Variant report

Variant	nsv882748
Chromosome Location	chr5:115584159-115669950
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:426)
CpG islands
(count:122)
Chromatin interactive
region (count:13)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:426 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr5:115614176-115614178	K562	blood:	n/a	n/a
2	BATF	chr5:115609200-115609492	GM12878	blood:	n/a	chr5:115609356-115609366 chr5:115609352-115609362 chr5:115609355-115609366
3	BATF	chr5:115609206-115609493	GM12878	blood:	n/a	chr5:115609356-115609366 chr5:115609352-115609362 chr5:115609355-115609366
4	CBX3	chr5:115644114-115644421	K562	blood:	n/a	n/a
5	CBX3	chr5:115612653-115612965	K562	blood:	n/a	n/a
6	CBX3	chr5:115644032-115644480	HCT-116	colon:	n/a	n/a
7	CBX3	chr5:115644136-115644420	K562	blood:	n/a	n/a
8	CBX3	chr5:115612735-115612979	K562	blood:	n/a	n/a
9	CBX3	chr5:115612612-115613059	HCT-116	colon:	n/a	n/a
10	CEBPB	chr5:115635639-115636210	MCF-7	breast:	n/a	chr5:115635913-115635925
11	CEBPB	chr5:115632480-115632726	HepG2	liver:	n/a	n/a
12	CEBPB	chr5:115658782-115659034	HepG2	liver:	n/a	chr5:115658862-115658873
13	CEBPB	chr5:115584119-115584488	MCF-7	breast:	n/a	chr5:115584298-115584309 chr5:115584300-115584311
14	CEBPB	chr5:115608357-115608659	A549	lung:	n/a	chr5:115608483-115608494
15	CEBPB	chr5:115615956-115616164	HepG2	liver:	n/a	n/a
16	CEBPB	chr5:115658862-115658938	A549	lung:	n/a	chr5:115658862-115658873
17	CEBPB	chr5:115612611-115612811	A549	lung:	n/a	n/a
18	CEBPB	chr5:115608311-115608872	IMR90	lung:	n/a	chr5:115608483-115608494
19	CEBPB	chr5:115584135-115584482	HepG2	liver:	n/a	chr5:115584298-115584309 chr5:115584300-115584311
20	CEBPB	chr5:115608381-115608622	HepG2	liver:	n/a	chr5:115608483-115608494
21	CEBPB	chr5:115584226-115584373	HepG2	liver:	n/a	chr5:115584298-115584309 chr5:115584300-115584311
22	CEBPB	chr5:115608269-115608767	MCF-7	breast:	n/a	chr5:115608483-115608494
23	CEBPB	chr5:115601292-115601498	HepG2	liver:	n/a	n/a
24	CEBPB	chr5:115584254-115584389	K562	blood:	n/a	chr5:115584298-115584309 chr5:115584300-115584311
25	CEBPB	chr5:115608227-115608718	MCF-7	breast:	n/a	chr5:115608483-115608494
26	CHD2	chr5:115609186-115609453	GM12878	blood:	n/a	n/a
27	CHD2	chr5:115608466-115608624	GM12878	blood:	n/a	n/a
28	CTCF	chr5:115608300-115608651	GM12878	blood:	n/a	n/a
29	CTCF	chr5:115608080-115608230	BE2_C	brain:	n/a	n/a
30	CTCF	chr5:115608475-115608488	LNCaP	prostate:	n/a	n/a
31	CTCF	chr5:115625040-115625190	AG09309	skin:	n/a	chr5:115625169-115625182
32	CTCF	chr5:115636980-115637130	GM12865	blood:	n/a	chr5:115637008-115637021 chr5:115637005-115637023 chr5:115637007-115637028
33	CTCF	chr5:115608380-115608530	GM12868	blood:	n/a	n/a
34	CTCF	chr5:115624880-115625030	A549	lung:	n/a	n/a
35	CTCF	chr5:115633240-115633390	WERI-Rb-1	eye:	n/a	n/a
36	CTCF	chr5:115636920-115637070	GM12869	blood:	n/a	chr5:115637008-115637021 chr5:115637005-115637023 chr5:115637007-115637028
37	CTCF	chr5:115608411-115608564	GM12878	blood:	n/a	n/a
38	CTCF	chr5:115624962-115625365	H1-hESC	embryonic stem cell:	n/a	chr5:115625169-115625182
39	CTCF	chr5:115608440-115608590	WERI-Rb-1	eye:	n/a	n/a
40	CTCF	chr5:115625175-115625221	GM19238	blood:	n/a	n/a
41	CTCF	chr5:115633240-115633390	HRE	kidney:	n/a	n/a
42	CTCF	chr5:115625111-115625236	Hela-S3	cervix:	n/a	chr5:115625169-115625182
43	CTCF	chr5:115625100-115625250	HCFaa	heart:	n/a	chr5:115625169-115625182
44	CTCF	chr5:115625080-115625230	Hela-S3	cervix:	n/a	chr5:115625169-115625182
45	CTCF	chr5:115625160-115625310	GM06990	blood:	n/a	chr5:115625169-115625182
46	CTCF	chr5:115625140-115625290	HA-sp	spinal cord:	n/a	chr5:115625169-115625182
47	CTCF	chr5:115633260-115633410	WERI-Rb-1	eye:	n/a	n/a
48	CTCF	chr5:115608400-115608550	GM12868	blood:	n/a	n/a
49	CTCF	chr5:115625080-115625230	GM12872	blood:	n/a	chr5:115625169-115625182
50	CTCF	chr5:115625133-115625254	MCF-7	breast:	n/a	chr5:115625169-115625182

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:115639617-115639667	NT2-D1	testis:	n/a
2	chr5:115639617-115639667	NHDF-neo	bronchial:	n/a
3	chr5:115599680-115599730	HCM	heart:	n/a
4	chr5:115639617-115639667	HCM	heart:	n/a
5	chr5:115639617-115639667	HMEC	breast:	n/a
6	chr5:115599680-115599730	Hela-S3	cervix:	n/a
7	chr5:115639617-115639667	PrEC	prostate:	n/a
8	chr5:115639617-115639667	NH-A	brain:	n/a
9	chr5:115639617-115639667	AG04449	skin:	fetal
10	chr5:115599680-115599730	ProgFib	skin:	n/a
11	chr5:115639617-115639667	GM12892	blood:	n/a
12	chr5:115639617-115639667	T-47D	breast:	n/a
13	chr5:115599680-115599730	GM12892	blood:	n/a
14	chr5:115599680-115599730	HRPEpiC	eye:	n/a
15	chr5:115639617-115639667	BJ	skin:	n/a
16	chr5:115599680-115599730	K562	blood:	n/a
17	chr5:115599680-115599730	U87	brain:	n/a
18	chr5:115639617-115639667	HEK293	kidney:	embryo
19	chr5:115599680-115599730	HPAEpiC	pulmonary alveolar:	n/a
20	chr5:115639617-115639667	K562	blood:	n/a
21	chr5:115599680-115599730	ovcar-3	ovarian:	n/a
22	chr5:115639617-115639667	SK-N-SH	brain:	n/a
23	chr5:115639617-115639667	ProgFib	skin:	n/a
24	chr5:115599680-115599730	T-47D	breast:	n/a
25	chr5:115599680-115599730	MCF10A-Er-Src	breast:	n/a
26	chr5:115599680-115599730	SKMC	muscle:	n/a
27	chr5:115599680-115599730	SK-N-SH_RA	brain:	n/a
28	chr5:115639617-115639667	GM12878	blood:	n/a
29	chr5:115599680-115599730	PrEC	prostate:	n/a
30	chr5:115599680-115599730	AG09319	gingival:	n/a
31	chr5:115599680-115599730	H1-hESC	embryonic stem cell:	embryo
32	chr5:115639617-115639667	Hela-S3	cervix:	n/a
33	chr5:115639617-115639667	AG09309	skin:	n/a
34	chr5:115599680-115599730	A549	lung:	n/a
35	chr5:115599680-115599730	GM19239	blood:	n/a
36	chr5:115599680-115599730	GM12878	blood:	n/a
37	chr5:115639617-115639667	AoSMC	blood vessel:	n/a
38	chr5:115639617-115639667	GM12891	blood:	n/a
39	chr5:115599680-115599730	HEEpiC	esophagus:	n/a
40	chr5:115599680-115599730	SK-N-SH	brain:	n/a
41	chr5:115599680-115599730	HRE	kidney:	n/a
42	chr5:115599680-115599730	NHBE	bronchial:	n/a
43	chr5:115599680-115599730	GM06990	blood:	n/a
44	chr5:115599680-115599730	AoSMC	blood vessel:	n/a
45	chr5:115639617-115639667	SK-N-SH_RA	brain:	n/a
46	chr5:115639617-115639667	HepG2	liver:	n/a
47	chr5:115639617-115639667	HAEpiC	amniotic membrane:	n/a
48	chr5:115639617-115639667	HPAEpiC	pulmonary alveolar:	n/a
49	chr5:115599680-115599730	AG10803	skin:	n/a
50	chr5:115639617-115639667	SK-N-MC	brain:	n/a

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:115632385..115634405-chr5:115635053..115637473,2	K562	blood:
2	chr5:115607181..115609929-chr5:115613382..115615949,2	K562	blood:
3	chr5:115473058..115473763-chr5:115624723..115625238,2	MCF-7	breast:
4	chr5:115632385..115634405-chr5:115635053..115637473,2	K562	blood:
5	chr5:115611187..115613784-chr5:115614610..115617269,2	MCF-7	breast:
6	chr5:115607181..115609929-chr5:115613382..115615949,2	K562	blood:
7	chr5:115473639..115474170-chr5:115607611..115608509,2	MCF-7	breast:
8	chr5:115630950..115633524-chr5:115633964..115636710,2	MCF-7	breast:
9	chr5:115647669..115649812-chr5:115683571..115685304,2	K562	blood:
10	chr20:47537809..47538621-chr5:115628215..115629028,2	MCF-7	breast:
11	chr5:115630950..115633524-chr5:115633964..115636710,2	MCF-7	breast:
12	chr5:115611187..115613784-chr5:115614610..115617269,2	MCF-7	breast:
13	chr5:115573428..115574084-chr5:115607901..115608709,2	MCF-7	breast:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-COMMD10-6	chr5:115667915-115668338	l_3000_chr5:115661715-115668338_thyroid
2	lnc-LVRN.1-4	chr5:115632111-115632653	NONHSAT103359
3	lnc-LVRN.1-4	chr5:115643332-115643482	NONHSAT103359
4	lnc-LVRN.1-4	chr5:115633944-115634089	NONHSAT103359
5	lnc-LVRN.1-4	chr5:115628154-115628257	NONHSAT103358
6	lnc-LVRN.1-4	chr5:115637354-115638100	NONHSAT103359
7	lnc-LVRN.1-4	chr5:115633944-115634089	NONHSAT103358
8	lnc-COMMD10-6	chr5:115661716-115661988	l_3000_chr5:115661715-115668338_thyroid
9	lnc-LVRN.1-4	chr5:115641553-115642622	NONHSAT103359
10	lnc-LVRN.1-4	chr5:115639227-115639380	NONHSAT103358
11	lnc-COMMD10-6	chr5:115667126-115667860	l_3000_chr5:115661715-115668338_thyroid
12	lnc-LVRN.1-4	chr5:115638966-115639380	NONHSAT103359

No data

Variant related genes	Relation type
COMMD10	TF binding region
ENSG00000250015	TF binding region
COMMD10	CpG island
ENSG00000250015	CpG island
ENSG00000124198	chromatin interactions

Extended variants
information (count: 4364 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:4364 , 50 per page) page: 1 2 3 4 5 6 7 ... 88

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1896684	chr5:115584159-115584160	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs148090221	chr5:115584166-115584167	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs570811818	chr5:115584168-115584169	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs77081547	chr5:115584178-115584179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs141081560	chr5:115584187-115584188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs560497221	chr5:115584199-115584200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs146911728	chr5:115584218-115584219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs181769785	chr5:115584221-115584222	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs139226434	chr5:115584230-115584231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs563078228	chr5:115584234-115584235	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs531787215	chr5:115584244-115584245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs368608004	chr5:115584246-115584247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs550668406	chr5:115584260-115584261	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs570404474	chr5:115584277-115584278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs533002321	chr5:115584312-115584313	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs546607324	chr5:115584316-115584317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs143253416	chr5:115584322-115584323	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs528699622	chr5:115584330-115584331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs17413625	chr5:115584359-115584360	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs189311888	chr5:115584390-115584391	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs181345043	chr5:115584442-115584443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs553251746	chr5:115584492-115584493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs574735318	chr5:115584503-115584504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs578031378	chr5:115584505-115584506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs542024867	chr5:115584506-115584507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs540272065	chr5:115584535-115584536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs146956227	chr5:115584536-115584537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs557479211	chr5:115584578-115584579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs542938119	chr5:115584606-115584607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs563008094	chr5:115584616-115584617	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs531943944	chr5:115584632-115584633	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs77628157	chr5:115584644-115584645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs535124499	chr5:115584655-115584656	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs17139276	chr5:115584687-115584688	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
35	rs547489981	chr5:115584726-115584727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs186663294	chr5:115584768-115584769	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs137962374	chr5:115584855-115584856	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs528859269	chr5:115584862-115584863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs549268114	chr5:115584935-115584936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs569011696	chr5:115584972-115584973	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs76119905	chr5:115585004-115585005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs143857776	chr5:115585051-115585052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs191105934	chr5:115585129-115585130	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs571440761	chr5:115585142-115585143	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs534010319	chr5:115585149-115585150	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs553823009	chr5:115585183-115585184	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs573714655	chr5:115585204-115585205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs542616234	chr5:115585212-115585213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs183857601	chr5:115585269-115585270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs185692372	chr5:115585279-115585280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
Colorectal cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Ovarian cancer	21720365	CNVD
Salivary gland tumor	18059337	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	19377443	CNVD
Prostate cancer	16461572	CNVD
Myelofibrosis	22110671	CNVD
Sezary syndrome	18413736	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Glaucoma	21310917	CNVD
Glioblastoma multiforme	22286061	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Prostate cancer	22341455	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1372 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115560400-115610600	Weak transcription	Left Ventricle	heart
2	chr5:115561800-115586400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr5:115562400-115589000	Weak transcription	Ovary	ovary
4	chr5:115578800-115586000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr5:115579600-115610600	Weak transcription	Primary B cells from cord blood	blood
6	chr5:115581400-115591600	Weak transcription	Primary T cells from cord blood	blood
7	chr5:115582600-115594600	Weak transcription	Fetal Intestine Large	intestine
8	chr5:115583600-115589000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr5:115583800-115586200	Weak transcription	Brain Hippocampus Middle	brain
10	chr5:115584200-115586200	Weak transcription	Duodenum Smooth Muscle	Duodenum
11	chr5:115584800-115603600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr5:115585200-115587800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr5:115585600-115586400	Weak transcription	Dnd41	blood
14	chr5:115585800-115586000	Weak transcription	Primary hematopoietic stem cells	blood
15	chr5:115585800-115601200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr5:115586000-115587000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr5:115586200-115586600	Strong transcription	Duodenum Smooth Muscle	Duodenum
18	chr5:115586200-115586800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
19	chr5:115586200-115586800	Strong transcription	Brain Hippocampus Middle	brain
20	chr5:115586400-115586600	Enhancers	Aorta	Aorta
21	chr5:115586400-115586600	ZNF genes & repeats	Dnd41	blood
22	chr5:115586400-115586800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
23	chr5:115586600-115586800	ZNF genes & repeats	Adipose Nuclei	Adipose
24	chr5:115586600-115586800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
25	chr5:115586600-115586800	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
26	chr5:115586600-115595600	Weak transcription	Aorta	Aorta
27	chr5:115586600-115603000	Weak transcription	Dnd41	blood
28	chr5:115586800-115587200	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr5:115586800-115588400	Weak transcription	Brain Hippocampus Middle	brain
30	chr5:115586800-115597000	Weak transcription	Monocytes-CD14+_RO01746	blood
31	chr5:115586800-115608000	Weak transcription	Adipose Nuclei	Adipose
32	chr5:115586800-115609800	Weak transcription	Duodenum Smooth Muscle	Duodenum
33	chr5:115586800-115610800	Weak transcription	Primary hematopoietic stem cells	blood
34	chr5:115587000-115599800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr5:115590800-115610200	Weak transcription	Primary B cells from peripheral blood	blood
36	chr5:115591000-115607200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
37	chr5:115591600-115592000	ZNF genes & repeats	Primary T cells from cord blood	blood
38	chr5:115592000-115599600	Weak transcription	Primary T cells from cord blood	blood
39	chr5:115592000-115607800	Weak transcription	Primary T helper cells fromperipheralblood	blood
40	chr5:115592200-115593400	Weak transcription	Sigmoid Colon	Sigmoid Colon
41	chr5:115592800-115593200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr5:115593000-115601400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr5:115594400-115595400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr5:115595000-115601200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr5:115595200-115595400	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr5:115595200-115597800	Enhancers	iPS-15b Cell Line	embryonic stem cell
47	chr5:115595400-115597000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr5:115595600-115596600	Weak transcription	HUES48 Cell Line	embryonic stem cell
49	chr5:115595800-115603800	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr5:115596200-115596400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links