No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs9258206 |
chr6:29704237-29704238 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs2743919 |
chr6:29704259-29704260 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
3 |
rs1736915 |
chr6:29704316-29704317 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs1736914 |
chr6:29704379-29704380 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
5 |
rs539397067 |
chr6:29704380-29704381 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs182116036 |
chr6:29704397-29704398 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs1736913 |
chr6:29704400-29704401 |
Weak transcription Strong transcription Enhancers
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
8 |
rs9258207 |
chr6:29704443-29704444 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
9 |
rs549814990 |
chr6:29704537-29704538 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs9258208 |
chr6:29704545-29704546 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
mRNA abundance
|
11 |
rs555127945 |
chr6:29704546-29704547 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs2517944 |
chr6:29704547-29704548 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
mRNA abundance
|
13 |
rs116878102 |
chr6:29704556-29704557 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs186086337 |
chr6:29704559-29704560 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs9500967 |
chr6:29704560-29704561 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs532675656 |
chr6:29704562-29704563 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs1633099 |
chr6:29704633-29704634 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
18 |
rs9368609 |
chr6:29704638-29704639 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
19 |
rs2523394 |
chr6:29704673-29704674 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
20 |
rs548429368 |
chr6:29704675-29704676 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs568559830 |
chr6:29704709-29704710 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs552189983 |
chr6:29704726-29704727 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs9500968 |
chr6:29704772-29704773 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs2517943 |
chr6:29704833-29704834 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
25 |
rs115479327 |
chr6:29704834-29704835 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs149129401 |
chr6:29704895-29704896 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs115042142 |
chr6:29704897-29704898 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs2743918 |
chr6:29704921-29704922 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
29 |
rs190406637 |
chr6:29704949-29704950 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs148371416 |
chr6:29704978-29704979 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs114549249 |
chr6:29704988-29704989 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs376989934 |
chr6:29704996-29704997 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs113724594 |
chr6:29705009-29705010 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs563042573 |
chr6:29705015-29705016 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs535446619 |
chr6:29705025-29705026 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs1633098 |
chr6:29705028-29705029 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
37 |
rs572109389 |
chr6:29705030-29705031 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs540432808 |
chr6:29705031-29705032 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs552920167 |
chr6:29705072-29705073 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs7751815 |
chr6:29705084-29705085 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs577118356 |
chr6:29705108-29705109 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
42 |
rs182531190 |
chr6:29705128-29705129 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs115130761 |
chr6:29705169-29705170 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs144026054 |
chr6:29705199-29705200 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs2844832 |
chr6:29705219-29705220 |
Weak transcription Strong transcription
|
lncRNA
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
46 |
rs186813240 |
chr6:29705294-29705295 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs527823225 |
chr6:29705299-29705300 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs547608967 |
chr6:29705350-29705351 |
Weak transcription Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs9258209 |
chr6:29705402-29705403 |
Weak transcription Strong transcription Genic enhancers Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
50 |
rs2743917 |
chr6:29705405-29705406 |
Weak transcription Strong transcription Genic enhancers Enhancers
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|