Variant report

Variant	nsv885794
Chromosome Location	chr6:34561585-34673149
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2972)
CpG islands
(count:1284)
Chromatin interactive
region (count:191)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2972 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:34632507-34632645	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:34638142-34638153	K562	blood:	n/a	n/a
3	ARID3A	chr6:34629153-34629598	K562	blood:	n/a	n/a
4	ARID3A	chr6:34662211-34662447	K562	blood:	n/a	n/a
5	ARID3A	chr6:34577347-34578300	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:34583376-34583895	K562	blood:	n/a	n/a
7	ARID3A	chr6:34664598-34665247	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:34635074-34636020	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:34639228-34639397	K562	blood:	n/a	n/a
10	ARID3A	chr6:34641320-34642809	HepG2	liver:	n/a	chr6:34642696-34642712 chr6:34642697-34642713
11	ARID3A	chr6:34665665-34666071	K562	blood:	n/a	n/a
12	ARID3A	chr6:34577325-34577799	K562	blood:	n/a	n/a
13	ARID3A	chr6:34630308-34630658	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:34631569-34632815	K562	blood:	n/a	n/a
15	ARID3A	chr6:34570163-34570839	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:34578932-34579514	K562	blood:	n/a	n/a
17	ARID3A	chr6:34628998-34629132	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:34624480-34625772	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:34664800-34665428	K562	blood:	n/a	n/a
20	ARID3A	chr6:34624085-34624560	K562	blood:	n/a	chr6:34624394-34624410
21	ARID3A	chr6:34640649-34640721	K562	blood:	n/a	n/a
22	ARID3A	chr6:34648824-34649082	K562	blood:	n/a	n/a
23	ATF1	chr6:34639632-34639973	K562	blood:	n/a	n/a
24	ATF1	chr6:34578906-34579287	K562	blood:	n/a	n/a
25	ATF1	chr6:34631675-34632587	K562	blood:	n/a	n/a
26	ATF1	chr6:34625970-34626000	K562	blood:	n/a	n/a
27	ATF1	chr6:34647394-34647786	K562	blood:	n/a	n/a
28	ATF1	chr6:34597874-34598071	K562	blood:	n/a	n/a
29	ATF1	chr6:34629245-34629463	K562	blood:	n/a	n/a
30	ATF1	chr6:34664551-34665370	K562	blood:	n/a	chr6:34664738-34664752
31	ATF1	chr6:34665710-34666066	K562	blood:	n/a	n/a
32	ATF1	chr6:34624063-34624756	K562	blood:	n/a	n/a
33	ATF1	chr6:34565943-34566111	K562	blood:	n/a	n/a
34	ATF1	chr6:34577390-34577760	K562	blood:	n/a	n/a
35	ATF1	chr6:34583397-34583826	K562	blood:	n/a	n/a
36	ATF2	chr6:34639303-34639957	GM12878	blood:	n/a	n/a
37	ATF2	chr6:34648554-34649149	GM12878	blood:	n/a	n/a
38	ATF2	chr6:34664580-34664909	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
39	ATF2	chr6:34623880-34625072	GM12878	blood:	n/a	n/a
40	ATF2	chr6:34577334-34577701	GM12878	blood:	n/a	n/a
41	ATF2	chr6:34641172-34641942	GM12878	blood:	n/a	n/a
42	ATF2	chr6:34648723-34649122	GM12878	blood:	n/a	n/a
43	ATF2	chr6:34606629-34607601	GM12878	blood:	n/a	n/a
44	ATF2	chr6:34642495-34643030	GM12878	blood:	n/a	n/a
45	ATF2	chr6:34639461-34639976	GM12878	blood:	n/a	n/a
46	ATF2	chr6:34641174-34641915	GM12878	blood:	n/a	n/a
47	ATF2	chr6:34623868-34625660	GM12878	blood:	n/a	n/a
48	ATF2	chr6:34664567-34665160	GM12878	blood:	n/a	chr6:34664738-34664752
49	ATF2	chr6:34664580-34664940	H1-hESC	embryonic stem cell:	n/a	chr6:34664738-34664752
50	ATF2	chr6:34606664-34607716	GM12878	blood:	n/a	n/a

(count:1284 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:34665034-34665084	HCM	heart:	n/a
2	chr6:34666684-34666734	AG09309	skin:	n/a
3	chr6:34664703-34664753	MCF-7	breast:	n/a
4	chr6:34665034-34665084	HCM	heart:	n/a
5	chr6:34666684-34666734	AG09309	skin:	n/a
6	chr6:34664703-34664753	MCF-7	breast:	n/a
7	chr6:34664699-34664749	AG10803	skin:	n/a
8	chr6:34662875-34662925	SK-N-MC	brain:	n/a
9	chr6:34648170-34648220	ProgFib	skin:	n/a
10	chr6:34662875-34662925	HRPEpiC	eye:	n/a
11	chr6:34664488-34664538	GM06990	blood:	n/a
12	chr6:34665156-34665206	AoSMC	blood vessel:	n/a
13	chr6:34664887-34664937	ProgFib	skin:	n/a
14	chr6:34633133-34633183	SK-N-MC	brain:	n/a
15	chr6:34665034-34665084	HCT-116	colon:	n/a
16	chr6:34566245-34566295	U87	brain:	n/a
17	chr6:34563243-34563293	PrEC	prostate:	n/a
18	chr6:34664305-34664355	NB4	blood:	n/a
19	chr6:34660294-34660344	GM06990	blood:	n/a
20	chr6:34663155-34663205	SK-N-SH_RA	brain:	n/a
21	chr6:34663277-34663327	HEK293	kidney:	embryo
22	chr6:34664488-34664538	HPAEpiC	pulmonary alveolar:	n/a
23	chr6:34666684-34666734	AG04449	skin:	fetal
24	chr6:34665034-34665084	NT2-D1	testis:	n/a
25	chr6:34664703-34664753	Hela-S3	cervix:	n/a
26	chr6:34664699-34664749	PrEC	prostate:	n/a
27	chr6:34648170-34648220	RPTEC	kidney:	n/a
28	chr6:34663277-34663327	A549	lung:	n/a
29	chr6:34666684-34666734	HPAEpiC	pulmonary alveolar:	n/a
30	chr6:34664887-34664937	NB4	blood:	n/a
31	chr6:34663277-34663327	NHDF-neo	bronchial:	n/a
32	chr6:34664812-34664862	GM12891	blood:	n/a
33	chr6:34664215-34664265	LNCaP	prostate:	n/a
34	chr6:34664703-34664753	BJ	skin:	n/a
35	chr6:34625341-34625391	PANC-1	pancreas:	n/a
36	chr6:34664887-34664937	T-47D	breast:	n/a
37	chr6:34574629-34574679	BE2_C	brain:	n/a
38	chr6:34633133-34633183	SAEC	small airway:	n/a
39	chr6:34563243-34563293	HCPEpiC	choroid plexus:	n/a
40	chr6:34664699-34664749	RPTEC	kidney:	n/a
41	chr6:34664305-34664355	SKMC	muscle:	n/a
42	chr6:34666684-34666734	HCPEpiC	choroid plexus:	n/a
43	chr6:34664699-34664749	HEEpiC	esophagus:	n/a
44	chr6:34665034-34665084	MCF-7	breast:	n/a
45	chr6:34664305-34664355	NT2-D1	testis:	n/a
46	chr6:34662875-34662925	NB4	blood:	n/a
47	chr6:34569886-34569936	U87	brain:	n/a
48	chr6:34664305-34664355	AG09319	gingival:	n/a
49	chr6:34665156-34665206	BJ	skin:	n/a
50	chr6:34664812-34664862	LNCaP	prostate:	n/a

(count:191 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr6:34508607..34511346-chr6:34567639..34570139,2	K562	blood:
2	chr6:34570143..34573485-chr6:34575901..34578410,4	K562	blood:
3	chr6:34662895..34664989-chr6:34725317..34726977,2	MCF-7	breast:
4	chr6:34624656..34626741-chr6:34662281..34665982,4	MCF-7	breast:
5	chr6:34671509..34674335-chr6:34684957..34686904,2	K562	blood:
6	chr6:34627744..34634016-chr6:34660523..34667745,13	K562	blood:
7	chr6:34640245..34642363-chr6:34759538..34762413,2	K562	blood:
8	chr6:34605121..34606995-chr6:34607887..34610475,2	K562	blood:
9	chr6:34623901..34626181-chr6:34657612..34659436,2	MCF-7	breast:
10	chr6:34601092..34603459-chr6:34730647..34732860,2	K562	blood:
11	chr6:34521375..34525146-chr6:34564665..34566701,4	MCF-7	breast:
12	chr6:34645224..34648774-chr6:34663292..34667074,4	K562	blood:
13	chr6:34664734..34666755-chr6:34668036..34669637,2	K562	blood:
14	chr6:34494469..34496151-chr6:34577655..34579267,2	K562	blood:
15	chr6:34393119..34395075-chr6:34580866..34582644,2	K562	blood:
16	chr6:34608904..34611557-chr6:34612149..34614331,2	K562	blood:
17	chr6:34202035..34203669-chr6:34568608..34571560,2	K562	blood:
18	chr6:34556477..34558715-chr6:34566152..34568082,2	K562	blood:
19	chr6:34632043..34635334-chr6:34637313..34641742,9	K562	blood:
20	chr6:34585895..34587525-chr6:34592425..34595036,2	K562	blood:
21	chr6:34496972..34497706-chr6:34576720..34577905,3	MCF-7	breast:
22	chr6:34663247..34666234-chr6:34723415..34727175,3	K562	blood:
23	chr6:34656941..34658907-chr6:34661433..34663636,2	MCF-7	breast:
24	chr6:34359197..34361923-chr6:34576556..34579097,2	K562	blood:
25	chr6:34023643..34024284-chr6:34577063..34577946,2	K562	blood:
26	chr6:34584121..34585997-chr6:34662703..34665284,2	K562	blood:
27	chr6:34427357..34428310-chr6:34577023..34577948,4	K562	blood:
28	chr6:34605483..34607614-chr6:34627850..34629630,2	K562	blood:
29	chr6:34641071..34643184-chr6:34856512..34858479,2	K562	blood:
30	chr6:34216569..34217473-chr6:34577039..34578066,5	K562	blood:
31	chr6:34663482..34665135-chr6:34670765..34672477,2	MCF-7	breast:
32	chr6:34663382..34666828-chr6:34670260..34673795,4	K562	blood:
33	chr6:34610138..34612719-chr6:34663419..34665445,2	MCF-7	breast:
34	chr6:34624269..34626761-chr6:34723872..34726959,3	MCF-7	breast:
35	chr6:34657778..34659720-chr6:34722705..34725050,2	MCF-7	breast:
36	chr6:34659775..34661894-chr6:34663558..34666240,3	K562	blood:
37	chr6:34611223..34612801-chr6:34622555..34624943,2	K562	blood:
38	chr6:34636358..34637943-chr6:34638203..34639781,2	K562	blood:
39	chr6:34650628..34652210-chr6:34652248..34655112,2	K562	blood:
40	chr6:34662945..34666396-chr6:34758284..34762755,7	K562	blood:
41	chr6:34663461..34666396-chr6:34758437..34761219,3	K562	blood:
42	chr6:34671316..34674801-chr6:34727062..34730590,3	K562	blood:
43	chr6:34360143..34362541-chr6:34575968..34579068,3	K562	blood:
44	chr6:34645325..34647678-chr6:34648447..34651141,2	K562	blood:
45	chr6:34627370..34633298-chr6:34660858..34665853,8	K562	blood:
46	chr6:34649586..34652220-chr6:34663564..34665833,2	MCF-7	breast:
47	chr6:34639252..34641704-chr6:34648806..34650396,2	K562	blood:
48	chr6:34131703..34132237-chr6:34577100..34577997,4	K562	blood:
49	chr6:34625394..34627775-chr6:34723853..34725702,2	K562	blood:
50	chr6:34672410..34673961-chr6:34856046..34857679,2	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1
2	lnc-SNRPC-3	chr6:34654379-34654460	NONHSAT112143
3	lnc-SNRPC-2	chr6:34664723-34664774	NONHSAT112145
4	lnc-SNRPC-2	chr6:34664722-34664774	ENSG00000272288.1
5	lnc-SNRPC-2	chr6:34664936-34665247	ENSG00000272288.1
6	lnc-SNRPC-2	chr6:34664936-34665339	NONHSAT112145
7	lnc-SNRPC-2	chr6:34664094-34664499	ENSG00000272288.1
8	lnc-PACSIN1-2	chr6:34584315-34585035	NONHSAT112140
9	lnc-SNRPC-3	chr6:34654686-34654883	NONHSAT112143
10	lnc-SPDEF-1	chr6:34653134-34653419	NONHSAT112142

No data

Variant related genes	Relation type
C6orf106	TF binding region
ENSG00000272288	TF binding region
RN7SL200P	TF binding region
RPL7P25	TF binding region
ENSG00000239059	TF binding region
ENSG00000220643	TF binding region
ENSG00000238484	TF binding region
C6orf106	CpG island
ENSG00000272288	CpG island
RN7SL200P	CpG island
RPL7P25	CpG island
ENSG00000239059	CpG island
ENSG00000220643	CpG island
ENSG00000238484	CpG island
ENSG00000124507	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000272325	chromatin interactions
ENSG00000265123	chromatin interactions
ENSG00000065060	chromatin interactions
ENSG00000220643	chromatin interactions
ENSG00000124562	chromatin interactions
ENSG00000186577	chromatin interactions
ENSG00000124493	chromatin interactions
ENSG00000124614	chromatin interactions
ENSG00000216636	chromatin interactions
ENSG00000172757	chromatin interactions
ENSG00000064995	chromatin interactions
ENSG00000064999	chromatin interactions
ENSG00000124664	chromatin interactions
ENSG00000270800	chromatin interactions
ENSG00000137309	chromatin interactions
ENSG00000196821	chromatin interactions
ENSG00000272288	chromatin interactions
ENSG00000239059	chromatin interactions
ENSG00000238484	chromatin interactions

Extended variants
information (count: 4250 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:4250 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs205265	chr6:34561585-34561586	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs114325894	chr6:34561587-34561588	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs369762521	chr6:34561594-34561595	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs150560349	chr6:34561620-34561621	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs570876022	chr6:34561642-34561643	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs193142724	chr6:34561713-34561714	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs547106713	chr6:34561720-34561721	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs184822813	chr6:34561722-34561723	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs536195017	chr6:34561723-34561724	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs554748677	chr6:34561729-34561730	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs139804407	chr6:34561755-34561756	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs538305544	chr6:34561771-34561772	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs117425893	chr6:34561825-34561826	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs539046130	chr6:34561830-34561831	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs578162241	chr6:34561836-34561837	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs552737235	chr6:34561840-34561841	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs188365572	chr6:34561866-34561867	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs572857638	chr6:34561875-34561876	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs572694489	chr6:34561976-34561977	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs191288788	chr6:34562005-34562006	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs561491044	chr6:34562008-34562009	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs531803569	chr6:34562037-34562038	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs145715990	chr6:34562098-34562099	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs139824986	chr6:34562177-34562178	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs532111818	chr6:34562191-34562192	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs205264	chr6:34562196-34562197	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs184207150	chr6:34562224-34562225	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs189375679	chr6:34562230-34562231	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs76935105	chr6:34562275-34562276	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs569835615	chr6:34562321-34562322	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs181315150	chr6:34562450-34562451	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs2235572	chr6:34562453-34562454	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs145665091	chr6:34562478-34562479	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs368995761	chr6:34562489-34562490	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs205263	chr6:34562523-34562524	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs554088318	chr6:34562526-34562527	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs572358181	chr6:34562591-34562592	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs543270740	chr6:34562601-34562602	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs34908681	chr6:34562664-34562665	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs2235571	chr6:34562677-34562678	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs190170583	chr6:34562696-34562697	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs147757378	chr6:34562716-34562717	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs182237728	chr6:34562734-34562735	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs532077012	chr6:34562740-34562741	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs540774430	chr6:34562777-34562778	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs573126570	chr6:34562786-34562787	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs559264198	chr6:34562820-34562821	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs540623003	chr6:34562849-34562850	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs529675089	chr6:34562884-34562885	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs186152883	chr6:34562962-34562963	Weak transcription Enhancers Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Melanoma	18172304	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Hepatocellular carcinoma	16750200	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Systemic lupus erythematosus	19279649	CNVD
Retinoblastoma	16790693	CNVD
Acute myocardial infarction	18032375	CNVD
Renal cell carcinoma	19150565	CNVD
Systemic lupus erythematosus	19591781	CNVD
Attention deficit hyperactivity disorder	19287146	CNVD
Autism	19287146	CNVD
Erythema nodosum in leprosy	19287146	CNVD
Henoch-schoenlein purpura	19287146	CNVD
Liver cirrhosis	19287146	CNVD
Systemic lupus erythematosus	19287146	CNVD
Autoimmune disease	19135723	CNVD
Congenital adrenal hyperplasia	18478071	CNVD
Systemic lupus erythematosus	19287147	CNVD
Osteosarcoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
Liver carcinoma	19366792	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Ovarian clear cell carcinoma	21343371	CNVD

Chromatin state (count:4077 , 50 per page) page: 1 2 3 4 5 6 7 ... 82

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:34535600-34563200	Weak transcription	A549	lung
2	chr6:34547200-34566800	Weak transcription	Aorta	Aorta
3	chr6:34549000-34564200	Strong transcription	Fetal Intestine Small	intestine
4	chr6:34549400-34564400	Weak transcription	Brain Substantia Nigra	brain
5	chr6:34549800-34564200	Strong transcription	Fetal Stomach	stomach
6	chr6:34553400-34562200	Weak transcription	Small Intestine	intestine
7	chr6:34553400-34570000	Weak transcription	NH-A	brain
8	chr6:34553600-34566400	Weak transcription	Brain Germinal Matrix	brain
9	chr6:34553800-34562800	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr6:34554000-34573600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
11	chr6:34554200-34563000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:34554600-34577200	Weak transcription	HUVEC	blood vessel
13	chr6:34555400-34574200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:34555600-34569200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr6:34555800-34565400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr6:34556000-34562200	Weak transcription	Pancreas	Pancrea
17	chr6:34556000-34563800	Weak transcription	Stomach Mucosa	stomach
18	chr6:34556200-34563000	Weak transcription	HMEC	breast
19	chr6:34556200-34612200	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr6:34556400-34563600	Weak transcription	Gastric	stomach
21	chr6:34557200-34573600	Weak transcription	Colonic Mucosa	Colon
22	chr6:34557400-34565000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr6:34557400-34612400	Weak transcription	Fetal Kidney	kidney
24	chr6:34557600-34562200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr6:34557600-34562800	Weak transcription	NHLF	lung
26	chr6:34557600-34563600	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr6:34557600-34563600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr6:34557600-34565200	Weak transcription	Sigmoid Colon	Sigmoid Colon
29	chr6:34557600-34565600	Weak transcription	HUES64 Cell Line	embryonic stem cell
30	chr6:34557600-34566600	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr6:34557600-34567200	Weak transcription	Rectal Smooth Muscle	rectum
32	chr6:34557600-34569000	Weak transcription	H1 Cell Line	embryonic stem cell
33	chr6:34557600-34569200	Weak transcription	Duodenum Mucosa	Duodenum
34	chr6:34557600-34569600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr6:34557600-34569600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr6:34557600-34573200	Weak transcription	Spleen	Spleen
37	chr6:34557600-34573400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
38	chr6:34557800-34562400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr6:34557800-34562800	Weak transcription	Osteobl	bone
40	chr6:34557800-34563000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr6:34557800-34564400	Weak transcription	Brain Hippocampus Middle	brain
42	chr6:34557800-34565200	Weak transcription	Esophagus	oesophagus
43	chr6:34557800-34565800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr6:34557800-34566000	Weak transcription	Fetal Lung	lung
45	chr6:34557800-34566400	Weak transcription	Stomach Smooth Muscle	stomach
46	chr6:34558000-34561600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr6:34558000-34563600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
48	chr6:34558000-34568600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr6:34558000-34570000	Weak transcription	Fetal Intestine Large	intestine
50	chr6:34558000-34573400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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