Variant report

Variant nsv885938
Chromosome Location chr6:57553898-58144557
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:275 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:57553800-57557800 ZNF genes & repeats Adipose Nuclei Adipose
2 chr6:57554000-57557600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
3 chr6:57554200-57556000 ZNF genes & repeats Fetal Brain Male brain
4 chr6:57554200-57556600 ZNF genes & repeats Duodenum Mucosa Duodenum
5 chr6:57554600-57556400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
6 chr6:57554800-57555000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr6:57554800-57557800 ZNF genes & repeats Liver Liver
8 chr6:57555400-57556400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
9 chr6:57555600-57556600 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
10 chr6:57555800-57557800 ZNF genes & repeats Aorta Aorta
11 chr6:57557800-57558400 Weak transcription Aorta Aorta
12 chr6:57558400-57558800 Active TSS Aorta Aorta
13 chr6:57562200-57562400 ZNF genes & repeats Fetal Heart heart
14 chr6:57562200-57563000 ZNF genes & repeats Aorta Aorta
15 chr6:57562400-57562600 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
16 chr6:57566400-57567800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr6:57566400-57568000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
18 chr6:57566600-57566800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:57567200-57567600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
20 chr6:57573800-57574200 ZNF genes & repeats Fetal Heart heart
21 chr6:57574000-57575000 ZNF genes & repeats Aorta Aorta
22 chr6:57574200-57575000 Active TSS Fetal Heart heart
23 chr6:57574600-57575800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
24 chr6:57574800-57575200 Enhancers NHDF-Ad bronchial
25 chr6:57574800-57575200 Enhancers Osteobl bone
26 chr6:57574800-57575400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:57574800-57575800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:57579600-57580200 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:57579800-57580200 ZNF genes & repeats Psoas Muscle Psoas
30 chr6:57580600-57582200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr6:57582200-57582800 Strong transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr6:57582800-57590600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr6:57590600-57590800 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr6:57594200-57594400 ZNF genes & repeats Psoas Muscle Psoas
35 chr6:57596600-57597000 Active TSS Aorta Aorta
36 chr6:57604000-57604400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
37 chr6:57606200-57606400 ZNF genes & repeats H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr6:57606400-57616600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr6:57607200-57611400 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr6:57614000-57614600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr6:57614400-57615200 Enhancers HUES64 Cell Line embryonic stem cell
42 chr6:57634000-57637800 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr6:57635400-57635600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
44 chr6:57635600-57642400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr6:57635800-57636200 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
46 chr6:57636200-57637200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr6:57636800-57641800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr6:57637200-57640400 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr6:57637400-57638600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr6:57637600-57640200 Enhancers iPS-20b Cell Line embryonic stem cell

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