	blood:	n/a	n/a
17	CCNT2	chr4:172392140-172392340	K562	blood:	n/a	n/a
18	CEBPB	chr4:172356271-172356397	HepG2	liver:	n/a	n/a
19	CEBPB	chr4:172459975-172460213	A549	lung:	n/a	chr4:172460071-172460082 chr4:172460070-172460083 chr4:172460070-172460081 chr4:172460070-172460083
20	CEBPB	chr4:172205318-172205518	HepG2	liver:	n/a	chr4:172205422-172205433
21	CEBPB	chr4:172362417-172362543	Hela-S3	cervix:	n/a	chr4:172362429-172362442 chr4:172362426-172362443 chr4:172362431-172362442 chr4:172362429-172362442 chr4:172362451-172362462 chr4:172362431-172362442
22	CEBPB	chr4:172369099-172369446	IMR90	lung:	n/a	chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369272-172369283 chr4:172369274-172369283 chr4:172369274-172369285
23	CEBPB	chr4:172459966-172460180	K562	blood:	n/a	chr4:172460071-172460082 chr4:172460070-172460083 chr4:172460070-172460081 chr4:172460070-172460083
24	CEBPB	chr4:172369158-172369405	H1-hESC	embryonic stem cell:	n/a	chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369272-172369283 chr4:172369274-172369283 chr4:172369274-172369285
25	CEBPB	chr4:172459911-172460238	Hela-S3	cervix:	n/a	chr4:172460071-172460082 chr4:172460070-172460083 chr4:172460070-172460081 chr4:172460070-172460083
26	CEBPB	chr4:172455378-172455651	IMR90	lung:	n/a	chr4:172455485-172455496 chr4:172455485-172455498
27	CEBPB	chr4:172369109-172369454	HepG2	liver:	n/a	chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369272-172369283 chr4:172369274-172369283 chr4:172369274-172369285
28	CEBPB	chr4:172360395-172360608	HepG2	liver:	n/a	chr4:172360473-172360490
29	CEBPB	chr4:172455324-172455674	HepG2	liver:	n/a	chr4:172455485-172455496 chr4:172455485-172455498
30	CEBPB	chr4:172478592-172478766	H1-hESC	embryonic stem cell:	n/a	n/a
31	CEBPB	chr4:172398667-172398910	HepG2	liver:	n/a	chr4:172398829-172398840
32	CEBPB	chr4:172467371-172467590	K562	blood:	n/a	n/a
33	CEBPB	chr4:172459925-172460246	HepG2	liver:	n/a	chr4:172460071-172460082 chr4:172460070-172460083 chr4:172460070-172460081 chr4:172460070-172460083
34	CEBPB	chr4:172205358-172205548	A549	lung:	n/a	chr4:172205422-172205433
35	CEBPB	chr4:172307255-172307409	HepG2	liver:	n/a	n/a
36	CEBPB	chr4:172433261-172433503	HepG2	liver:	n/a	chr4:172433432-172433443
37	CEBPB	chr4:172369264-172369330	K562	blood:	n/a	chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369274-172369283 chr4:172369272-172369283 chr4:172369274-172369283 chr4:172369274-172369285
38	CEBPB	chr4:172455391-172455591	A549	lung:	n/a	chr4:172455485-172455496 chr4:172455485-172455498
39	CEBPB	chr4:172446966-172447056	HepG2	liver:	n/a	n/a
40	CEBPB	chr4:172455392-172455592	K562	blood:	n/a	chr4:172455485-172455496 chr4:172455485-172455498
41	CTCF	chr4:172361340-172361490	MCF-7	breast:	n/a	n/a
42	CTCF	chr4:172410385-172410457	GM13977	blood:	n/a	n/a
43	CTCF	chr4:172471103-172471176	Kidney_OC	kidney:	n/a	n/a
44	CTCF	chr4:172361300-172361450	GM12871	blood:	n/a	n/a
45	CTCF	chr4:172310274-172310315	Kidney_OC	kidney:	n/a	n/a
46	CTCF	chr4:172263820-172263970	WERI-Rb-1	eye:	n/a	n/a
47	CTCF	chr4:172484926-172485011	Pancreas_OC	pancreas:	n/a	n/a
48	CTCF	chr4:172326380-172326530	HFF-Myc	foreskin:	n/a	n/a
49	CTCF	chr4:172215140-172215290	HCM	heart:	n/a	n/a
50	CTCF	chr4:172256038-172256093	LNCaP	prostate:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:172219751-172219801	IMR90	lung:	fetal
2	chr4:172219751-172219801	GM12892	blood:	n/a
3	chr4:172219751-172219801	U87	brain:	n/a
4	chr4:172219751-172219801	SK-N-SH	brain:	n/a
5	chr4:172219751-172219801	BJ	skin:	n/a
6	chr4:172219751-172219801	HIPEpiC	eye:	n/a
7	chr4:172219751-172219801	NT2-D1	testis:	n/a
8	chr4:172219751-172219801	K562	blood:	n/a
9	chr4:172219751-172219801	HCPEpiC	choroid plexus:	n/a
10	chr4:172219751-172219801	PANC-1	pancreas:	n/a
11	chr4:172219751-172219801	Hela-S3	cervix:	n/a
12	chr4:172219751-172219801	LNCaP	prostate:	n/a
13	chr4:172219751-172219801	H1-hESC	embryonic stem cell:	embryo
14	chr4:172219751-172219801	HNPCEpiC	eye:	n/a
15	chr4:172219751-172219801	CMK	blood:	n/a
16	chr4:172219751-172219801	AG10803	skin:	n/a
17	chr4:172219751-172219801	BE2_C	brain:	n/a
18	chr4:172219751-172219801	Jurkat	blood:	n/a
19	chr4:172219751-172219801	ovcar-3	ovarian:	n/a
20	chr4:172219751-172219801	HUVEC	blood vessel:	n/a
21	chr4:172219751-172219801	SK-N-MC	brain:	n/a
22	chr4:172219751-172219801	AG09319	gingival:	n/a
23	chr4:172219751-172219801	MCF-7	breast:	n/a
24	chr4:172219751-172219801	GM06990	blood:	n/a
25	chr4:172219751-172219801	Hepatocyte	liver:	n/a
26	chr4:172219751-172219801	HRCEpiC	kidney:	n/a
27	chr4:172219751-172219801	SAEC	small airway:	n/a
28	chr4:172219751-172219801	HCM	heart:	n/a
29	chr4:172219751-172219801	HCT-116	colon:	n/a
30	chr4:172219751-172219801	HEEpiC	esophagus:	n/a
31	chr4:172219751-172219801	RPTEC	kidney:	n/a
32	chr4:172219751-172219801	GM12891	blood:	n/a
33	chr4:172219751-172219801	SK-N-SH_RA	brain:	n/a
34	chr4:172219751-172219801	PrEC	prostate:	n/a
35	chr4:172219751-172219801	HMEC	breast:	n/a
36	chr4:172219751-172219801	GM12878	blood:	n/a
37	chr4:172219751-172219801	ProgFib	skin:	n/a
38	chr4:172219751-172219801	HL-60	blood:	n/a
39	chr4:172219751-172219801	Caco-2	colon:	n/a
40	chr4:172219751-172219801	AoSMC	blood vessel:	n/a
41	chr4:172219751-172219801	HCF	heart:	n/a
42	chr4:172219751-172219801	GM19239	blood:	n/a
43	chr4:172219751-172219801	SKMC	muscle:	n/a
44	chr4:172219751-172219801	T-47D	breast:	n/a
45	chr4:172219751-172219801	AG04450	lung:	fetal
46	chr4:172219751-172219801	NB4	blood:	n/a
47	chr4:172219751-172219801	HepG2	liver:	n/a
48	chr4:172219751-172219801	AG09309	skin:	n/a
49	chr4:172219751-172219801	HAEpiC	amniotic membrane:	n/a
50	chr4:172219751-172219801	NHBE	bronchial:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:172430767..172434419-chr4:172434504..172437331,3	K562	blood:
2	chr4:172207640..172210235-chr4:172213745..172216390,2	K562	blood:
3	chr1:214429883..214430693-chr4:172382652..172383247,2	MCF-7	breast:
4	chr4:172430767..172434419-chr4:172434504..172437331,3	K562	blood:
5	chr4:172215180..172217206-chr4:172338805..172340584,2	K562	blood:
6	chr4:172435507..172438081-chr4:172439461..172441174,2	MCF-7	breast:
7	chr4:172435507..172438081-chr4:172439461..172441174,2	MCF-7	breast:
8	chr4:172406443..172409078-chr4:172410535..172412663,2	MCF-7	breast:
9	chr4:172215180..172217206-chr4:172338805..172340584,2	K562	blood:
10	chr4:172212656..172215279-chr4:172273980..172275669,2	K562	blood:
11	chr4:172212656..172215279-chr4:172273980..172275669,2	K562	blood:
12	chr4:172410818..172412907-chr4:172427241..172429415,2	K562	blood:
13	chr4:172207640..172210235-chr4:172213745..172216390,2	K562	blood:
14	chr4:172406443..172409078-chr4:172410535..172412663,2	MCF-7	breast:
15	chr4:172410818..172412907-chr4:172427241..172429415,2	K562	blood:
16	chr4:172358064..172360029-chr4:172362493..172364651,2	MCF-7	breast:
17	chr4:172358064..172360029-chr4:172362493..172364651,2	MCF-7	breast:
18	chr4:172251016..172251858-chr8:105627743..105628264,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GALNTL6-3	chr4:172215603-172216886	ucscGeneNc_uc003isu_1
2	lnc-AADAT-5	chr4:172474151-172474376	XLOC_004159
3	lnc-GALNTL6-3	chr4:172213081-172213143	ucscGeneNc_uc003isu_1
4	lnc-AADAT-5	chr4:172485363-172485418	XLOC_004159
5	lnc-GALNTL6-1	chr4:172209255-172209571	XLOC_003778
6	lnc-AADAT-5	chr4:172485115-172485236	XLOC_004159
7	lnc-GALNTL6-3	chr4:172213554-172213624	ucscGeneNc_uc003isu_1
8	lnc-GALNTL6-3	chr4:172213931-172214064	ucscGeneNc_uc003isu_1
9	lnc-GALNTL6-1	chr4:172207154-172207173	XLOC_003778

Variant related genes	Relation type
ENSG00000248339	TF binding region
ENSG00000251176	TF binding region
ENSG00000248339	CpG island
ENSG00000251176	CpG island
LYSMD3	miRNA target sites
LYSMD1	miRNA target sites

Extended variants
information (count: 2078 )
Associated
traits (count: 73 )

Variant overlapped rSNPs/rCNVs (count:2078 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs533826434	chr4:172209267-172209268	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs558714324	chr4:172209276-172209277	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs554162081	chr4:172209295-172209296	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs573907945	chr4:172209369-172209370	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs543155561	chr4:172209378-172209379	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs543421078	chr4:172209453-172209454	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs139387678	chr4:172209506-172209507	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs188219022	chr4:172209545-172209546	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs563493876	chr4:172213101-172213102	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs372952396	chr4:172213109-172213110	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs183600835	chr4:172213114-172213115	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs148171849	chr4:172213591-172213592	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs58559254	chr4:172213594-172213595	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs184786143	chr4:172213596-172213597	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs552880244	chr4:172213601-172213602	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs190536375	chr4:172213605-172213606	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs570562367	chr4:172213939-172213940	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs566640257	chr4:172213954-172213955	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs144080372	chr4:172213993-172213994	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs546459999	chr4:172214011-172214012	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
21	rs553157323	chr4:172214026-172214027	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
22	rs116736351	chr4:172214044-172214045	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
23	rs541730633	chr4:172214058-172214059	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs558989048	chr4:172214063-172214064	Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
25	rs575180333	chr4:172214113-172214114	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs544226976	chr4:172214145-172214146	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs564306453	chr4:172214157-172214158	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs571185972	chr4:172214160-172214161	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs547911052	chr4:172214180-172214181	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs540339595	chr4:172214188-172214189	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs560737332	chr4:172214191-172214192	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs529465495	chr4:172214193-172214194	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs6833288	chr4:172214200-172214201	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs140916350	chr4:172214207-172214208	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs532029594	chr4:172214215-172214216	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs186922724	chr4:172214266-172214267	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs144473551	chr4:172214300-172214301	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs80173962	chr4:172214317-172214318	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs557023002	chr4:172214395-172214396	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs546338103	chr4:172214397-172214398	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs72981910	chr4:172214412-172214413	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs76595577	chr4:172214442-172214443	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs190009165	chr4:172214443-172214444	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs573938726	chr4:172214461-172214462	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs575189146	chr4:172214509-172214510	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs537714619	chr4:172214515-172214516	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs558153521	chr4:172214524-172214525	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs147485166	chr4:172214543-172214544	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs570383641	chr4:172214550-172214551	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs560419944	chr4:172214571-172214572	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:73)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Wilms tumour	21544195	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	16272173	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	21785460	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21633010	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20581869	CNVD
Hepatocellular carcinoma	16750200	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Neuroblastoma	16790693	CNVD
Schizophrenia	23813976	CNVD
Lung cancer	16773561	CNVD
Colorectal cancer	16774939	CNVD
Myelofibrosis	22110671	CNVD
Developmental delay	22127048	CNVD
Glioblastoma multiforme	22286061	CNVD
Neuroblastoma	21899760	CNVD
Gastric adenocarcinoma	19115996	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Urothelial carcinoma	21177765	CNVD

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:172214000-172215600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:172214600-172215400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:172214800-172215000	Active TSS	Adipose Nuclei	Adipose
4	chr4:172215000-172215600	Flanking Active TSS	Adipose Nuclei	Adipose
5	chr4:172215600-172216000	Enhancers	Adipose Nuclei	Adipose
6	chr4:172219200-172219800	Active TSS	HUES6 Cell Line	embryonic stem cell
7	chr4:172219200-172219800	Active TSS	Placenta	Placenta
8	chr4:172260800-172262200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr4:172261400-172261800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr4:172261400-172261800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr4:172263600-172263800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr4:172263600-172263800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr4:172263800-172264000	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr4:172263800-172264200	Enhancers	H1 Cell Line	embryonic stem cell
15	chr4:172263800-172264200	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr4:172263800-172264200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr4:172263800-172264200	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr4:172263800-172264200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr4:172263800-172264200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr4:172263800-172264400	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr4:172263800-172264400	Enhancers	Primary hematopoietic stem cells	blood
22	chr4:172264000-172264200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
23	chr4:172264200-172264400	Active TSS	Primary hematopoietic stem cells short term culture	blood
24	chr4:172264200-172264800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr4:172264200-172265200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
26	chr4:172269000-172269400	Enhancers	Adipose Nuclei	Adipose
27	chr4:172274200-172275400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr4:172296200-172296600	Enhancers	Fetal Brain Male	brain
29	chr4:172296600-172298400	Weak transcription	Fetal Brain Male	brain
30	chr4:172298400-172299000	Enhancers	Fetal Brain Male	brain
31	chr4:172311400-172312400	Enhancers	Fetal Lung	lung
32	chr4:172317800-172318200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
33	chr4:172321000-172321200	Enhancers	iPS-15b Cell Line	embryonic stem cell
34	chr4:172321200-172322000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
35	chr4:172322000-172322400	Enhancers	H1 Cell Line	embryonic stem cell
36	chr4:172322000-172322400	Enhancers	HUES6 Cell Line	embryonic stem cell
37	chr4:172322000-172322400	Enhancers	HUES64 Cell Line	embryonic stem cell
38	chr4:172322000-172322400	Enhancers	iPS-15b Cell Line	embryonic stem cell
39	chr4:172322400-172326400	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr4:172326000-172326600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr4:172326400-172326600	Enhancers	H1 Cell Line	embryonic stem cell
42	chr4:172326600-172327400	Weak transcription	H1 Cell Line	embryonic stem cell
43	chr4:172327400-172327600	Enhancers	H1 Cell Line	embryonic stem cell
44	chr4:172367400-172368800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr4:172367600-172368600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr4:172381400-172381800	Active TSS	Fetal Heart	heart
47	chr4:172382400-172383000	Enhancers	iPS-18 Cell Line	embryonic stem cell
48	chr4:172382400-172383200	Enhancers	HUES64 Cell Line	embryonic stem cell
49	chr4:172382600-172383000	Active TSS	ES-I3 Cell Line	embryonic stem cell
50	chr4:172394000-172395000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links