Variant report

Variant nsv885904
Chromosome Location chr6:55156812-55344782
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:150 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:55157800-55159000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr6:55164200-55164800 Enhancers Fetal Heart heart
3 chr6:55164200-55165000 Enhancers Fetal Lung lung
4 chr6:55164400-55164800 Enhancers Gastric stomach
5 chr6:55164800-55165600 Enhancers Fetal Brain Male brain
6 chr6:55164800-55167400 Weak transcription Fetal Heart heart
7 chr6:55184800-55185400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr6:55184800-55185600 Enhancers Fetal Heart heart
9 chr6:55184800-55185800 Enhancers Placenta Amnion Placenta Amnion
10 chr6:55185000-55185200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:55185200-55185600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:55185600-55186000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr6:55192000-55192400 Active TSS Adipose Nuclei Adipose
14 chr6:55205400-55206200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
15 chr6:55217800-55218200 Enhancers Fetal Heart heart
16 chr6:55233800-55234400 Active TSS ES-I3 Cell Line embryonic stem cell
17 chr6:55234000-55234200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr6:55234000-55234400 Active TSS HUES6 Cell Line embryonic stem cell
19 chr6:55234000-55234400 Active TSS iPS-15b Cell Line embryonic stem cell
20 chr6:55234600-55235000 Enhancers Spleen Spleen
21 chr6:55235000-55235400 Weak transcription Spleen Spleen
22 chr6:55235400-55235800 Enhancers Spleen Spleen
23 chr6:55248400-55248600 Enhancers Fetal Lung lung
24 chr6:55248600-55249600 Weak transcription Fetal Lung lung
25 chr6:55249600-55250200 Enhancers Fetal Lung lung
26 chr6:55252800-55253200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr6:55253600-55254000 Enhancers iPS-15b Cell Line embryonic stem cell
28 chr6:55254000-55254400 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr6:55254400-55255000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr6:55254400-55255000 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr6:55260600-55261000 Enhancers Colon Smooth Muscle Colon
32 chr6:55260600-55261000 Enhancers Fetal Heart heart
33 chr6:55260600-55261000 Enhancers Pancreatic Islets Pancreatic Islet
34 chr6:55260600-55261200 Enhancers Duodenum Smooth Muscle Duodenum
35 chr6:55261000-55262400 Weak transcription Fetal Heart heart
36 chr6:55262400-55263000 Enhancers Fetal Heart heart
37 chr6:55262400-55263200 Enhancers Fetal Stomach stomach
38 chr6:55263200-55269800 Weak transcription Fetal Stomach stomach
39 chr6:55263400-55263600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr6:55264400-55264600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr6:55268200-55268400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:55268400-55268800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr6:55269800-55270000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr6:55269800-55270800 Enhancers Fetal Stomach stomach
45 chr6:55270200-55271000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:55270200-55271200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr6:55270400-55271400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr6:55279600-55280400 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr6:55279800-55280200 Enhancers HUES64 Cell Line embryonic stem cell
50 chr6:55279800-55280200 Enhancers iPS-20b Cell Line embryonic stem cell

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