Variant report

Variant nsv882576
Chromosome Location chr5:104438758-104642014
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:104446800-104447200 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr5:104451200-104451400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
3 chr5:104453600-104455000 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr5:104459600-104460200 Enhancers Pancreatic Islets Pancreatic Islet
5 chr5:104468200-104468800 Enhancers Brain Germinal Matrix brain
6 chr5:104469400-104470600 Enhancers Liver Liver
7 chr5:104472600-104473200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:104473200-104474200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr5:104474200-104474400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr5:104485600-104486600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:104486000-104486600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr5:104488800-104489000 Enhancers Fetal Lung lung
13 chr5:104489000-104490800 Weak transcription Fetal Lung lung
14 chr5:104490800-104491200 ZNF genes & repeats Fetal Lung lung
15 chr5:104492600-104492800 ZNF genes & repeats Aorta Aorta
16 chr5:104492800-104494200 Weak transcription Aorta Aorta
17 chr5:104494000-104495600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:104503600-104504400 Enhancers HUES48 Cell Line embryonic stem cell
19 chr5:104503800-104504400 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr5:104503800-104504600 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr5:104503800-104504600 Enhancers Hela-S3 cervix
22 chr5:104504400-104505400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr5:104505800-104506000 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:104512000-104512400 Active TSS Breast Myoepithelial Primary Cells Breast
25 chr5:104541800-104542600 Enhancers Brain Germinal Matrix brain
26 chr5:104550000-104550400 Enhancers HUES48 Cell Line embryonic stem cell
27 chr5:104550200-104550600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr5:104550200-104550600 Enhancers HUES6 Cell Line embryonic stem cell
29 chr5:104550200-104550600 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr5:104550200-104550800 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr5:104550400-104550600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr5:104550600-104552600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr5:104550800-104554800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr5:104552600-104553600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:104553000-104553800 Enhancers Brain Germinal Matrix brain
36 chr5:104553200-104554200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr5:104553600-104555200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr5:104554200-104554600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr5:104554600-104555400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr5:104554800-104555200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr5:104555000-104556600 Enhancers Primary hematopoietic stem cells blood
42 chr5:104555200-104555400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:104555400-104555800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr5:104555800-104557400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr5:104556200-104556600 Active TSS Primary T helper cells PMA-I stimulated --
46 chr5:104565200-104565400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:104565400-104565800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:104565600-104566600 Enhancers K562 blood
49 chr5:104565800-104566800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr5:104565800-104566800 Enhancers Colon Smooth Muscle Colon

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