Variant report

Variant	nsv8850
Chromosome Location	chr11:85184749-85186942
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 75 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:75 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368559217	chr11:85184792-85184793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs571174595	chr11:85184817-85184818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs372016226	chr11:85184839-85184840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs540100654	chr11:85184851-85184852	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs375141056	chr11:85184986-85184987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs143452167	chr11:85185062-85185063	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs147992673	chr11:85185075-85185076	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs556043234	chr11:85185100-85185101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs574136181	chr11:85185206-85185207	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs78808780	chr11:85185209-85185210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs562842124	chr11:85185211-85185212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs559737829	chr11:85185217-85185218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs545419255	chr11:85185241-85185242	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs560175779	chr11:85185280-85185281	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs181497477	chr11:85185293-85185294	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs80038506	chr11:85185313-85185314	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs140776708	chr11:85185316-85185317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs561225829	chr11:85185343-85185344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs531274002	chr11:85185362-85185363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs186195486	chr11:85185406-85185407	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs188659409	chr11:85185483-85185484	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs181404918	chr11:85185484-85185485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs186380394	chr11:85185532-85185533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs144704518	chr11:85185559-85185560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs534499032	chr11:85185599-85185600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs75823814	chr11:85185600-85185601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs565305229	chr11:85185680-85185681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs369015227	chr11:85185684-85185685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs11234349	chr11:85185686-85185687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs556366371	chr11:85185712-85185713	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs578076801	chr11:85185718-85185719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs547880203	chr11:85185739-85185740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs372973643	chr11:85185778-85185779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs145537189	chr11:85185817-85185818	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs560538547	chr11:85185820-85185821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs571966017	chr11:85185829-85185830	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs142970454	chr11:85185846-85185847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs560724350	chr11:85185956-85185957	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs559932460	chr11:85185965-85185966	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs556039090	chr11:85186041-85186042	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs564821869	chr11:85186056-85186057	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs200659059	chr11:85186072-85186073	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs200145418	chr11:85186219-85186220	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs182644859	chr11:85186272-85186273	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs187236253	chr11:85186274-85186275	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs146143780	chr11:85186298-85186299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs565679227	chr11:85186303-85186304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs527961093	chr11:85186351-85186352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs548438218	chr11:85186367-85186368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs138944114	chr11:85186394-85186395	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	20844748	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Colorectal cancer	16912164	CNVD
Mental retardation	17847001	CNVD
Melanoma	19509136	CNVD
Sudden cardiac death	19188705	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Developmental delay	21147756	CNVD
Bipolar disorder	19114987	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ductal carcinoma	22052326	CNVD
Obesity	20622171	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:85181800-85194800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:85184000-85194800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr11:85184200-85187000	Weak transcription	Fetal Lung	lung
4	chr11:85184200-85194800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
5	chr11:85184400-85192600	Weak transcription	Pancreas	Pancrea
6	chr11:85184400-85194800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr11:85184400-85194800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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