Variant report

Variant	nsv881604
Chromosome Location	chr5:52885100-53035301
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:566)
CpG islands
(count:183)
Chromatin interactive
region (count:24)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:566 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:52912798-52913112	K562	blood:	n/a	n/a
2	ARID3A	chr5:52977062-52977065	K562	blood:	n/a	n/a
3	ATF2	chr5:52967202-52967708	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr5:52967286-52967691	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF3	chr5:52897246-52897790	HCT-116	colon:	n/a	n/a
6	BACH1	chr5:52933512-52933590	K562	blood:	n/a	n/a
7	BACH1	chr5:52976004-52976009	K562	blood:	n/a	n/a
8	BRCA1	chr5:53029906-53029966	Hela-S3	cervix:	n/a	n/a
9	CBX3	chr5:52990465-52990754	HCT-116	colon:	n/a	n/a
10	CBX3	chr5:52897424-52897923	HCT-116	colon:	n/a	n/a
11	CBX3	chr5:52990409-52990740	K562	blood:	n/a	n/a
12	CBX3	chr5:52897326-52897906	HCT-116	colon:	n/a	n/a
13	CBX3	chr5:52990423-52990600	K562	blood:	n/a	n/a
14	CEBPB	chr5:52897234-52897830	A549	lung:	n/a	chr5:52897544-52897555
15	CEBPB	chr5:53025799-53026033	HepG2	liver:	n/a	chr5:53025876-53025887
16	CEBPB	chr5:52887696-52887933	H1-hESC	embryonic stem cell:	n/a	n/a
17	CEBPB	chr5:52900234-52900454	A549	lung:	n/a	n/a
18	CEBPB	chr5:52897371-52897781	MCF-7	breast:	n/a	chr5:52897544-52897555
19	CEBPB	chr5:52980129-52980329	HepG2	liver:	n/a	n/a
20	CEBPB	chr5:52897153-52898014	HCT-116	colon:	n/a	chr5:52897544-52897555 chr5:52897965-52897978
21	CEBPB	chr5:52987401-52987686	HepG2	liver:	n/a	chr5:52987504-52987515 chr5:52987546-52987557
22	CEBPB	chr5:52897257-52897908	HCT-116	colon:	n/a	chr5:52897544-52897555
23	CEBPB	chr5:52967330-52967676	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr5:53021867-53022217	MCF-7	breast:	n/a	chr5:53022058-53022069 chr5:53022058-53022071
25	CEBPB	chr5:52897331-52897764	A549	lung:	n/a	chr5:52897544-52897555
26	CEBPB	chr5:52887778-52887890	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr5:52886554-52886762	HepG2	liver:	n/a	chr5:52886679-52886690
28	CEBPB	chr5:53020884-53021084	HepG2	liver:	n/a	chr5:53020925-53020936
29	CEBPB	chr5:52897382-52897801	A549	lung:	n/a	chr5:52897544-52897555
30	CEBPB	chr5:52887634-52888095	MCF-7	breast:	n/a	n/a
31	CEBPB	chr5:52887768-52887913	A549	lung:	n/a	n/a
32	CEBPB	chr5:52897418-52897705	HepG2	liver:	n/a	chr5:52897544-52897555
33	CEBPB	chr5:52987501-52987556	K562	blood:	n/a	chr5:52987504-52987515
34	CEBPB	chr5:52887571-52888077	HCT-116	colon:	n/a	n/a
35	CEBPB	chr5:53020769-53021052	K562	blood:	n/a	chr5:53020925-53020936
36	CEBPB	chr5:52897410-52897727	IMR90	lung:	n/a	chr5:52897544-52897555
37	CEBPB	chr5:52897328-52897762	Hela-S3	cervix:	n/a	chr5:52897544-52897555
38	CEBPB	chr5:52887773-52887910	K562	blood:	n/a	n/a
39	CEBPB	chr5:52899763-52899963	A549	lung:	n/a	n/a
40	CEBPB	chr5:52980227-52980347	K562	blood:	n/a	n/a
41	CEBPB	chr5:52886584-52886769	IMR90	lung:	n/a	chr5:52886679-52886690
42	CEBPD	chr5:52912725-52913120	K562	blood:	n/a	n/a
43	CREB1	chr5:52967236-52967713	H1-hESC	embryonic stem cell:	n/a	n/a
44	CTCF	chr5:53029828-53029990	GM12891	blood:	n/a	n/a
45	CTCF	chr5:53029840-53029990	HCT-116	colon:	n/a	n/a
46	CTCF	chr5:53029788-53030053	MCF-7	breast:	n/a	n/a
47	CTCF	chr5:53029826-53030002	GM19239	blood:	n/a	n/a
48	CTCF	chr5:53029820-53029970	HMEC	breast:	n/a	n/a
49	CTCF	chr5:53029920-53030070	HFF-Myc	foreskin:	n/a	n/a
50	CTCF	chr5:53029803-53030011	A549	lung:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:52929435-52929485	NB4	blood:	n/a
2	chr5:52937992-52938042	Jurkat	blood:	n/a
3	chr5:52937992-52938042	AoSMC	blood vessel:	n/a
4	chr5:52937992-52938042	AG04449	skin:	fetal
5	chr5:52937992-52938042	MCF-7	breast:	n/a
6	chr5:52937992-52938042	PrEC	prostate:	n/a
7	chr5:52929435-52929485	AG09319	gingival:	n/a
8	chr5:52907653-52907703	HIPEpiC	eye:	n/a
9	chr5:52929435-52929485	AG10803	skin:	n/a
10	chr5:52907653-52907703	HUVEC	blood vessel:	n/a
11	chr5:52907653-52907703	HNPCEpiC	eye:	n/a
12	chr5:52929435-52929485	ovcar-3	ovarian:	n/a
13	chr5:52929435-52929485	BJ	skin:	n/a
14	chr5:52907653-52907703	U87	brain:	n/a
15	chr5:52907653-52907703	AG04450	lung:	fetal
16	chr5:52937992-52938042	HEEpiC	esophagus:	n/a
17	chr5:52907653-52907703	HepG2	liver:	n/a
18	chr5:52907653-52907703	HRE	kidney:	n/a
19	chr5:52907653-52907703	PANC-1	pancreas:	n/a
20	chr5:52929435-52929485	HIPEpiC	eye:	n/a
21	chr5:52929435-52929485	PrEC	prostate:	n/a
22	chr5:52907653-52907703	HL-60	blood:	n/a
23	chr5:52907653-52907703	PrEC	prostate:	n/a
24	chr5:52929435-52929485	A549	lung:	n/a
25	chr5:52929435-52929485	HAEpiC	amniotic membrane:	n/a
26	chr5:52937992-52938042	GM12891	blood:	n/a
27	chr5:52929435-52929485	HMEC	breast:	n/a
28	chr5:52907653-52907703	ProgFib	skin:	n/a
29	chr5:52907653-52907703	Hela-S3	cervix:	n/a
30	chr5:52929435-52929485	NHBE	bronchial:	n/a
31	chr5:52937992-52938042	HCT-116	colon:	n/a
32	chr5:52937992-52938042	SK-N-MC	brain:	n/a
33	chr5:52907653-52907703	RPTEC	kidney:	n/a
34	chr5:52907653-52907703	HCM	heart:	n/a
35	chr5:52907653-52907703	SK-N-MC	brain:	n/a
36	chr5:52929435-52929485	ECC-1	luminal epithelium:	n/a
37	chr5:52907653-52907703	T-47D	breast:	n/a
38	chr5:52929435-52929485	ProgFib	skin:	n/a
39	chr5:52937992-52938042	GM06990	blood:	n/a
40	chr5:52937992-52938042	ovcar-3	ovarian:	n/a
41	chr5:52929435-52929485	H1-hESC	embryonic stem cell:	embryo
42	chr5:52937992-52938042	HCPEpiC	choroid plexus:	n/a
43	chr5:52907653-52907703	PFSK-1	brain:	n/a
44	chr5:52929435-52929485	Hela-S3	cervix:	n/a
45	chr5:52937992-52938042	ProgFib	skin:	n/a
46	chr5:52929435-52929485	AG04449	skin:	fetal
47	chr5:52907653-52907703	SKMC	muscle:	n/a
48	chr5:52929435-52929485	GM19239	blood:	n/a
49	chr5:52929435-52929485	AG09309	skin:	n/a
50	chr5:52907653-52907703	Jurkat	blood:	n/a

(count:24 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:52937426..52940378-chr5:52949500..52951395,2	K562	blood:
2	chr5:52943856..52946285-chr5:52969298..52971904,2	K562	blood:
3	chr5:52773786..52776884-chr5:53020052..53023482,4	MCF-7	breast:
4	chr5:53010083..53010835-chr5:53021599..53022271,2	MCF-7	breast:
5	chr5:53010083..53010835-chr5:53021599..53022271,2	MCF-7	breast:
6	chr5:52908310..52911077-chr5:52926707..52930021,3	MCF-7	breast:
7	chr5:52987183..52989116-chr5:52991763..52994234,2	K562	blood:
8	chr5:53029076..53030387-chr5:53166234..53167555,10	MCF-7	breast:
9	chr5:52893268..52895958-chr5:52895998..52899477,3	K562	blood:
10	chr5:53029523..53030741-chr5:53166540..53167569,3	MCF-7	breast:
11	chr5:52949154..52951905-chr5:52952364..52954832,2	MCF-7	breast:
12	chr5:52937426..52940378-chr5:52949500..52951395,2	K562	blood:
13	chr5:52777916..52780456-chr5:53034020..53036335,2	MCF-7	breast:
14	chr5:52943856..52946285-chr5:52969298..52971904,2	K562	blood:
15	chr12:120729419..120730102-chr5:52897586..52898089,2	HCT-116	colon:
16	chr5:52772745..52773247-chr5:53021978..53022710,2	MCF-7	breast:
17	chr5:52964952..52966941-chr5:52970691..52973643,2	K562	blood:
18	chr5:52987183..52989116-chr5:52991763..52994234,2	K562	blood:
19	chr5:52964952..52966941-chr5:52970691..52973643,2	K562	blood:
20	chr5:52772594..52773194-chr5:52899890..52900738,2	MCF-7	breast:
21	chr5:52949154..52951905-chr5:52952364..52954832,2	MCF-7	breast:
22	chr5:52893268..52895958-chr5:52895998..52899477,3	K562	blood:
23	chr5:52908310..52911077-chr5:52926707..52930021,3	MCF-7	breast:
24	chr5:52861548..52863990-chr5:52926971..52929955,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FST-1	chr5:52967196-52968051	ENSG00000248194
2	lnc-FST-1	chr5:52965911-52967033	ENSG00000248194

No data

Variant related genes	Relation type
NDUFS4	TF binding region
ENSG00000238508	TF binding region
NDUFS4	CpG island
ENSG00000238508	CpG island
ENSG00000134363	chromatin interactions
ENSG00000202538	chromatin interactions
IPO5	miRNA target sites
CDKN1B	miRNA target sites

Extended variants
information (count: 4816 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:4816 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1994648	chr5:52885100-52885101	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs571297567	chr5:52885212-52885213	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs538653273	chr5:52885255-52885256	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs554080886	chr5:52885298-52885299	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs572373342	chr5:52885299-52885300	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs542419102	chr5:52885302-52885303	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs370188239	chr5:52885315-52885316	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs16881521	chr5:52885336-52885337	Weak transcription Strong transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs143867216	chr5:52885416-52885417	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs146873578	chr5:52885425-52885426	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs576795837	chr5:52885442-52885443	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs541026571	chr5:52885479-52885480	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs559576228	chr5:52885485-52885486	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs557974424	chr5:52885488-52885489	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs34312750	chr5:52885501-52885502	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs530463800	chr5:52885531-52885532	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs548494351	chr5:52885542-52885543	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs140732553	chr5:52885566-52885567	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs35438459	chr5:52885574-52885575	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs531291141	chr5:52885631-52885632	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs549867538	chr5:52885660-52885661	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs571387467	chr5:52885678-52885679	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs538591914	chr5:52885698-52885699	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs376923009	chr5:52885756-52885757	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs576178766	chr5:52885788-52885789	Weak transcription Enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs536598424	chr5:52885807-52885808	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs554447335	chr5:52885814-52885815	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs576223890	chr5:52885822-52885823	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs536869855	chr5:52885842-52885843	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs16881524	chr5:52885883-52885884	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs375952911	chr5:52885894-52885895	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs576931550	chr5:52885924-52885925	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs562208223	chr5:52885934-52885935	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs114087793	chr5:52885943-52885944	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs201270681	chr5:52885946-52885947	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs376264362	chr5:52885953-52885954	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs72751836	chr5:52885954-52885955	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs575010122	chr5:52885955-52885956	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs542543277	chr5:52886066-52886067	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs370827165	chr5:52886138-52886139	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs149982480	chr5:52886140-52886141	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs145215844	chr5:52886153-52886154	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs369302553	chr5:52886165-52886166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs552807498	chr5:52886167-52886168	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs188009314	chr5:52886200-52886201	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs532287580	chr5:52886247-52886248	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs547414731	chr5:52886267-52886268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs180776241	chr5:52886422-52886423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs536143020	chr5:52886495-52886496	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs541097206	chr5:52886498-52886499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Cancer	16751803	CNVD
Autism	22495311	CNVD
Intellectual disability	22102821	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Esophageal cancer	20955586	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
adenomatous polyposis	22470819	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21364760	CNVD
Oral cancer	21386901	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Bladder cancer	21909424	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Lung cancer	21911935	CNVD
Breast cancer	17133270	CNVD
Breast cancer	19602461	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Renal cell carcinoma	18194544	CNVD

Chromatin state (count:1926 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:52857800-52892800	Weak transcription	Primary B cells from cord blood	blood
2	chr5:52857800-52898800	Weak transcription	HSMM	muscle
3	chr5:52858000-52899800	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr5:52858000-52900400	Weak transcription	Fetal Kidney	kidney
5	chr5:52858200-52897200	Weak transcription	NHEK	skin
6	chr5:52858400-52895000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr5:52858400-52899800	Weak transcription	Rectal Mucosa Donor 29	rectum
8	chr5:52860000-52909000	Weak transcription	Small Intestine	intestine
9	chr5:52860200-52885600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr5:52861600-52894600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr5:52865000-52900400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr5:52865200-52885200	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr5:52865600-52898400	Weak transcription	Fetal Lung	lung
14	chr5:52865600-52899800	Weak transcription	Primary hematopoietic stem cells	blood
15	chr5:52867600-52888400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr5:52868200-52885200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr5:52869600-52896000	Weak transcription	Fetal Stomach	stomach
18	chr5:52870200-52892000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr5:52872000-52892800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr5:52873000-52887000	Weak transcription	Brain Hippocampus Middle	brain
21	chr5:52873000-52889200	Weak transcription	A549	lung
22	chr5:52873000-52900400	Weak transcription	Gastric	stomach
23	chr5:52873200-52899000	Weak transcription	Right Atrium	heart
24	chr5:52873400-52885400	Weak transcription	Left Ventricle	heart
25	chr5:52873400-52889800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr5:52874400-52885200	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chr5:52874400-52888400	Weak transcription	Fetal Heart	heart
28	chr5:52874600-52889800	Weak transcription	HepG2	liver
29	chr5:52875000-52885400	Weak transcription	Aorta	Aorta
30	chr5:52875000-52900000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr5:52875400-52899200	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr5:52875600-52889400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr5:52876800-52907400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr5:52877400-52885800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr5:52877400-52900400	Weak transcription	Sigmoid Colon	Sigmoid Colon
36	chr5:52877600-52898800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr5:52878400-52885400	Weak transcription	Psoas Muscle	Psoas
38	chr5:52878400-52899000	Weak transcription	Ovary	ovary
39	chr5:52878400-52901200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
40	chr5:52879600-52895200	Weak transcription	Fetal Intestine Large	intestine
41	chr5:52883000-52900200	Weak transcription	Primary T cells fromperipheralblood	blood
42	chr5:52883400-52893000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr5:52884200-52885200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr5:52884200-52900400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
45	chr5:52884400-52888800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
46	chr5:52884400-52897200	Weak transcription	HMEC	breast
47	chr5:52884800-52885400	Enhancers	Adipose Nuclei	Adipose
48	chr5:52884800-52885600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr5:52884800-52885800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
50	chr5:52884800-52885800	Enhancers	Skeletal Muscle Female	skeletal muscle

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