Variant report

Variant	nsv882778
Chromosome Location	chr5:118972113-119384039
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:119079791-119079975	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:119079705-119079979	K562	blood:	n/a	n/a
3	ATF1	chr5:119160125-119160178	K562	blood:	n/a	n/a
4	ATF1	chr5:119198294-119198382	K562	blood:	n/a	n/a
5	ATF1	chr5:119318458-119318658	K562	blood:	n/a	n/a
6	ATF2	chr5:119285237-119285699	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr5:119318639-119318660	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr5:119370023-119370074	K562	blood:	n/a	n/a
9	BACH1	chr5:119309649-119309722	H1-hESC	embryonic stem cell:	n/a	n/a
10	BATF	chr5:119030048-119030274	GM12878	blood:	n/a	n/a
11	BRCA1	chr5:119214598-119214714	H1-hESC	embryonic stem cell:	n/a	n/a
12	BRCA1	chr5:118990797-118991092	Hela-S3	cervix:	n/a	n/a
13	CBX3	chr5:119322801-119323073	K562	blood:	n/a	n/a
14	CBX3	chr5:119002274-119002565	HCT-116	colon:	n/a	n/a
15	CBX3	chr5:119002384-119002525	K562	blood:	n/a	n/a
16	CBX3	chr5:119143704-119143991	HCT-116	colon:	n/a	n/a
17	CBX3	chr5:119087374-119087627	K562	blood:	n/a	n/a
18	CEBPB	chr5:119349445-119349631	A549	lung:	n/a	chr5:119349538-119349549
19	CEBPB	chr5:119214051-119214374	HepG2	liver:	n/a	chr5:119214213-119214224 chr5:119214214-119214225 chr5:119214215-119214224
20	CEBPB	chr5:119362301-119362507	HepG2	liver:	n/a	chr5:119362445-119362456
21	CEBPB	chr5:118989143-118989187	HepG2	liver:	n/a	n/a
22	CEBPB	chr5:118990732-118991111	MCF-7	breast:	n/a	chr5:118990978-118990989 chr5:118990977-118990988 chr5:118990885-118990898 chr5:118990887-118990898 chr5:118990887-118990898 chr5:118990885-118990898
23	CEBPB	chr5:119215032-119215280	A549	lung:	n/a	chr5:119215088-119215101 chr5:119215157-119215168 chr5:119215072-119215084
24	CEBPB	chr5:119142705-119142731	K562	blood:	n/a	n/a
25	CEBPB	chr5:119144267-119144596	MCF-7	breast:	n/a	chr5:119144382-119144393
26	CEBPB	chr5:118990789-118991120	ECC-1	luminal epithelium:	n/a	chr5:118990978-118990989 chr5:118990977-118990988 chr5:118990885-118990898 chr5:118990887-118990898 chr5:118990887-118990898 chr5:118990885-118990898
27	CEBPB	chr5:119215020-119215249	HepG2	liver:	n/a	chr5:119215088-119215101 chr5:119215157-119215168 chr5:119215072-119215084
28	CEBPB	chr5:119215053-119215323	IMR90	lung:	n/a	chr5:119215088-119215101 chr5:119215157-119215168 chr5:119215072-119215084
29	CEBPB	chr5:119365740-119365898	HepG2	liver:	n/a	chr5:119365815-119365826
30	CEBPB	chr5:118990724-118991187	MCF-7	breast:	n/a	chr5:118990978-118990989 chr5:118990977-118990988 chr5:118990885-118990898 chr5:118990887-118990898 chr5:118990887-118990898 chr5:118990885-118990898
31	CEBPB	chr5:119310790-119310988	HepG2	liver:	n/a	chr5:119310865-119310876 chr5:119310866-119310877 chr5:119310865-119310878
32	CEBPB	chr5:119332629-119332915	HepG2	liver:	n/a	chr5:119332786-119332797
33	CEBPB	chr5:119178550-119178586	K562	blood:	n/a	n/a
34	CEBPB	chr5:119362353-119362517	A549	lung:	n/a	chr5:119362445-119362456
35	CEBPB	chr5:119144236-119144576	HepG2	liver:	n/a	chr5:119144382-119144393
36	CEBPB	chr5:119144182-119144584	H1-hESC	embryonic stem cell:	n/a	chr5:119144382-119144393
37	CEBPB	chr5:119079719-119080035	Hela-S3	cervix:	n/a	chr5:119079882-119079895
38	CEBPB	chr5:118990553-118991201	Hela-S3	cervix:	n/a	chr5:118990978-118990989 chr5:118990977-118990988 chr5:118990885-118990898 chr5:118990887-118990898 chr5:118990887-118990898 chr5:118990885-118990898
39	CEBPB	chr5:119175880-119176212	HepG2	liver:	n/a	n/a
40	CEBPB	chr5:119332694-119332926	H1-hESC	embryonic stem cell:	n/a	chr5:119332786-119332797
41	CEBPB	chr5:119238466-119238643	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr5:118995799-118996049	HepG2	liver:	n/a	chr5:118995912-118995923
43	CEBPB	chr5:119349452-119349651	HepG2	liver:	n/a	chr5:119349538-119349549
44	CEBPB	chr5:119144254-119144573	A549	lung:	n/a	chr5:119144382-119144393
45	CEBPB	chr5:119225844-119226130	IMR90	lung:	n/a	n/a
46	CEBPB	chr5:119349464-119349621	IMR90	lung:	n/a	chr5:119349538-119349549
47	CEBPB	chr5:119214054-119214812	MCF-7	breast:	n/a	chr5:119214213-119214224 chr5:119214214-119214225 chr5:119214215-119214224
48	CEBPB	chr5:119155285-119155582	HepG2	liver:	n/a	chr5:119155418-119155429
49	CEBPB	chr5:118990794-118991176	A549	lung:	n/a	chr5:118990978-118990989 chr5:118990977-118990988 chr5:118990885-118990898 chr5:118990887-118990898 chr5:118990887-118990898 chr5:118990885-118990898
50	CEBPB	chr5:119165034-119165231	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:119285514-119285564	BE2_C	brain:	n/a
2	chr5:119285772-119285822	HUVEC	blood vessel:	n/a
3	chr5:119214672-119214722	HepG2	liver:	n/a
4	chr5:119116179-119116229	PFSK-1	brain:	n/a
5	chr5:119116329-119116379	SK-N-MC	brain:	n/a
6	chr5:119116329-119116379	PrEC	prostate:	n/a
7	chr5:119214672-119214722	HRE	kidney:	n/a
8	chr5:119116329-119116379	HRPEpiC	eye:	n/a
9	chr5:119116329-119116379	T-47D	breast:	n/a
10	chr5:119285514-119285564	HRE	kidney:	n/a
11	chr5:119116179-119116229	AG09319	gingival:	n/a
12	chr5:119285772-119285822	HepG2	liver:	n/a
13	chr5:119285514-119285564	ProgFib	skin:	n/a
14	chr5:119214672-119214722	HCT-116	colon:	n/a
15	chr5:119285514-119285564	HEK293	kidney:	embryo
16	chr5:119285772-119285822	BE2_C	brain:	n/a
17	chr5:119116329-119116379	SKMC	muscle:	n/a
18	chr5:119116329-119116379	HNPCEpiC	eye:	n/a
19	chr5:119285772-119285822	AG09309	skin:	n/a
20	chr5:119116179-119116229	HCT-116	colon:	n/a
21	chr5:119116179-119116229	RPTEC	kidney:	n/a
22	chr5:119116329-119116379	H1-hESC	embryonic stem cell:	embryo
23	chr5:119285772-119285822	AG10803	skin:	n/a
24	chr5:119285514-119285564	Hepatocyte	liver:	n/a
25	chr5:119116179-119116229	Caco-2	colon:	n/a
26	chr5:119285772-119285822	SAEC	small airway:	n/a
27	chr5:119116329-119116379	MCF10A-Er-Src	breast:	n/a
28	chr5:119285772-119285822	GM19239	blood:	n/a
29	chr5:119285772-119285822	NHBE	bronchial:	n/a
30	chr5:119116179-119116229	SK-N-SH	brain:	n/a
31	chr5:119214672-119214722	SK-N-MC	brain:	n/a
32	chr5:119214672-119214722	Hela-S3	cervix:	n/a
33	chr5:119116329-119116379	ovcar-3	ovarian:	n/a
34	chr5:119116329-119116379	HUVEC	blood vessel:	n/a
35	chr5:119285772-119285822	GM12891	blood:	n/a
36	chr5:119285772-119285822	HMEC	breast:	n/a
37	chr5:119116179-119116229	NH-A	brain:	n/a
38	chr5:119285514-119285564	Hela-S3	cervix:	n/a
39	chr5:119285514-119285564	NB4	blood:	n/a
40	chr5:119116179-119116229	HRCEpiC	kidney:	n/a
41	chr5:119285514-119285564	PFSK-1	brain:	n/a
42	chr5:119214672-119214722	AoSMC	blood vessel:	n/a
43	chr5:119285514-119285564	HL-60	blood:	n/a
44	chr5:119116179-119116229	U87	brain:	n/a
45	chr5:119116329-119116379	NB4	blood:	n/a
46	chr5:119116329-119116379	HPAEpiC	pulmonary alveolar:	n/a
47	chr5:119285514-119285564	HCT-116	colon:	n/a
48	chr5:119116329-119116379	NH-A	brain:	n/a
49	chr5:119116179-119116229	MCF10A-Er-Src	breast:	n/a
50	chr5:119285772-119285822	HIPEpiC	eye:	n/a

No.	Distal block	Cell Line	Cell type
1	chr2:185990403..185991343-chr5:119236365..119236898,2	MCF-7	breast:
2	chr5:119339357..119341886-chr5:119342360..119344963,3	MCF-7	breast:
3	chr5:119315165..119317093-chr5:119319183..119320996,2	K562	blood:
4	chr5:118969123..118972666-chr5:118973811..118977554,4	K562	blood:
5	chr5:119126307..119128529-chr5:119131393..119133622,2	K562	blood:
6	chr5:119278671..119279490-chr5:119662851..119663369,2	MCF-7	breast:
7	chr3:62651556..62652452-chr5:119117724..119118513,2	MCF-7	breast:
8	chr5:118987303..118989018-chr5:118989601..118992459,2	K562	blood:
9	chr5:119322458..119322958-chr8:143315608..143316280,2	MCF-7	breast:
10	chr5:119093091..119095460-chr5:119099041..119101933,3	K562	blood:
11	chr5:119082500..119084067-chr5:119086307..119088713,2	K562	blood:
12	chr5:118914344..118915154-chr5:119079337..119079948,2	MCF-7	breast:
13	chr5:119164632..119167610-chr5:119169967..119171530,2	K562	blood:
14	chr5:118991005..118992570-chr5:118993778..118996554,2	K562	blood:
15	chr3:99997776..99998276-chr5:119383981..119384507,2	MCF-7	breast:
16	chr5:119339357..119341886-chr5:119342360..119344963,3	MCF-7	breast:
17	chr5:118969350..118971172-chr5:118976054..118978224,2	K562	blood:
18	chr5:119042499..119044624-chr5:119047745..119049345,2	K562	blood:
19	chr5:118969123..118972666-chr5:118973811..118977554,4	K562	blood:
20	chr5:118991005..118992570-chr5:118993778..118996554,2	K562	blood:
21	chr5:118806209..118806753-chr5:119079435..119080027,2	K562	blood:
22	chr5:118894367..118897199-chr5:119080311..119081964,2	K562	blood:
23	chr5:119311184..119313460-chr5:119315140..119318048,2	K562	blood:
24	chr5:119315165..119317093-chr5:119319183..119320996,2	K562	blood:
25	chr5:119164632..119167610-chr5:119169967..119171530,2	K562	blood:
26	chr5:118806633..118808561-chr5:119073564..119075972,2	MCF-7	breast:
27	chr5:119007680..119010019-chr5:119012077..119014040,2	K562	blood:
28	chr5:118973233..118975098-chr5:118976996..118979393,2	K562	blood:
29	chr18:65208157..65208941-chr5:119229771..119230382,2	MCF-7	breast:
30	chr5:119042499..119044624-chr5:119047745..119049345,2	K562	blood:
31	chr5:118806276..118807504-chr5:119079301..119080297,7	MCF-7	breast:
32	chr5:119126307..119128529-chr5:119131393..119133622,2	K562	blood:
33	chr5:119007680..119010019-chr5:119012077..119014040,2	K562	blood:
34	chr5:118806455..118807257-chr5:119079374..119080361,4	MCF-7	breast:
35	chr5:119278619..119279545-chr5:119793318..119794660,3	MCF-7	breast:
36	chr5:119082500..119084067-chr5:119086307..119088713,2	K562	blood:
37	chr5:119311184..119313460-chr5:119315140..119318048,2	K562	blood:
38	chr5:119093091..119095460-chr5:119099041..119101933,3	K562	blood:
39	chr10:7991136..7992090-chr5:119132393..119133207,2	MCF-7	breast:
40	chr5:118983880..118986442-chr5:118987297..118989127,2	K562	blood:
41	chr5:118973233..118975098-chr5:118976996..118979393,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM170A-2	chr5:119375212-119375297	l_3004_chr5:119198853-119375297_testes
2	lnc-FAM170A-2	chr5:119198854-119198913	l_3004_chr5:119198853-119375297_testes
3	lnc-FAM170A-2	chr5:119341293-119341390	l_3004_chr5:119198853-119375297_testes
4	lnc-FAM170A-2	chr5:119328116-119328211	l_3004_chr5:119198853-119375297_testes

Variant related genes	Relation type
ENSG00000250895	TF binding region
ENSG00000234259	TF binding region
ENSG00000250895	CpG island
ENSG00000234259	CpG island
ENSG00000250895	chromatin interactions

Extended variants
information (count: 7564 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:7564 , 50 per page) page: 1 2 3 4 5 6 7 ... 152

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs553778059	chr5:118975079-118975080	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
2	rs573936502	chr5:118975089-118975090	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs192521346	chr5:118975095-118975096	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
4	rs556354492	chr5:118975108-118975109	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs140915646	chr5:118975118-118975119	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
6	rs545186002	chr5:118975204-118975205	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
7	rs565066295	chr5:118975205-118975206	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
8	rs185747169	chr5:118975245-118975246	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
9	rs369241411	chr5:118975287-118975288	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
10	rs569937197	chr5:118975321-118975322	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
11	rs189026032	chr5:118975330-118975331	Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
12	rs77076644	chr5:118975816-118975817	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs34772863	chr5:118975819-118975820	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs149200436	chr5:118975884-118975885	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs369239913	chr5:118975944-118975945	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs545517683	chr5:118975965-118975966	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs570419626	chr5:118975971-118975972	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs17164610	chr5:118975982-118975983	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs17470076	chr5:118975991-118975992	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs79740029	chr5:118975994-118975995	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs560976749	chr5:118976014-118976015	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs139397541	chr5:118976075-118976076	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs185189623	chr5:118976084-118976085	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs76669642	chr5:118976088-118976089	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs368638586	chr5:118976104-118976105	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs376249532	chr5:118976156-118976157	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs116521754	chr5:118976170-118976171	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs532103767	chr5:118976188-118976189	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs369844156	chr5:118976217-118976218	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs551841491	chr5:118976256-118976257	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs571522484	chr5:118976303-118976304	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs552904906	chr5:118976379-118976380	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs167885	chr5:118976416-118976417	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs548073109	chr5:118976426-118976427	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs551266884	chr5:118976443-118976444	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs373996655	chr5:118976447-118976448	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs567824706	chr5:118976462-118976463	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs564699109	chr5:118976502-118976503	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs79118392	chr5:118976565-118976566	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs549956667	chr5:118976571-118976572	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs147459020	chr5:118976621-118976622	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs539148029	chr5:118976658-118976659	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs568118816	chr5:118976661-118976662	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs370550833	chr5:118976671-118976672	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs188751683	chr5:118976676-118976677	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs572270547	chr5:118976683-118976684	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs113828924	chr5:118976819-118976820	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs2434601	chr5:118976828-118976829	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs574688054	chr5:118976837-118976838	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs199942640	chr5:118976847-118976848	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
Colorectal cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Ovarian cancer	21720365	CNVD
Salivary gland tumor	18059337	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Renal cell carcinoma	19377443	CNVD
Prostate cancer	16461572	CNVD
Myelofibrosis	22110671	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Glaucoma	21310917	CNVD
Glioblastoma multiforme	22286061	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Renal cell carcinoma	18194544	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Chordoma	21215367	CNVD
Recurrent pregnancy loss	19789632	CNVD

Chromatin state (count:351 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:118975000-118975400	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
2	chr5:118975800-118977200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr5:118976000-118976400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr5:118977200-118977800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr5:118979400-118980200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:118979800-118980000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr5:118979800-118980200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr5:118980200-118982400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr5:118982400-118983400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr5:118986600-118987000	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr5:118986600-118987800	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr5:118987000-118988600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
13	chr5:118987800-118989400	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
14	chr5:118988600-118989000	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr5:118989000-118989800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
16	chr5:118989400-118989600	Weak transcription	Primary monocytes fromperipheralblood	blood
17	chr5:118989600-118992000	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr5:118989800-118990000	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr5:118990000-118990200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
20	chr5:118990200-118991200	Enhancers	Monocytes-CD14+_RO01746	blood
21	chr5:118990600-118991200	Enhancers	HMEC	breast
22	chr5:118990600-118991400	Enhancers	Hela-S3	cervix
23	chr5:118996200-118996400	Enhancers	Pancreas	Pancrea
24	chr5:118996400-119000400	Weak transcription	Pancreas	Pancrea
25	chr5:119001800-119002400	ZNF genes & repeats	Liver	Liver
26	chr5:119015800-119016200	Enhancers	Pancreas	Pancrea
27	chr5:119015800-119016400	Enhancers	Fetal Muscle Trunk	muscle
28	chr5:119016200-119016800	ZNF genes & repeats	Pancreas	Pancrea
29	chr5:119016400-119016600	Weak transcription	Fetal Muscle Trunk	muscle
30	chr5:119016600-119017800	Enhancers	Primary monocytes fromperipheralblood	blood
31	chr5:119016800-119017000	Weak transcription	Pancreas	Pancrea
32	chr5:119016800-119017800	Enhancers	Fetal Muscle Leg	muscle
33	chr5:119017000-119017200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr5:119017000-119017200	Enhancers	Fetal Muscle Trunk	muscle
35	chr5:119017000-119017200	Enhancers	Pancreas	Pancrea
36	chr5:119017000-119017800	Enhancers	Monocytes-CD14+_RO01746	blood
37	chr5:119017200-119019400	Weak transcription	Pancreas	Pancrea
38	chr5:119017400-119017800	Enhancers	Primary B cells from peripheral blood	blood
39	chr5:119018200-119019000	Enhancers	iPS-15b Cell Line	embryonic stem cell
40	chr5:119019400-119019600	Enhancers	Pancreas	Pancrea
41	chr5:119025600-119026600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr5:119026000-119026400	Active TSS	H9 Cell Line	embryonic stem cell
43	chr5:119026000-119026400	Active TSS	HUES6 Cell Line	embryonic stem cell
44	chr5:119026400-119027600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
45	chr5:119026600-119027400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
46	chr5:119041200-119041400	Enhancers	Rectal Mucosa Donor 31	rectum
47	chr5:119041200-119041600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr5:119041400-119041800	Enhancers	Colonic Mucosa	Colon
49	chr5:119041400-119041800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
50	chr5:119041600-119042200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links