Variant report

Variant	nsv884442
Chromosome Location	chr6:31745518-31764899
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1436)
CpG islands
(count:6235)
Chromatin interactive
region (count:67)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1436 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:31759119-31759394	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:31763502-31763947	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:31759069-31759416	K562	blood:	n/a	n/a
4	ARID3A	chr6:31763554-31764074	K562	blood:	n/a	n/a
5	ARID3A	chr6:31761944-31762639	K562	blood:	n/a	n/a
6	ATF2	chr6:31757039-31757512	GM12878	blood:	n/a	n/a
7	ATF2	chr6:31763566-31764057	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF2	chr6:31763619-31764006	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF3	chr6:31744570-31745542	K562	blood:	n/a	n/a
10	ATF3	chr6:31763328-31763991	K562	blood:	n/a	chr6:31763644-31763653
11	ATF3	chr6:31763531-31763886	A549	lung:	n/a	chr6:31763644-31763653
12	ATF3	chr6:31763079-31763875	K562	blood:	n/a	chr6:31763644-31763653
13	BACH1	chr6:31748097-31748139	K562	blood:	n/a	n/a
14	BACH1	chr6:31763634-31763834	K562	blood:	n/a	n/a
15	BACH1	chr6:31762945-31763355	K562	blood:	n/a	n/a
16	BATF	chr6:31757156-31757438	GM12878	blood:	n/a	n/a
17	BATF	chr6:31763618-31763815	GM12878	blood:	n/a	n/a
18	BATF	chr6:31757142-31757413	GM12878	blood:	n/a	n/a
19	BCL11A	chr6:31757133-31757472	GM12878	blood:	n/a	n/a
20	BCL11A	chr6:31757072-31757527	GM12878	blood:	n/a	n/a
21	BCL3	chr6:31762535-31764219	K562	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
22	BCL3	chr6:31763260-31763930	GM12878	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
23	BCL3	chr6:31763225-31763562	A549	lung:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763526-31763539
24	BCLAF1	chr6:31744624-31745537	K562	blood:	n/a	n/a
25	BCLAF1	chr6:31763029-31764091	K562	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
26	BCLAF1	chr6:31762987-31764044	GM12878	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
27	BCLAF1	chr6:31757086-31757555	GM12878	blood:	n/a	n/a
28	BCLAF1	chr6:31763162-31763979	GM12878	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
29	BCLAF1	chr6:31763200-31764057	K562	blood:	n/a	chr6:31763469-31763482 chr6:31763390-31763403 chr6:31763475-31763488 chr6:31763803-31763816 chr6:31763526-31763539
30	BHLHE40	chr6:31763314-31764058	GM12878	blood:	n/a	chr6:31763475-31763491 chr6:31763368-31763384 chr6:31763467-31763483
31	BHLHE40	chr6:31763273-31763916	HepG2	liver:	n/a	chr6:31763475-31763491 chr6:31763368-31763384 chr6:31763467-31763483
32	BHLHE40	chr6:31744537-31745627	K562	blood:	n/a	n/a
33	BHLHE40	chr6:31762008-31764113	K562	blood:	n/a	chr6:31763475-31763491 chr6:31763368-31763384 chr6:31763467-31763483
34	BHLHE40	chr6:31762386-31762600	HepG2	liver:	n/a	n/a
35	BHLHE40	chr6:31759175-31759452	K562	blood:	n/a	n/a
36	BRCA1	chr6:31763007-31763305	Hela-S3	cervix:	n/a	n/a
37	BRCA1	chr6:31763118-31763294	HepG2	liver:	n/a	n/a
38	BRCA1	chr6:31763367-31763932	H1-hESC	embryonic stem cell:	n/a	n/a
39	BRCA1	chr6:31763593-31763894	HepG2	liver:	n/a	n/a
40	BRCA1	chr6:31763685-31764054	Hela-S3	cervix:	n/a	n/a
41	CBX3	chr6:31744203-31746270	K562	blood:	n/a	n/a
42	CBX3	chr6:31762834-31764422	K562	blood:	n/a	n/a
43	CBX3	chr6:31761898-31762762	K562	blood:	n/a	n/a
44	CBX3	chr6:31762810-31764194	K562	blood:	n/a	n/a
45	CCNT2	chr6:31762037-31762879	K562	blood:	n/a	chr6:31762577-31762586 chr6:31762207-31762227
46	CCNT2	chr6:31763079-31764065	K562	blood:	n/a	n/a
47	CEBPB	chr6:31761944-31762625	K562	blood:	n/a	n/a
48	CEBPB	chr6:31763462-31763978	H1-hESC	embryonic stem cell:	n/a	n/a
49	CEBPB	chr6:31762166-31762548	K562	blood:	n/a	n/a
50	CEBPB	chr6:31763691-31763701	K562	blood:	n/a	n/a

(count:6235 , 50 per page) page: 1 2 3 4 5 6 7 ... 125

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31760762-31760812	AG09309	skin:	n/a
2	chr6:31758862-31758912	HRCEpiC	kidney:	n/a
3	chr6:31763435-31763485	AG09319	gingival:	n/a
4	chr6:31763370-31763420	SK-N-SH_RA	brain:	n/a
5	chr6:31762442-31762492	HRCEpiC	kidney:	n/a
6	chr6:31746795-31746845	HEK293	kidney:	embryo
7	chr6:31747026-31747076	HEK293	kidney:	embryo
8	chr6:31763470-31763520	SK-N-SH	brain:	n/a
9	chr6:31762680-31762730	H1-hESC	embryonic stem cell:	embryo
10	chr6:31758862-31758912	HL-60	blood:	n/a
11	chr6:31763541-31763591	HepG2	liver:	n/a
12	chr6:31750470-31750520	HNPCEpiC	eye:	n/a
13	chr6:31763370-31763420	HCM	heart:	n/a
14	chr6:31760762-31760812	AG09309	skin:	n/a
15	chr6:31758862-31758912	HRCEpiC	kidney:	n/a
16	chr6:31763435-31763485	AG09319	gingival:	n/a
17	chr6:31763370-31763420	SK-N-SH_RA	brain:	n/a
18	chr6:31762442-31762492	HRCEpiC	kidney:	n/a
19	chr6:31746795-31746845	HEK293	kidney:	embryo
20	chr6:31747026-31747076	HEK293	kidney:	embryo
21	chr6:31763470-31763520	SK-N-SH	brain:	n/a
22	chr6:31762680-31762730	H1-hESC	embryonic stem cell:	embryo
23	chr6:31758862-31758912	HL-60	blood:	n/a
24	chr6:31763541-31763591	HepG2	liver:	n/a
25	chr6:31750470-31750520	HNPCEpiC	eye:	n/a
26	chr6:31763370-31763420	HCM	heart:	n/a
27	chr6:31747210-31747260	HAEpiC	amniotic membrane:	n/a
28	chr6:31746941-31746991	HepG2	liver:	n/a
29	chr6:31760521-31760571	LNCaP	prostate:	n/a
30	chr6:31762680-31762730	NT2-D1	testis:	n/a
31	chr6:31762688-31762738	SK-N-SH	brain:	n/a
32	chr6:31759825-31759875	AG09319	gingival:	n/a
33	chr6:31746114-31746164	HCF	heart:	n/a
34	chr6:31763285-31763335	HAEpiC	amniotic membrane:	n/a
35	chr6:31763819-31763869	RPTEC	kidney:	n/a
36	chr6:31763282-31763332	NH-A	brain:	n/a
37	chr6:31745821-31745871	PANC-1	pancreas:	n/a
38	chr6:31760345-31760395	K562	blood:	n/a
39	chr6:31759412-31759462	Hela-S3	cervix:	n/a
40	chr6:31758862-31758912	GM06990	blood:	n/a
41	chr6:31747023-31747073	GM12891	blood:	n/a
42	chr6:31762719-31762769	BE2_C	brain:	n/a
43	chr6:31760383-31760433	HRE	kidney:	n/a
44	chr6:31748160-31748210	HRPEpiC	eye:	n/a
45	chr6:31747026-31747076	AG04450	lung:	fetal
46	chr6:31748160-31748210	SAEC	small airway:	n/a
47	chr6:31747433-31747483	MCF-7	breast:	n/a
48	chr6:31763819-31763869	NHBE	bronchial:	n/a
49	chr6:31746814-31746864	SKMC	muscle:	n/a
50	chr6:31759806-31759856	PFSK-1	brain:	n/a

(count:67 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:31764845..31767639-chr6:31837526..31839294,2	K562	blood:
2	chr6:31763649..31765429-chr6:31938517..31942129,4	K562	blood:
3	chr6:31620739..31623442-chr6:31750369..31752880,2	MCF-7	breast:
4	chr6:31695390..31696984-chr6:31762234..31763768,2	MCF-7	breast:
5	chr6:31685559..31688052-chr6:31762150..31763709,2	MCF-7	breast:
6	chr6:31762561..31765176-chr6:31866590..31868817,2	MCF-7	breast:
7	chr6:31684792..31688095-chr6:31761930..31764765,3	MCF-7	breast:
8	chr6:31761047..31764270-chr6:31827785..31831725,4	MCF-7	breast:
9	chr6:31761979..31764717-chr6:31829414..31832230,4	MCF-7	breast:
10	chr6:31761456..31762985-chr6:31846516..31848351,2	K562	blood:
11	chr6:31758779..31760923-chr6:31939769..31942169,2	K562	blood:
12	chr6:31761963..31763938-chr6:32162269..32164335,2	MCF-7	breast:
13	chr6:31696116..31699055-chr6:31743914..31747307,3	MCF-7	breast:
14	chr6:31763546..31764167-chr6:31782631..31783559,2	K562	blood:
15	chr6:31752972..31755062-chr6:31868353..31870238,2	K562	blood:
16	chr6:31745135..31746968-chr6:31753465..31755555,2	MCF-7	breast:
17	chr6:31625699..31629901-chr6:31762894..31764968,3	MCF-7	breast:
18	chr6:31758020..31763887-chr6:31863868..31868391,6	K562	blood:
19	chr6:31735011..31745595-chr6:31798203..31806127,22	MCF-7	breast:
20	chr6:31619065..31621303-chr6:31762386..31764649,2	MCF-7	breast:
21	chr6:31759482..31765185-chr6:31781824..31784897,13	MCF-7	breast:
22	chr6:31750326..31751829-chr6:31829443..31831754,2	MCF-7	breast:
23	chr6:31758631..31763066-chr6:31827655..31831615,4	K562	blood:
24	chr6:31762216..31763831-chr6:31854405..31856951,2	MCF-7	breast:
25	chr6:31743360..31746217-chr6:31755901..31759903,4	MCF-7	breast:
26	chr6:31737226..31750413-chr6:31786206..31805473,50	MCF-7	breast:
27	chr6:31763762..31765403-chr6:31864017..31865779,2	MCF-7	breast:
28	chr6:31754468..31756767-chr6:31794972..31797010,2	MCF-7	breast:
29	chr6:31649204..31651280-chr6:31762211..31763800,2	MCF-7	breast:
30	chr6:31745070..31746845-chr6:31830028..31832915,2	MCF-7	breast:
31	chr6:31741149..31744902-chr6:31760858..31763694,5	MCF-7	breast:
32	chr6:31648224..31648787-chr6:31758999..31759731,2	MCF-7	breast:
33	chr6:31743326..31746438-chr6:31828635..31833007,4	K562	blood:
34	chr6:31696888..31697817-chr6:31762900..31763783,2	K562	blood:
35	chr17:56594989..56597705-chr6:31762274..31764941,2	MCF-7	breast:
36	chr6:31587253..31589657-chr6:31761134..31763419,2	MCF-7	breast:
37	chr6:31707530..31710458-chr6:31763602..31765832,2	MCF-7	breast:
38	chr6:31620215..31622719-chr6:31761944..31763523,2	MCF-7	breast:
39	chr6:31763803..31765429-chr6:31940244..31942129,2	K562	blood:
40	chr6:31647614..31649375-chr6:31762314..31763878,2	MCF-7	breast:
41	chr6:31762749..31764673-chr6:32143789..32146313,2	K562	blood:
42	chr6:31743287..31747076-chr6:31793437..31796925,5	MCF-7	breast:
43	chr6:31743107..31747994-chr6:31781956..31785553,7	MCF-7	breast:
44	chr6:31745758..31747408-chr6:31800818..31802986,2	MCF-7	breast:
45	chr15:90808542..90809340-chr6:31762980..31763831,2	Hela-S3	cervix:
46	chr6:31764794..31767222-chr6:31789462..31791730,2	MCF-7	breast:
47	chr6:31760815..31765798-chr6:31772413..31777523,17	MCF-7	breast:
48	chr6:31702768..31704359-chr6:31759116..31761149,2	MCF-7	breast:
49	chr6:31764734..31766726-chr6:31783206..31784816,2	MCF-7	breast:
50	chr6:31507944..31511146-chr6:31743964..31746169,3	K562	blood:

No data

Variant related genes	Relation type
ENSG00000201555	TF binding region
VWA7	TF binding region
VARS	TF binding region
ENSG00000201555	CpG island
VWA7	CpG island
VARS	CpG island
ENSG00000204371	chromatin interactions
ENSG00000204388	chromatin interactions
ENSG00000265236	chromatin interactions
ENSG00000204444	chromatin interactions
ENSG00000201754	chromatin interactions
ENSG00000264672	chromatin interactions
ENSG00000201555	chromatin interactions
ENSG00000204310	chromatin interactions
ENSG00000266776	chromatin interactions
ENSG00000204308	chromatin interactions
ENSG00000182768	chromatin interactions
ENSG00000213722	chromatin interactions
ENSG00000204392	chromatin interactions
ENSG00000213654	chromatin interactions
ENSG00000204420	chromatin interactions
ENSG00000204366	chromatin interactions
ENSG00000204387	chromatin interactions
ENSG00000227198	chromatin interactions
ENSG00000201823	chromatin interactions
ENSG00000204469	chromatin interactions
ENSG00000206337	chromatin interactions
ENSG00000168477	chromatin interactions
ENSG00000166278	chromatin interactions
ENSG00000235663	chromatin interactions
ENSG00000204394	chromatin interactions
ENSG00000204385	chromatin interactions
ENSG00000233902	chromatin interactions
ENSG00000204389	chromatin interactions
ENSG00000198563	chromatin interactions
ENSG00000204463	chromatin interactions
ENSG00000204386	chromatin interactions
ENSG00000234006	chromatin interactions
ENSG00000204428	chromatin interactions
ENSG00000108389	chromatin interactions
ENSG00000204410	chromatin interactions
ENSG00000204396	chromatin interactions
ENSG00000204390	chromatin interactions
ENSG00000204348	chromatin interactions
ENSG00000204344	chromatin interactions
ENSG00000204439	chromatin interactions
ENSG00000213719	chromatin interactions
ENSG00000255152	chromatin interactions
ENSG00000204427	chromatin interactions

Extended variants
information (count: 666 )
Associated
traits (count: 131 )

Variant overlapped rSNPs/rCNVs (count:666 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs707927	chr6:31745518-31745519	Weak transcription Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs530355950	chr6:31745616-31745617	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
3	rs73400268	chr6:31745648-31745649	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs560845864	chr6:31745673-31745674	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
5	rs181005754	chr6:31745694-31745695	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
6	rs371339629	chr6:31745790-31745791	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
7	rs184473551	chr6:31745821-31745822	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
8	rs538472449	chr6:31745911-31745912	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
9	rs538498015	chr6:31746012-31746013	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
10	rs141348225	chr6:31746067-31746068	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
11	rs188997510	chr6:31746135-31746136	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	16 gene(s)	Overlapped CNVs	n/a
12	rs543784249	chr6:31746215-31746216	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
13	rs143940284	chr6:31746219-31746220	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
14	rs207466851	chr6:31746224-31746225	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
15	rs565263152	chr6:31746294-31746295	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
16	rs376909809	chr6:31746299-31746300	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
17	rs554771420	chr6:31746379-31746380	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
18	rs576425561	chr6:31746394-31746395	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
19	rs117133761	chr6:31746402-31746403	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
20	rs182438884	chr6:31746414-31746415	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
21	rs187063234	chr6:31746522-31746523	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
22	rs909267	chr6:31746548-31746549	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Enhancers	TF binding region Chromatin interactive region	13 gene(s)	Overlapped CNVs	n/a
23	rs190737186	chr6:31746669-31746670	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
24	rs575062372	chr6:31746740-31746741	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
25	rs111682977	chr6:31746743-31746744	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
26	rs139977182	chr6:31746770-31746771	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
27	rs149834599	chr6:31746771-31746772	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
28	rs145802701	chr6:31746774-31746775	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
29	rs563920745	chr6:31746794-31746795	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
30	rs149065283	chr6:31746795-31746796	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
31	rs375257266	chr6:31746806-31746807	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
32	rs368075745	chr6:31746820-31746821	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
33	rs181542871	chr6:31746821-31746822	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
34	rs185850545	chr6:31746857-31746858	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
35	rs145835613	chr6:31746865-31746866	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
36	rs141077941	chr6:31746875-31746876	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
37	rs140736335	chr6:31746920-31746921	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
38	rs200588763	chr6:31746948-31746949	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
39	rs376835939	chr6:31746956-31746957	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
40	rs530019241	chr6:31746958-31746959	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
41	rs370974355	chr6:31746961-31746962	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
42	rs145439397	chr6:31746972-31746973	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
43	rs371570157	chr6:31746992-31746993	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
44	rs548042700	chr6:31747010-31747011	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
45	rs61730576	chr6:31747011-31747012	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
46	rs537143804	chr6:31747037-31747038	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
47	rs559132372	chr6:31747039-31747040	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
48	rs190227457	chr6:31747041-31747042	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
49	rs182780892	chr6:31747088-31747089	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region CpG island Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
50	rs150093697	chr6:31747117-31747118	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:131)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Breast cancer	22844521	CNVD
Gestational infection	22844521	CNVD
HIV/AIDS	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1338 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31731800-31749600	Weak transcription	HUVEC	blood vessel
2	chr6:31734600-31746600	Weak transcription	Brain Angular Gyrus	brain
3	chr6:31734800-31745600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:31738800-31745800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr6:31739800-31746000	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr6:31741000-31745600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr6:31741200-31745800	Weak transcription	Brain Substantia Nigra	brain
8	chr6:31741400-31745600	Weak transcription	Dnd41	blood
9	chr6:31741800-31745600	Enhancers	Placenta	Placenta
10	chr6:31742600-31746000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr6:31742800-31745800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr6:31742800-31746400	Enhancers	Liver	Liver
13	chr6:31742800-31746400	Flanking Active TSS	HepG2	liver
14	chr6:31743000-31745800	Enhancers	Primary T helper cells PMA-I stimulated	--
15	chr6:31743200-31745600	Enhancers	Primary T killer memory cells from peripheral blood	blood
16	chr6:31743400-31745600	Enhancers	Primary T helper naive cells from peripheral blood	blood
17	chr6:31743400-31745800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
18	chr6:31743400-31745800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
19	chr6:31743600-31745800	Weak transcription	H9 Cell Line	embryonic stem cell
20	chr6:31744200-31745600	Enhancers	Primary monocytes fromperipheralblood	blood
21	chr6:31744200-31745600	Enhancers	Primary hematopoietic stem cells	blood
22	chr6:31744200-31745600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
23	chr6:31744200-31745600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
24	chr6:31744200-31745600	Flanking Active TSS	Hela-S3	cervix
25	chr6:31744200-31745800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
26	chr6:31744200-31745800	Enhancers	NH-A	brain
27	chr6:31744200-31746600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr6:31744200-31746600	Genic enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr6:31744400-31745600	Enhancers	Primary neutrophils fromperipheralblood	blood
30	chr6:31744400-31745600	Enhancers	Ovary	ovary
31	chr6:31744400-31745600	Flanking Active TSS	A549	lung
32	chr6:31744600-31745600	Enhancers	HSMM	muscle
33	chr6:31744600-31745800	Genic enhancers	Cortex derived primary cultured neurospheres	brain
34	chr6:31744600-31745800	Enhancers	Fetal Kidney	kidney
35	chr6:31744800-31745600	Genic enhancers	Right Atrium	heart
36	chr6:31744800-31745800	Enhancers	HSMMtube	muscle
37	chr6:31745000-31745600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
38	chr6:31745000-31745600	Enhancers	Muscle Satellite Cultured Cells	--
39	chr6:31745000-31745600	Transcr. at gene 5' and 3'	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr6:31745000-31745600	Enhancers	Rectal Mucosa Donor 29	rectum
41	chr6:31745000-31745800	Enhancers	Primary T helper cells fromperipheralblood	blood
42	chr6:31745000-31746000	Enhancers	Stomach Mucosa	stomach
43	chr6:31745000-31746400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr6:31745000-31746400	Genic enhancers	Fetal Intestine Small	intestine
45	chr6:31745000-31746600	Enhancers	Fetal Heart	heart
46	chr6:31745000-31746800	Weak transcription	Aorta	Aorta
47	chr6:31745000-31750600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
48	chr6:31745000-31760200	Weak transcription	Psoas Muscle	Psoas
49	chr6:31745000-31762400	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr6:31745200-31745600	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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