Variant report

Variant	nsv884491
Chromosome Location	chr6:31861207-31872551
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1319)
CpG islands
(count:8000)
Chromatin interactive
region (count:112)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1319 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:31871739-31872027	K562	blood:	n/a	n/a
2	ARID3A	chr6:31869858-31870541	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:31865521-31865662	HepG2	liver:	n/a	n/a
4	ATF2	chr6:31869758-31870167	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr6:31869763-31870212	GM12878	blood:	n/a	n/a
6	ATF2	chr6:31865449-31866277	GM12878	blood:	n/a	n/a
7	ATF3	chr6:31865300-31865665	HepG2	liver:	n/a	chr6:31865348-31865357
8	ATF3	chr6:31865397-31865665	GM12878	blood:	n/a	n/a
9	ATF3	chr6:31865336-31865746	K562	blood:	n/a	chr6:31865348-31865357
10	ATF3	chr6:31865358-31865680	GM12878	blood:	n/a	n/a
11	ATF3	chr6:31865393-31865581	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr6:31869336-31870597	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr6:31869616-31869784	K562	blood:	n/a	n/a
14	BACH1	chr6:31865475-31865607	H1-hESC	embryonic stem cell:	n/a	n/a
15	BCL3	chr6:31869825-31870455	A549	lung:	n/a	chr6:31870205-31870218 chr6:31870203-31870216
16	BCL3	chr6:31865516-31866626	A549	lung:	n/a	n/a
17	BCL3	chr6:31869271-31870396	GM12878	blood:	n/a	chr6:31869712-31869725 chr6:31869468-31869477 chr6:31869780-31869789 chr6:31870205-31870218 chr6:31869292-31869305 chr6:31870203-31870216 chr6:31869312-31869325 chr6:31869514-31869523
18	BCL3	chr6:31865934-31866412	A549	lung:	n/a	n/a
19	BCLAF1	chr6:31869760-31870326	GM12878	blood:	n/a	chr6:31869780-31869789 chr6:31870205-31870218 chr6:31870203-31870216
20	BHLHE40	chr6:31869276-31870379	K562	blood:	n/a	chr6:31870210-31870226 chr6:31869776-31869792 chr6:31870202-31870218
21	BHLHE40	chr6:31864968-31866504	K562	blood:	n/a	chr6:31865197-31865213 chr6:31865051-31865067
22	BHLHE40	chr6:31867706-31867890	K562	blood:	n/a	n/a
23	BHLHE40	chr6:31869353-31870389	GM12878	blood:	n/a	chr6:31870210-31870226 chr6:31869776-31869792 chr6:31870202-31870218
24	BHLHE40	chr6:31865008-31865743	HepG2	liver:	n/a	chr6:31865197-31865213 chr6:31865051-31865067
25	BHLHE40	chr6:31865521-31865544	A549	lung:	n/a	n/a
26	BHLHE40	chr6:31871776-31872018	K562	blood:	n/a	n/a
27	BHLHE40	chr6:31869617-31870384	HepG2	liver:	n/a	chr6:31870210-31870226 chr6:31869776-31869792 chr6:31870202-31870218
28	BHLHE40	chr6:31865026-31865739	GM12878	blood:	n/a	chr6:31865197-31865213 chr6:31865051-31865067
29	BHLHE40	chr6:31868935-31869016	K562	blood:	n/a	n/a
30	BRCA1	chr6:31865937-31866511	Hela-S3	cervix:	n/a	n/a
31	BRCA1	chr6:31870083-31870120	HepG2	liver:	n/a	n/a
32	BRCA1	chr6:31869862-31870110	H1-hESC	embryonic stem cell:	n/a	n/a
33	BRCA1	chr6:31869852-31870059	Hela-S3	cervix:	n/a	n/a
34	CBX3	chr6:31868572-31869586	K562	blood:	n/a	n/a
35	CBX3	chr6:31869669-31870237	K562	blood:	n/a	n/a
36	CBX3	chr6:31865390-31866734	K562	blood:	n/a	n/a
37	CCNT2	chr6:31866130-31866152	K562	blood:	n/a	n/a
38	CCNT2	chr6:31864877-31865761	K562	blood:	n/a	chr6:31865396-31865405
39	CCNT2	chr6:31869146-31870414	K562	blood:	n/a	chr6:31869655-31869664 chr6:31869774-31869783 chr6:31869236-31869245 chr6:31869577-31869586 chr6:31869288-31869297 chr6:31869440-31869449 chr6:31869779-31869788
40	CEBPB	chr6:31869816-31870074	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr6:31865390-31865726	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr6:31861687-31861828	IMR90	lung:	n/a	n/a
43	CEBPB	chr6:31869824-31870477	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr6:31869855-31869966	HepG2	liver:	n/a	n/a
45	CEBPD	chr6:31869397-31870309	HepG2	liver:	n/a	n/a
46	CEBPD	chr6:31864817-31865721	HepG2	liver:	n/a	n/a
47	CEBPD	chr6:31869463-31870474	HepG2	liver:	n/a	n/a
48	CEBPD	chr6:31869135-31870391	K562	blood:	n/a	n/a
49	CEBPD	chr6:31869664-31870228	K562	blood:	n/a	n/a
50	CEBPD	chr6:31865285-31865703	HepG2	liver:	n/a	n/a

(count:8000 , 50 per page) page: 1 2 3 4 5 6 7 ... 160

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31865522-31865572	PrEC	prostate:	n/a
2	chr6:31866825-31866875	NT2-D1	testis:	n/a
3	chr6:31868452-31868502	GM06990	blood:	n/a
4	chr6:31866072-31866122	MCF-7	breast:	n/a
5	chr6:31865909-31865959	AoSMC	blood vessel:	n/a
6	chr6:31867919-31867969	Hepatocyte	liver:	n/a
7	chr6:31870783-31870833	SKMC	muscle:	n/a
8	chr6:31869588-31869638	ProgFib	skin:	n/a
9	chr6:31870840-31870890	HRPEpiC	eye:	n/a
10	chr6:31865522-31865572	PrEC	prostate:	n/a
11	chr6:31866825-31866875	NT2-D1	testis:	n/a
12	chr6:31868452-31868502	GM06990	blood:	n/a
13	chr6:31866072-31866122	MCF-7	breast:	n/a
14	chr6:31865909-31865959	AoSMC	blood vessel:	n/a
15	chr6:31867919-31867969	Hepatocyte	liver:	n/a
16	chr6:31870783-31870833	SKMC	muscle:	n/a
17	chr6:31869588-31869638	ProgFib	skin:	n/a
18	chr6:31870840-31870890	HRPEpiC	eye:	n/a
19	chr6:31869534-31869584	A549	lung:	n/a
20	chr6:31867956-31868006	AG09309	skin:	n/a
21	chr6:31865663-31865713	Hela-S3	cervix:	n/a
22	chr6:31865794-31865844	CMK	blood:	n/a
23	chr6:31870783-31870833	RPTEC	kidney:	n/a
24	chr6:31869304-31869354	RPTEC	kidney:	n/a
25	chr6:31868470-31868520	HUVEC	blood vessel:	n/a
26	chr6:31866825-31866875	GM06990	blood:	n/a
27	chr6:31868025-31868075	AG04449	skin:	fetal
28	chr6:31866037-31866087	ProgFib	skin:	n/a
29	chr6:31866208-31866258	AG10803	skin:	n/a
30	chr6:31868452-31868502	CMK	blood:	n/a
31	chr6:31868813-31868863	NHDF-neo	bronchial:	n/a
32	chr6:31867836-31867886	A549	lung:	n/a
33	chr6:31867757-31867807	Caco-2	colon:	n/a
34	chr6:31870305-31870355	GM12891	blood:	n/a
35	chr6:31869521-31869571	HRCEpiC	kidney:	n/a
36	chr6:31866286-31866336	HPAEpiC	pulmonary alveolar:	n/a
37	chr6:31868169-31868219	AG09309	skin:	n/a
38	chr6:31866825-31866875	GM12892	blood:	n/a
39	chr6:31866068-31866118	GM12878	blood:	n/a
40	chr6:31867707-31867757	SKMC	muscle:	n/a
41	chr6:31865909-31865959	HRPEpiC	eye:	n/a
42	chr6:31866508-31866558	PFSK-1	brain:	n/a
43	chr6:31868809-31868859	H1-hESC	embryonic stem cell:	embryo
44	chr6:31864077-31864127	PFSK-1	brain:	n/a
45	chr6:31864574-31864624	PANC-1	pancreas:	n/a
46	chr6:31868418-31868468	GM12892	blood:	n/a
47	chr6:31869565-31869615	NT2-D1	testis:	n/a
48	chr6:31867847-31867897	NT2-D1	testis:	n/a
49	chr6:31866020-31866070	T-47D	breast:	n/a
50	chr6:31865118-31865168	HUVEC	blood vessel:	n/a

(count:112 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:31800669..31805219-chr6:31862460..31868046,11	K562	blood:
2	chr6:31871171..31873867-chr6:31879950..31882707,2	K562	blood:
3	chr6:31627970..31635325-chr6:31864036..31871429,12	K562	blood:
4	chr6:31827799..31831011-chr6:31868395..31870845,5	MCF-7	breast:
5	chr6:31844613..31847430-chr6:31865372..31868871,3	MCF-7	breast:
6	chr6:31832130..31834569-chr6:31860075..31862005,2	K562	blood:
7	chr6:31856075..31861147-chr6:31862978..31867521,9	K562	blood:
8	chr6:31867782..31870627-chr6:32121344..32123906,2	K562	blood:
9	chr6:31870972..31872047-chr6:31920053..31920679,3	MCF-7	breast:
10	chr6:31829040..31831339-chr6:31870895..31873682,3	K562	blood:
11	chr6:31864770..31867210-chr6:31916768..31918647,2	K562	blood:
12	chr6:31829900..31830743-chr6:31865500..31866056,2	MCF-7	breast:
13	chr6:31761659..31764051-chr6:31869423..31871582,3	K562	blood:
14	chr6:31851397..31853749-chr6:31868487..31870497,2	MCF-7	breast:
15	chr6:31798354..31804916-chr6:31860790..31871982,18	MCF-7	breast:
16	chr6:31829696..31833310-chr6:31869980..31872601,4	K562	blood:
17	chr6:31867075..31869848-chr6:31926953..31928795,2	K562	blood:
18	chr6:31870410..31872012-chr6:32054069..32057423,3	K562	blood:
19	chr6:31865534..31868319-chr6:31914405..31916716,2	MCF-7	breast:
20	chr6:31869703..31871388-chr6:31919073..31921188,2	K562	blood:
21	chr6:31851566..31853842-chr6:31864020..31866737,2	MCF-7	breast:
22	chr6:31846442..31848048-chr6:31868032..31869941,2	K562	blood:
23	chr6:31850468..31854025-chr6:31863862..31867993,5	MCF-7	breast:
24	chr4:139163040..139163916-chr6:31869733..31870234,2	HCT-116	colon:
25	chr6:31509091..31511742-chr6:31868193..31871571,3	MCF-7	breast:
26	chr6:31870200..31872258-chr6:31872448..31875801,4	K562	blood:
27	chr6:31843997..31846007-chr6:31863630..31865953,2	K562	blood:
28	chr6:31863494..31865862-chr6:32150158..32153094,2	K562	blood:
29	chr6:31846387..31850562-chr6:31859687..31861704,3	MCF-7	breast:
30	chr6:31780956..31783456-chr6:31865283..31866829,2	K562	blood:
31	chr6:31629180..31631831-chr6:31863567..31866267,3	K562	blood:
32	chr6:31868360..31871056-chr6:32011358..32014091,3	K562	blood:
33	chr6:31800867..31807275-chr6:31862460..31868132,16	K562	blood:
34	chr6:31761659..31763884-chr6:31868027..31870923,3	K562	blood:
35	chr6:31836840..31843251-chr6:31862592..31868285,8	MCF-7	breast:
36	chr6:31801734..31803566-chr6:31863143..31864724,2	MCF-7	breast:
37	chr6:31864133..31871768-chr6:31886295..31891953,13	MCF-7	breast:
38	chr6:31865653..31867869-chr6:31911322..31913158,2	MCF-7	breast:
39	chr6:31668504..31670633-chr6:31865302..31866839,2	K562	blood:
40	chr6:31865326..31867816-chr6:32162690..32165281,2	K562	blood:
41	chr6:31801352..31804698-chr6:31868339..31871951,3	K562	blood:
42	chr6:31859669..31862692-chr6:31863697..31866493,6	MCF-7	breast:
43	chr6:31828023..31833065-chr6:31863439..31869544,9	K562	blood:
44	chr6:31794734..31796775-chr6:31868219..31871084,2	MCF-7	breast:
45	chr6:31743040..31745284-chr6:31866637..31868631,2	K562	blood:
46	chr6:31862589..31864971-chr6:31865421..31867201,2	MCF-7	breast:
47	chr6:31852573..31855279-chr6:31859068..31861656,3	MCF-7	breast:
48	chr6:31864741..31867831-chr6:31872315..31875298,3	K562	blood:
49	chr6:31863902..31865476-chr6:32142561..32145148,2	K562	blood:
50	chr6:31869602..31872162-chr6:31872448..31875986,6	K562	blood:

No data

Variant related genes	Relation type
ZBTB12	TF binding region
C2	TF binding region
EHMT2	TF binding region
ZBTB12	CpG island
C2	CpG island
EHMT2	CpG island
ENSG00000204385	chromatin interactions
ENSG00000201207	chromatin interactions
ENSG00000204344	chromatin interactions
ENSG00000204387	chromatin interactions
ENSG00000263020	chromatin interactions
ENSG00000204388	chromatin interactions
ENSG00000243649	chromatin interactions
ENSG00000221988	chromatin interactions
ENSG00000204305	chromatin interactions
ENSG00000237080	chromatin interactions
ENSG00000244255	chromatin interactions
ENSG00000204351	chromatin interactions
ENSG00000204386	chromatin interactions
ENSG00000201823	chromatin interactions
ENSG00000166278	chromatin interactions
ENSG00000204348	chromatin interactions
ENSG00000204438	chromatin interactions
ENSG00000087191	chromatin interactions
ENSG00000204463	chromatin interactions
ENSG00000204314	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000204301	chromatin interactions
ENSG00000204396	chromatin interactions
ENSG00000265236	chromatin interactions
ENSG00000258388	chromatin interactions
ENSG00000168477	chromatin interactions
ENSG00000204444	chromatin interactions
ENSG00000221267	chromatin interactions
ENSG00000108592	chromatin interactions
ENSG00000204310	chromatin interactions
ENSG00000213719	chromatin interactions
ENSG00000198563	chromatin interactions
ENSG00000204394	chromatin interactions
ENSG00000204371	chromatin interactions
ENSG00000204427	chromatin interactions
ENSG00000234006	chromatin interactions
ENSG00000204356	chromatin interactions
ENSG00000204389	chromatin interactions
ENSG00000204390	chromatin interactions
ENSG00000151012	chromatin interactions
ENSG00000204439	chromatin interactions
ENSG00000213654	chromatin interactions
ENSG00000204410	chromatin interactions
ENSG00000201754	chromatin interactions
ENSG00000266776	chromatin interactions
ENSG00000204435	chromatin interactions
ENSG00000204366	chromatin interactions
ENSG00000255152	chromatin interactions

Extended variants
information (count: 352 )
Associated
traits (count: 132 )

Variant overlapped rSNPs/rCNVs (count:352 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs28732164	chr6:31861207-31861208	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs374145540	chr6:31861230-31861231	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
3	rs146639678	chr6:31861252-31861253	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
4	rs533039661	chr6:31861265-31861266	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
5	rs141396582	chr6:31861269-31861270	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
6	rs183310399	chr6:31861296-31861297	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
7	rs527243853	chr6:31861360-31861361	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
8	rs548706832	chr6:31861361-31861362	Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
9	rs574974254	chr6:31861517-31861518	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
10	rs115290603	chr6:31861555-31861556	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
11	rs530320298	chr6:31861632-31861633	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
12	rs188712229	chr6:31861734-31861735	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
13	rs549930572	chr6:31861744-31861745	Weak transcription Strong transcription Genic enhancers	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
14	rs538743524	chr6:31861858-31861859	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
15	rs190863834	chr6:31861909-31861910	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
16	rs546974056	chr6:31861913-31861914	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
17	rs183364611	chr6:31861934-31861935	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
18	rs546237342	chr6:31861944-31861945	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
19	rs554681859	chr6:31861948-31861949	Weak transcription Strong transcription	Chromatin interactive region	8 gene(s)	Overlapped CNVs	n/a
20	rs143076102	chr6:31862003-31862004	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
21	rs188060948	chr6:31862133-31862134	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
22	rs148253466	chr6:31862203-31862204	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
23	rs577555362	chr6:31862204-31862205	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
24	rs541655013	chr6:31862209-31862210	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
25	rs560246092	chr6:31862216-31862217	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
26	rs527407087	chr6:31862241-31862242	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
27	rs542572219	chr6:31862311-31862312	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
28	rs560753509	chr6:31862312-31862313	Weak transcription Strong transcription	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
29	rs3130680	chr6:31862322-31862323	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs191375257	chr6:31862330-31862331	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
31	rs571099262	chr6:31862334-31862335	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
32	rs547160665	chr6:31862350-31862351	Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
33	rs184605008	chr6:31862353-31862354	Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
34	rs536381283	chr6:31862389-31862390	Weak transcription Strong transcription	CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
35	rs554929370	chr6:31862478-31862479	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
36	rs146976699	chr6:31862492-31862493	Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs9267662	chr6:31862499-31862500	Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs138207889	chr6:31862500-31862501	Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs9469068	chr6:31862564-31862565	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs541612549	chr6:31862572-31862573	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
41	rs553616573	chr6:31862581-31862582	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
42	rs550727152	chr6:31862586-31862587	Weak transcription Strong transcription	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
43	rs66869567	chr6:31862604-31862605	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
44	rs3037244	chr6:31862606-31862607	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
45	rs201799295	chr6:31862607-31862608	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
46	rs572153204	chr6:31862614-31862615	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
47	rs542384399	chr6:31862650-31862651	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
48	rs560934632	chr6:31862662-31862663	Weak transcription Strong transcription	Chromatin interactive region	7 gene(s)	Overlapped CNVs	n/a
49	rs569077386	chr6:31862674-31862675	Weak transcription Strong transcription	CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
50	rs575994817	chr6:31862693-31862694	Weak transcription Strong transcription	CpG island Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:132)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ovarian cancer	21781307	CNVD
Ependymoma	19289631	CNVD
Breast cancer	22844521	CNVD
Gestational infection	22844521	CNVD
HIV/AIDS	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Breast cancer	21364760	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1490 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31833200-31864200	Weak transcription	Fetal Heart	heart
2	chr6:31847000-31863200	Strong transcription	Primary T helper cells fromperipheralblood	blood
3	chr6:31847000-31863600	Strong transcription	Fetal Brain Female	brain
4	chr6:31847000-31864000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:31847200-31861400	Strong transcription	Spleen	Spleen
6	chr6:31847200-31863800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr6:31847200-31864000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr6:31847200-31864200	Strong transcription	Fetal Stomach	stomach
9	chr6:31847200-31864200	Strong transcription	Thymus	Thymus
10	chr6:31847400-31861600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr6:31847400-31861600	Strong transcription	Primary monocytes fromperipheralblood	blood
12	chr6:31847400-31861600	Strong transcription	Primary T helper cells PMA-I stimulated	--
13	chr6:31847400-31861600	Strong transcription	Brain Anterior Caudate	brain
14	chr6:31847400-31861600	Strong transcription	Monocytes-CD14+_RO01746	blood
15	chr6:31847400-31862800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr6:31847400-31863200	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr6:31847400-31863200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr6:31847400-31863400	Strong transcription	Duodenum Smooth Muscle	Duodenum
19	chr6:31847400-31863600	Strong transcription	Brain Germinal Matrix	brain
20	chr6:31847400-31863800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr6:31847400-31863800	Strong transcription	Primary T cells from cord blood	blood
22	chr6:31847400-31863800	Strong transcription	Skeletal Muscle Male	skeletal muscle
23	chr6:31847400-31864000	Strong transcription	H1 Cell Line	embryonic stem cell
24	chr6:31847400-31864000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr6:31847400-31864000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr6:31847400-31864000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
27	chr6:31847400-31864000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr6:31847400-31864000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr6:31847400-31864000	Strong transcription	Adipose Nuclei	Adipose
30	chr6:31847400-31864000	Strong transcription	Fetal Thymus	thymus
31	chr6:31847400-31864200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
32	chr6:31847400-31864200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
33	chr6:31847400-31864200	Strong transcription	Cortex derived primary cultured neurospheres	brain
34	chr6:31847400-31864400	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr6:31847400-31864400	Strong transcription	HUES64 Cell Line	embryonic stem cell
36	chr6:31847600-31861400	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr6:31847600-31863200	Strong transcription	Duodenum Mucosa	Duodenum
38	chr6:31847600-31863400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
39	chr6:31847600-31863800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr6:31847600-31864000	Strong transcription	Liver	Liver
41	chr6:31847600-31864000	Strong transcription	Brain Substantia Nigra	brain
42	chr6:31847600-31864200	Strong transcription	HUES6 Cell Line	embryonic stem cell
43	chr6:31847800-31861600	Strong transcription	Rectal Smooth Muscle	rectum
44	chr6:31847800-31864000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr6:31847800-31864000	Strong transcription	Fetal Intestine Small	intestine
46	chr6:31847800-31864200	Strong transcription	HUES48 Cell Line	embryonic stem cell
47	chr6:31847800-31864400	Strong transcription	Fetal Intestine Large	intestine
48	chr6:31847800-31864400	Strong transcription	Sigmoid Colon	Sigmoid Colon
49	chr6:31848000-31864000	Strong transcription	Stomach Smooth Muscle	stomach
50	chr6:31848000-31864200	Strong transcription	Fetal Muscle Leg	muscle

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Variant report

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