Variant report

Variant	nsv882396
Chromosome Location	chr5:96849023-97126520
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:96869893-96870174	HepG2	liver:	n/a	n/a
2	ATF1	chr5:96925354-96925372	K562	blood:	n/a	n/a
3	ATF2	chr5:96883636-96884569	GM12878	blood:	n/a	n/a
4	ATF2	chr5:96883703-96884520	GM12878	blood:	n/a	n/a
5	BACH1	chr5:96885956-96886136	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr5:96861461-96861877	H1-hESC	embryonic stem cell:	n/a	n/a
7	BATF	chr5:96872429-96872695	GM12878	blood:	n/a	chr5:96872552-96872563
8	BATF	chr5:96872418-96872668	GM12878	blood:	n/a	chr5:96872552-96872563
9	BATF	chr5:96884044-96884526	GM12878	blood:	n/a	chr5:96884341-96884350
10	BATF	chr5:96883741-96884022	GM12878	blood:	n/a	n/a
11	BATF	chr5:96883695-96884539	GM12878	blood:	n/a	chr5:96884341-96884350
12	BCL11A	chr5:96883801-96884003	GM12878	blood:	n/a	chr5:96883828-96883837
13	BCL11A	chr5:96884015-96884504	GM12878	blood:	n/a	n/a
14	BCL11A	chr5:96884033-96884506	GM12878	blood:	n/a	n/a
15	BCL3	chr5:96928285-96928637	GM12878	blood:	n/a	n/a
16	BHLHE40	chr5:96869825-96870150	GM12878	blood:	n/a	n/a
17	BHLHE40	chr5:96883684-96884500	GM12878	blood:	n/a	n/a
18	BRCA1	chr5:97092073-97092104	GM12878	blood:	n/a	n/a
19	CEBPB	chr5:96869838-96870259	MCF-7	breast:	n/a	chr5:96870105-96870116
20	CEBPB	chr5:97100392-97100766	HepG2	liver:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
21	CEBPB	chr5:96889595-96889861	Hela-S3	cervix:	n/a	chr5:96889732-96889743 chr5:96889717-96889728
22	CEBPB	chr5:97100431-97100718	A549	lung:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
23	CEBPB	chr5:96928194-96928475	HepG2	liver:	n/a	chr5:96928315-96928326
24	CEBPB	chr5:96889557-96889904	HepG2	liver:	n/a	chr5:96889732-96889743 chr5:96889717-96889728
25	CEBPB	chr5:97100307-97100770	MCF-7	breast:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
26	CEBPB	chr5:96984266-96984278	K562	blood:	n/a	n/a
27	CEBPB	chr5:96889539-96889927	IMR90	lung:	n/a	chr5:96889732-96889743 chr5:96889717-96889728
28	CEBPB	chr5:96958443-96958670	A549	lung:	n/a	chr5:96958584-96958595 chr5:96958604-96958615
29	CEBPB	chr5:96869919-96870277	A549	lung:	n/a	chr5:96870105-96870116
30	CEBPB	chr5:96869919-96870296	Hela-S3	cervix:	n/a	chr5:96870105-96870116
31	CEBPB	chr5:96889795-96889802	K562	blood:	n/a	n/a
32	CEBPB	chr5:97070883-97071301	IMR90	lung:	n/a	n/a
33	CEBPB	chr5:96869858-96870217	H1-hESC	embryonic stem cell:	n/a	chr5:96870105-96870116
34	CEBPB	chr5:97100388-97100797	Hela-S3	cervix:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
35	CEBPB	chr5:97100304-97100855	MCF-7	breast:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
36	CEBPB	chr5:96869911-96870297	HepG2	liver:	n/a	chr5:96870105-96870116
37	CEBPB	chr5:96869836-96870407	IMR90	lung:	n/a	chr5:96870105-96870116
38	CEBPB	chr5:96984131-96984412	HepG2	liver:	n/a	chr5:96984229-96984240
39	CEBPB	chr5:96930445-96930679	IMR90	lung:	n/a	n/a
40	CEBPB	chr5:97100446-97100707	K562	blood:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
41	CEBPB	chr5:96869837-96870355	MCF-7	breast:	n/a	chr5:96870105-96870116
42	CEBPB	chr5:97121118-97121214	HepG2	liver:	n/a	n/a
43	CEBPB	chr5:96869872-96870368	A549	lung:	n/a	chr5:96870105-96870116
44	CEBPB	chr5:97085589-97085836	HepG2	liver:	n/a	chr5:97085700-97085711
45	CEBPB	chr5:96984114-96984366	A549	lung:	n/a	chr5:96984229-96984240
46	CEBPB	chr5:97100346-97100779	IMR90	lung:	n/a	chr5:97100575-97100586 chr5:97100573-97100586 chr5:97100573-97100584
47	CEBPB	chr5:96869955-96870234	K562	blood:	n/a	chr5:96870105-96870116
48	CEBPB	chr5:96889560-96889890	A549	lung:	n/a	chr5:96889732-96889743 chr5:96889717-96889728
49	CEBPB	chr5:97032370-97032668	HepG2	liver:	n/a	chr5:97032528-97032539
50	CEBPB	chr5:96958462-96958749	HepG2	liver:	n/a	chr5:96958584-96958595 chr5:96958604-96958615

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:96890257-96890307	NB4	blood:	n/a
2	chr5:96855476-96855526	LNCaP	prostate:	n/a
3	chr5:96876834-96876884	PrEC	prostate:	n/a
4	chr5:96890257-96890307	MCF-7	breast:	n/a
5	chr5:96855476-96855526	Jurkat	blood:	n/a
6	chr5:96855476-96855526	HIPEpiC	eye:	n/a
7	chr5:96890257-96890307	IMR90	lung:	fetal
8	chr5:96915770-96915820	HNPCEpiC	eye:	n/a
9	chr5:96915770-96915820	ovcar-3	ovarian:	n/a
10	chr5:96881859-96881909	CMK	blood:	n/a
11	chr5:96855476-96855526	Hepatocyte	liver:	n/a
12	chr5:96890257-96890307	PANC-1	pancreas:	n/a
13	chr5:96876834-96876884	SK-N-MC	brain:	n/a
14	chr5:96881859-96881909	PANC-1	pancreas:	n/a
15	chr5:96881859-96881909	ovcar-3	ovarian:	n/a
16	chr5:96915770-96915820	CMK	blood:	n/a
17	chr5:96876834-96876884	BE2_C	brain:	n/a
18	chr5:96855476-96855526	Hela-S3	cervix:	n/a
19	chr5:96915770-96915820	SK-N-MC	brain:	n/a
20	chr5:96890257-96890307	HUVEC	blood vessel:	n/a
21	chr5:96855476-96855526	HUVEC	blood vessel:	n/a
22	chr5:96855476-96855526	HepG2	liver:	n/a
23	chr5:96855476-96855526	A549	lung:	n/a
24	chr5:96881859-96881909	HCM	heart:	n/a
25	chr5:96876834-96876884	HPAEpiC	pulmonary alveolar:	n/a
26	chr5:96876834-96876884	U87	brain:	n/a
27	chr5:96855476-96855526	AG10803	skin:	n/a
28	chr5:96915770-96915820	AG09309	skin:	n/a
29	chr5:96881859-96881909	NT2-D1	testis:	n/a
30	chr5:96915770-96915820	NH-A	brain:	n/a
31	chr5:96876834-96876884	GM12878	blood:	n/a
32	chr5:96876834-96876884	SAEC	small airway:	n/a
33	chr5:96915770-96915820	GM12892	blood:	n/a
34	chr5:96890257-96890307	GM12891	blood:	n/a
35	chr5:96890257-96890307	HL-60	blood:	n/a
36	chr5:96855476-96855526	T-47D	breast:	n/a
37	chr5:96915770-96915820	AG09319	gingival:	n/a
38	chr5:96890257-96890307	Hepatocyte	liver:	n/a
39	chr5:96855476-96855526	AG04450	lung:	fetal
40	chr5:96890257-96890307	CMK	blood:	n/a
41	chr5:96890257-96890307	HMEC	breast:	n/a
42	chr5:96915770-96915820	HepG2	liver:	n/a
43	chr5:96855476-96855526	SK-N-SH_RA	brain:	n/a
44	chr5:96855476-96855526	SAEC	small airway:	n/a
45	chr5:96890257-96890307	H1-hESC	embryonic stem cell:	embryo
46	chr5:96881859-96881909	SK-N-MC	brain:	n/a
47	chr5:96855476-96855526	AG04449	skin:	fetal
48	chr5:96890257-96890307	ProgFib	skin:	n/a
49	chr5:96876834-96876884	ovcar-3	ovarian:	n/a
50	chr5:96855476-96855526	HNPCEpiC	eye:	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:96869180..96869850-chr5:98103055..98104021,2	MCF-7	breast:
2	chr5:96632479..96633406-chr5:96869339..96870359,6	MCF-7	breast:
3	chr5:97063042..97065906-chr5:97067363..97069421,2	MCF-7	breast:
4	chr5:97113626..97116438-chr5:97121561..97123647,2	K562	blood:
5	chr5:96898495..96900851-chr5:96905056..96906917,2	K562	blood:
6	chr5:97027188..97030158-chr5:97031253..97033564,2	K562	blood:
7	chr5:96902855..96905560-chr5:96907320..96909656,2	K562	blood:
8	chr5:96632616..96633407-chr5:96869853..96870506,3	MCF-7	breast:
9	chr5:96902855..96905560-chr5:96907320..96909656,2	K562	blood:
10	chr5:96566460..96567205-chr5:96869494..96870442,2	MCF-7	breast:
11	chr5:96865281..96867677-chr5:96867921..96869530,2	K562	blood:
12	chr5:96865281..96867677-chr5:96867921..96869530,2	K562	blood:
13	chr5:97027188..97030158-chr5:97031253..97033564,2	K562	blood:
14	chr5:96898495..96900851-chr5:96905056..96906917,2	K562	blood:
15	chr5:97063042..97065906-chr5:97067363..97069421,2	MCF-7	breast:
16	chr5:96987103..96987619-chr5:97253568..97254119,2	MCF-7	breast:
17	chr5:97113626..97116438-chr5:97121561..97123647,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTD-2215E18.1.1-2	chr5:97004255-97004366	NR_105028
2	lnc-CTD-2215E18.1.1-6	chr5:97073598-97074617	NONHSAT102935
3	lnc-CTD-2215E18.1.1-2	chr5:97006297-97006750	NONHSAT102931
4	lnc-CTD-2215E18.1.1-2	chr5:97006298-97006750	XLOC_004483
5	lnc-CTD-2215E18.1.1-2	chr5:97004255-97004366	XLOC_004483
6	lnc-CTD-2215E18.1.1-2	chr5:96856933-96856994	NR_105028
7	lnc-CTD-2215E18.1.1-2	chr5:96856932-96856994	NONHSAT102931
8	lnc-CTD-2215E18.1.1-2	chr5:97006298-97006755	NR_105028
9	lnc-CTD-2215E18.1.1-2	chr5:96856933-96856994	XLOC_004483
10	lnc-CTD-2215E18.1.1-2	chr5:97004254-97004366	NONHSAT102931

Variant related genes	Relation type
ENSG00000248931	TF binding region
ENSG00000251193	TF binding region
ENSG00000248931	CpG island
ENSG00000251193	CpG island

Extended variants
information (count: 5328 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:5328 , 50 per page) page: 1 2 3 4 5 6 7 ... 107

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs576392982	chr5:96856950-96856951	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs187958419	chr5:96856966-96856967	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs555519729	chr5:96856978-96856979	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs370291647	chr5:96856980-96856981	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs191318812	chr5:96856990-96856991	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs113067925	chr5:96861204-96861205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs144466934	chr5:96861205-96861206	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs554319273	chr5:96861212-96861213	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs566249305	chr5:96861222-96861223	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs545078694	chr5:96861280-96861281	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs150671853	chr5:96861334-96861335	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs558140446	chr5:96861335-96861336	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs576384852	chr5:96861341-96861342	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs189276926	chr5:96861381-96861382	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs368349841	chr5:96861437-96861438	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs139849474	chr5:96861441-96861442	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs561868030	chr5:96861450-96861451	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs111709275	chr5:96861483-96861484	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs544236501	chr5:96861487-96861488	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs541687110	chr5:96861490-96861491	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs192700031	chr5:96861518-96861519	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs372340202	chr5:96861653-96861654	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs572590049	chr5:96861674-96861675	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs546272133	chr5:96861726-96861727	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs551622280	chr5:96861727-96861728	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs564568027	chr5:96861773-96861774	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs185578892	chr5:96861781-96861782	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs62378526	chr5:96861802-96861803	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs548269013	chr5:96861817-96861818	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs144963885	chr5:96861825-96861826	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs375818722	chr5:96861840-96861841	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs547686755	chr5:96861911-96861912	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs565892544	chr5:96861952-96861953	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs533646434	chr5:96861985-96861986	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs189302072	chr5:96862004-96862005	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs376885336	chr5:96862012-96862013	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs570206256	chr5:96862065-96862066	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs537481325	chr5:96862075-96862076	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs180933605	chr5:96862104-96862105	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs58336182	chr5:96862131-96862132	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs574665626	chr5:96862136-96862137	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs561483294	chr5:96862165-96862166	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs186410561	chr5:96862189-96862190	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs35699661	chr5:96862190-96862191	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs535707399	chr5:96862202-96862203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs189705850	chr5:96862255-96862256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs572314983	chr5:96862265-96862266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs527302465	chr5:96862328-96862329	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs531255834	chr5:96862345-96862346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs140389747	chr5:96862386-96862387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Testicular cancer	18059402	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Mental retardation	19471318	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Non-syndromic sensorineural hearing loss	19036926	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
Bipolar disorder	19214233	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:594 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:96861200-96862000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr5:96861200-96862200	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr5:96861400-96861800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:96861400-96861800	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr5:96861400-96862000	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr5:96861400-96862000	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr5:96861400-96862000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr5:96861400-96862000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr5:96861400-96862200	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr5:96861400-96862200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
11	chr5:96861400-96862200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr5:96861400-96862200	Enhancers	Monocytes-CD14+_RO01746	blood
13	chr5:96861800-96864600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr5:96862000-96864000	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr5:96862000-96864000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr5:96862000-96864000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr5:96862000-96867000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr5:96862200-96866800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr5:96862200-96867000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
20	chr5:96862200-96867200	Weak transcription	Monocytes-CD14+_RO01746	blood
21	chr5:96863800-96864400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr5:96863800-96864800	Enhancers	Brain Substantia Nigra	brain
23	chr5:96863800-96865000	Enhancers	Muscle Satellite Cultured Cells	--
24	chr5:96864000-96864200	Enhancers	ES-I3 Cell Line	embryonic stem cell
25	chr5:96864000-96864200	Enhancers	HUES48 Cell Line	embryonic stem cell
26	chr5:96864000-96864200	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr5:96864000-96864400	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr5:96864000-96864600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr5:96864000-96865000	Enhancers	Fetal Muscle Leg	muscle
30	chr5:96864000-96865400	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr5:96864000-96865600	Enhancers	Brain Germinal Matrix	brain
32	chr5:96864000-96865600	Enhancers	HSMMtube	muscle
33	chr5:96864000-96865800	Enhancers	NHDF-Ad	bronchial
34	chr5:96864200-96864600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr5:96864200-96865000	Enhancers	Brain Cingulate Gyrus	brain
36	chr5:96864200-96865000	Enhancers	Fetal Stomach	stomach
37	chr5:96864200-96865400	Enhancers	Osteobl	bone
38	chr5:96864200-96865600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr5:96864200-96865800	Enhancers	HSMM	muscle
40	chr5:96864400-96865200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr5:96864400-96865800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr5:96864400-96865800	Enhancers	HUVEC	blood vessel
43	chr5:96864600-96864800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr5:96864600-96865000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr5:96864600-96865000	Enhancers	Ovary	ovary
46	chr5:96864600-96865200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr5:96864600-96865800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr5:96864600-96865800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr5:96864600-96865800	Enhancers	NHEK	skin
50	chr5:96864800-96865000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links