Variant report

Variant	nsv883963
Chromosome Location	chr6:29914270-29923128
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:200)
CpG islands
(count:244)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:200 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:29922852-29922901	K562	blood:	n/a	n/a
2	ATF2	chr6:29914800-29915500	GM12878	blood:	n/a	n/a
3	BCL3	chr6:29914873-29915463	GM12878	blood:	n/a	n/a
4	BCLAF1	chr6:29914592-29915546	GM12878	blood:	n/a	n/a
5	BCLAF1	chr6:29916040-29916482	GM12878	blood:	n/a	n/a
6	BCLAF1	chr6:29914573-29915557	GM12878	blood:	n/a	n/a
7	BHLHE40	chr6:29920783-29921023	A549	lung:	n/a	n/a
8	BHLHE40	chr6:29920974-29921274	K562	blood:	n/a	n/a
9	BHLHE40	chr6:29915021-29915352	GM12878	blood:	n/a	n/a
10	CBX3	chr6:29920575-29921454	HCT-116	colon:	n/a	n/a
11	CEBPB	chr6:29919167-29919420	K562	blood:	n/a	n/a
12	CHD2	chr6:29914301-29914707	GM12878	blood:	n/a	n/a
13	CHD2	chr6:29915994-29916686	GM12878	blood:	n/a	n/a
14	CHD2	chr6:29915121-29915474	GM12878	blood:	n/a	n/a
15	CTCF	chr6:29917974-29918105	K562	blood:	n/a	n/a
16	CTCF	chr6:29917940-29918090	K562	blood:	n/a	n/a
17	CUX1	chr6:29914956-29915089	GM12878	blood:	n/a	n/a
18	ELF1	chr6:29915020-29915453	GM12878	blood:	n/a	n/a
19	EP300	chr6:29920738-29921236	A549	lung:	n/a	n/a
20	EP300	chr6:29920634-29921267	A549	lung:	n/a	n/a
21	EP300	chr6:29920979-29921212	SK-N-SH_RA	brain:	n/a	n/a
22	FOS	chr6:29920677-29921326	MCF10A-Er-Src	breast:	n/a	n/a
23	FOS	chr6:29920699-29921264	MCF10A-Er-Src	breast:	n/a	n/a
24	FOS	chr6:29920684-29921270	MCF10A-Er-Src	breast:	n/a	n/a
25	FOS	chr6:29920685-29921275	MCF10A-Er-Src	breast:	n/a	n/a
26	FOS	chr6:29920665-29921284	HUVEC	blood vessel:	n/a	n/a
27	FOSL1	chr6:29920598-29921295	HCT-116	colon:	n/a	n/a
28	FOSL1	chr6:29920649-29921461	HCT-116	colon:	n/a	n/a
29	FOSL2	chr6:29920553-29921362	A549	lung:	n/a	n/a
30	FOSL2	chr6:29920758-29921244	A549	lung:	n/a	n/a
31	FOSL2	chr6:29920563-29921346	SK-N-SH	brain:	n/a	n/a
32	GATA3	chr6:29920615-29921377	A549	lung:	n/a	n/a
33	GATA3	chr6:29918761-29919040	SH-SY5Y	brain:	n/a	n/a
34	JUN	chr6:29920751-29921344	HUVEC	blood vessel:	n/a	n/a
35	JUND	chr6:29920645-29921459	HCT-116	colon:	n/a	n/a
36	JUND	chr6:29920600-29921304	SK-N-SH	brain:	n/a	n/a
37	JUND	chr6:29920569-29921371	HCT-116	colon:	n/a	n/a
38	JUND	chr6:29921013-29921312	K562	blood:	n/a	n/a
39	MAX	chr6:29914766-29914807	GM12878	blood:	n/a	n/a
40	MAX	chr6:29920664-29921185	A549	lung:	n/a	n/a
41	MAX	chr6:29920664-29921326	A549	lung:	n/a	n/a
42	MEF2A	chr6:29920703-29921365	SK-N-SH	brain:	n/a	n/a
43	MTA3	chr6:29913554-29917310	GM12878	blood:	n/a	n/a
44	MTA3	chr6:29917718-29918201	GM12878	blood:	n/a	n/a
45	MTA3	chr6:29914361-29915519	GM12878	blood:	n/a	n/a
46	MXI1	chr6:29914719-29914735	GM12878	blood:	n/a	n/a
47	MYC	chr6:29920694-29921154	MCF10A-Er-Src	breast:	n/a	n/a
48	MYC	chr6:29920684-29921247	MCF10A-Er-Src	breast:	n/a	n/a
49	MYC	chr6:29916885-29916943	H1-hESC	embryonic stem cell:	n/a	n/a
50	NFATC1	chr6:29914067-29917278	GM12878	blood:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:29921779-29921829	NHBE	bronchial:	n/a
2	chr6:29914938-29914988	AG09309	skin:	n/a
3	chr6:29921779-29921829	CMK	blood:	n/a
4	chr6:29914938-29914988	HL-60	blood:	n/a
5	chr6:29914938-29914988	SK-N-SH	brain:	n/a
6	chr6:29921779-29921829	HCPEpiC	choroid plexus:	n/a
7	chr6:29921779-29921829	A549	lung:	n/a
8	chr6:29921779-29921829	PFSK-1	brain:	n/a
9	chr6:29920309-29920359	A549	lung:	n/a
10	chr6:29920309-29920359	HRPEpiC	eye:	n/a
11	chr6:29920309-29920359	HCF	heart:	n/a
12	chr6:29920309-29920359	HEEpiC	esophagus:	n/a
13	chr6:29922522-29922572	ECC-1	luminal epithelium:	n/a
14	chr6:29922522-29922572	SK-N-SH_RA	brain:	n/a
15	chr6:29921779-29921829	HCF	heart:	n/a
16	chr6:29914938-29914988	HCT-116	colon:	n/a
17	chr6:29922522-29922572	NT2-D1	testis:	n/a
18	chr6:29922522-29922572	K562	blood:	n/a
19	chr6:29920309-29920359	PFSK-1	brain:	n/a
20	chr6:29922522-29922572	HRPEpiC	eye:	n/a
21	chr6:29914938-29914988	ProgFib	skin:	n/a
22	chr6:29921779-29921829	T-47D	breast:	n/a
23	chr6:29920309-29920359	HCT-116	colon:	n/a
24	chr6:29922522-29922572	AG09309	skin:	n/a
25	chr6:29914938-29914988	HMEC	breast:	n/a
26	chr6:29921779-29921829	PrEC	prostate:	n/a
27	chr6:29920309-29920359	HAEpiC	amniotic membrane:	n/a
28	chr6:29914938-29914988	K562	blood:	n/a
29	chr6:29922522-29922572	SKMC	muscle:	n/a
30	chr6:29922522-29922572	SAEC	small airway:	n/a
31	chr6:29914938-29914988	GM12892	blood:	n/a
32	chr6:29922522-29922572	GM12892	blood:	n/a
33	chr6:29914938-29914988	Caco-2	colon:	n/a
34	chr6:29922522-29922572	Caco-2	colon:	n/a
35	chr6:29921779-29921829	AG09309	skin:	n/a
36	chr6:29921779-29921829	LNCaP	prostate:	n/a
37	chr6:29922522-29922572	NHDF-neo	bronchial:	n/a
38	chr6:29914938-29914988	HEK293	kidney:	embryo
39	chr6:29920309-29920359	IMR90	lung:	fetal
40	chr6:29922522-29922572	HCF	heart:	n/a
41	chr6:29921779-29921829	SKMC	muscle:	n/a
42	chr6:29921779-29921829	H1-hESC	embryonic stem cell:	embryo
43	chr6:29914938-29914988	HRCEpiC	kidney:	n/a
44	chr6:29920309-29920359	K562	blood:	n/a
45	chr6:29914938-29914988	Hela-S3	cervix:	n/a
46	chr6:29922522-29922572	NH-A	brain:	n/a
47	chr6:29922522-29922572	CMK	blood:	n/a
48	chr6:29921779-29921829	HRCEpiC	kidney:	n/a
49	chr6:29920309-29920359	Hela-S3	cervix:	n/a
50	chr6:29914938-29914988	AG10803	skin:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:29917977..29920432-chr6:29924161..29926474,2	K562	blood:
2	chr6:29917426..29919477-chr6:29924161..29925991,2	K562	blood:
3	chr6:29764926..29767618-chr6:29920990..29923179,3	MCF-7	breast:
4	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:
5	chr6:29909870..29912784-chr6:29914733..29916600,2	MCF-7	breast:
6	chr6:29921960..29924230-chr6:29934596..29936833,2	K562	blood:
7	chr6:29860588..29861572-chr6:29915904..29916650,2	HCT-116	colon:
8	chr6:29920527..29922060-chr6:29926055..29928693,2	K562	blood:
9	chr6:29820057..29821697-chr6:29920603..29922626,2	K562	blood:
10	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:
11	chr6:29920547..29922811-chr6:29925895..29928597,2	MCF-7	breast:
12	chr6:29917413..29919975-chr6:29932108..29934788,2	K562	blood:

No data

Variant related genes	Relation type
HCG4P5	TF binding region
HLA-W	TF binding region
HCG4P5	CpG island
HLA-W	CpG island
ENSG00000206503	chromatin interactions
ENSG00000227766	chromatin interactions
ENSG00000235290	chromatin interactions
ENSG00000233265	chromatin interactions

Extended variants
information (count: 908 )
Associated
traits (count: 113 )

Variant overlapped rSNPs/rCNVs (count:908 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1616549	chr6:29914270-29914271	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs9260226	chr6:29914300-29914301	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs558162753	chr6:29914301-29914302	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs2916804	chr6:29914304-29914305	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
5	rs537817343	chr6:29914314-29914315	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs2571383	chr6:29914315-29914316	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs200071453	chr6:29914338-29914339	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs116561874	chr6:29914349-29914350	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs191772082	chr6:29914367-29914368	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs376646	chr6:29914377-29914378	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs202014028	chr6:29914381-29914382	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs149901304	chr6:29914392-29914393	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs569945716	chr6:29914396-29914397	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs565550312	chr6:29914398-29914399	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs2975047	chr6:29914399-29914400	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs374031825	chr6:29914402-29914403	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs3016022	chr6:29914412-29914413	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
18	rs371931519	chr6:29914418-29914419	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs554200868	chr6:29914425-29914426	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs140929644	chr6:29914433-29914434	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs183617482	chr6:29914443-29914444	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs199905336	chr6:29914457-29914458	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs17179508	chr6:29914478-29914479	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs546429229	chr6:29914498-29914499	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs396379	chr6:29914500-29914501	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs398288	chr6:29914507-29914508	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs188019347	chr6:29914510-29914511	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs569095126	chr6:29914520-29914521	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs537448675	chr6:29914521-29914522	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs376253	chr6:29914533-29914534	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs17185910	chr6:29914544-29914545	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs17185915	chr6:29914546-29914547	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs2248151	chr6:29914548-29914549	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs17179529	chr6:29914553-29914554	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs369455875	chr6:29914554-29914555	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs545584997	chr6:29914571-29914572	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs140400921	chr6:29914595-29914596	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs2248153	chr6:29914615-29914616	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs143617667	chr6:29914629-29914630	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs561324928	chr6:29914639-29914640	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs529861370	chr6:29914672-29914673	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs6901707	chr6:29914686-29914687	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs2571384	chr6:29914696-29914697	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	mRNA abundance
44	rs9260229	chr6:29914698-29914699	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	mRNA abundance
45	rs1961135	chr6:29914706-29914707	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	mRNA abundance
46	rs569105764	chr6:29914709-29914710	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs191490506	chr6:29914724-29914725	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs376892234	chr6:29914741-29914742	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs2571385	chr6:29914767-29914768	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs17179557	chr6:29914768-29914769	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:113)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	21509527	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD

Chromatin state (count:289 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29910200-29914800	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
2	chr6:29910400-29914600	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
3	chr6:29910600-29915400	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
4	chr6:29911000-29914600	Transcr. at gene 5' and 3'	Primary T helper memory cells from peripheral blood 1	blood
5	chr6:29911000-29915800	Weak transcription	Aorta	Aorta
6	chr6:29911200-29914600	Transcr. at gene 5' and 3'	Primary T helper memory cells from peripheral blood 2	blood
7	chr6:29911200-29920200	Weak transcription	A549	lung
8	chr6:29911200-29921400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:29911400-29914400	Transcr. at gene 5' and 3'	Primary T cells from cord blood	blood
10	chr6:29911400-29915000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr6:29911600-29914600	Weak transcription	Fetal Brain Female	brain
12	chr6:29911600-29914600	Weak transcription	HSMMtube	muscle
13	chr6:29911600-29915000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:29911600-29915200	Weak transcription	HUVEC	blood vessel
15	chr6:29911600-29916200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr6:29911600-29920400	Weak transcription	Fetal Brain Male	brain
17	chr6:29911800-29914600	Weak transcription	Brain Cingulate Gyrus	brain
18	chr6:29911800-29914800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr6:29911800-29916200	Genic enhancers	Left Ventricle	heart
20	chr6:29911800-29916800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr6:29911800-29917200	Strong transcription	Fetal Stomach	stomach
22	chr6:29911800-29917600	Strong transcription	Fetal Intestine Large	intestine
23	chr6:29912200-29916800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr6:29912400-29917200	Genic enhancers	Spleen	Spleen
25	chr6:29912400-29918000	Strong transcription	Fetal Intestine Small	intestine
26	chr6:29912600-29914400	Weak transcription	Brain Hippocampus Middle	brain
27	chr6:29912600-29914400	Strong transcription	HSMM	muscle
28	chr6:29912600-29915800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr6:29912600-29916200	Weak transcription	Pancreas	Pancrea
30	chr6:29912600-29921000	Weak transcription	Psoas Muscle	Psoas
31	chr6:29912800-29914400	Strong transcription	Dnd41	blood
32	chr6:29912800-29915000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr6:29912800-29915200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:29912800-29916800	Strong transcription	Sigmoid Colon	Sigmoid Colon
35	chr6:29912800-29924200	Weak transcription	Right Atrium	heart
36	chr6:29913000-29917200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr6:29913000-29924000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
38	chr6:29913000-29924200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr6:29913200-29914400	Genic enhancers	Right Ventricle	heart
40	chr6:29913200-29914600	Strong transcription	Osteobl	bone
41	chr6:29913200-29914800	Strong transcription	Rectal Smooth Muscle	rectum
42	chr6:29913200-29915000	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr6:29913200-29917000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
44	chr6:29913200-29917000	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr6:29913400-29914400	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
46	chr6:29913400-29915000	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
47	chr6:29913400-29915200	Genic enhancers	Primary neutrophils fromperipheralblood	blood
48	chr6:29913400-29915200	Weak transcription	Gastric	stomach
49	chr6:29913400-29915400	Strong transcription	Fetal Thymus	thymus
50	chr6:29913400-29915600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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