Variant report

Variant	nsv885971
Chromosome Location	chr6:63241352-63605221
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:63600979-63601266	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:63485401-63485684	HepG2	liver:	n/a	n/a
3	BACH1	chr6:63275845-63276042	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr6:63343076-63343099	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr6:63476348-63476567	GM12878	blood:	n/a	n/a
6	BCL11A	chr6:63261207-63261405	GM12878	blood:	n/a	n/a
7	BRCA1	chr6:63297856-63298053	H1-hESC	embryonic stem cell:	n/a	n/a
8	CBX3	chr6:63362575-63362854	K562	blood:	n/a	n/a
9	CBX3	chr6:63362595-63362988	HCT-116	colon:	n/a	n/a
10	CBX3	chr6:63362679-63362919	K562	blood:	n/a	n/a
11	CCNT2	chr6:63244049-63244248	K562	blood:	n/a	n/a
12	CEBPB	chr6:63525042-63525285	HepG2	liver:	n/a	chr6:63525158-63525169
13	CEBPB	chr6:63350553-63351067	A549	lung:	n/a	chr6:63350634-63350645
14	CEBPB	chr6:63377486-63377807	HepG2	liver:	n/a	chr6:63377653-63377664
15	CEBPB	chr6:63512982-63513172	H1-hESC	embryonic stem cell:	n/a	chr6:63513016-63513027
16	CEBPB	chr6:63512957-63513198	IMR90	lung:	n/a	chr6:63513016-63513027
17	CEBPB	chr6:63476559-63476780	HepG2	liver:	n/a	chr6:63476688-63476699
18	CEBPB	chr6:63311156-63311399	A549	lung:	n/a	n/a
19	CEBPB	chr6:63479626-63479944	HepG2	liver:	n/a	chr6:63479783-63479794
20	CEBPB	chr6:63326560-63326798	MCF-7	breast:	n/a	chr6:63326660-63326671
21	CEBPB	chr6:63512795-63513283	MCF-7	breast:	n/a	chr6:63513016-63513027
22	CEBPB	chr6:63517862-63517964	K562	blood:	n/a	chr6:63517900-63517913 chr6:63517900-63517911
23	CEBPB	chr6:63311181-63311407	MCF-7	breast:	n/a	n/a
24	CEBPB	chr6:63316649-63316921	HepG2	liver:	n/a	n/a
25	CEBPB	chr6:63350334-63350675	HepG2	liver:	n/a	chr6:63350634-63350645 chr6:63350477-63350488 chr6:63350476-63350489
26	CEBPB	chr6:63554061-63554290	A549	lung:	n/a	n/a
27	CEBPB	chr6:63326531-63326747	HepG2	liver:	n/a	chr6:63326660-63326671
28	CEBPB	chr6:63520524-63520675	H1-hESC	embryonic stem cell:	n/a	n/a
29	CEBPB	chr6:63517820-63517987	HepG2	liver:	n/a	chr6:63517900-63517913 chr6:63517900-63517911
30	CEBPB	chr6:63326483-63326806	MCF-7	breast:	n/a	chr6:63326660-63326671
31	CEBPB	chr6:63541693-63541860	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr6:63512841-63513198	HepG2	liver:	n/a	chr6:63513016-63513027
33	CEBPB	chr6:63571959-63572191	HepG2	liver:	n/a	chr6:63572068-63572079
34	CEBPB	chr6:63486528-63486800	HepG2	liver:	n/a	n/a
35	CEBPZ	chr6:63362626-63362905	HepG2	liver:	n/a	n/a
36	CHD1	chr6:63347777-63347984	H1-hESC	embryonic stem cell:	n/a	n/a
37	CHD1	chr6:63297860-63298054	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD2	chr6:63576492-63576565	GM12878	blood:	n/a	n/a
39	CHD2	chr6:63457023-63457040	GM12878	blood:	n/a	n/a
40	CTCF	chr6:63601060-63601210	SAEC	small airway:	n/a	chr6:63601151-63601164 chr6:63601144-63601165 chr6:63601152-63601162 chr6:63601149-63601167 chr6:63601150-63601166 chr6:63601155-63601164
41	CTCF	chr6:63601080-63601230	HMF	breast:	n/a	chr6:63601151-63601164 chr6:63601144-63601165 chr6:63601152-63601162 chr6:63601149-63601167 chr6:63601150-63601166 chr6:63601155-63601164
42	CTCF	chr6:63324400-63324550	BE2_C	brain:	n/a	n/a
43	CTCF	chr6:63601080-63601230	GM12875	blood:	n/a	chr6:63601151-63601164 chr6:63601144-63601165 chr6:63601152-63601162 chr6:63601149-63601167 chr6:63601150-63601166 chr6:63601155-63601164
44	CTCF	chr6:63601180-63601330	BE2_C	brain:	n/a	n/a
45	CTCF	chr6:63417180-63417330	GM12874	blood:	n/a	n/a
46	CTCF	chr6:63485420-63485570	HEK293	kidney:	n/a	chr6:63485525-63485541 chr6:63485526-63485539 chr6:63485524-63485542 chr6:63485519-63485540 chr6:63485530-63485539
47	CTCF	chr6:63417120-63417270	BE2_C	brain:	n/a	n/a
48	CTCF	chr6:63450100-63450250	GM12868	blood:	n/a	n/a
49	CTCF	chr6:63601072-63601248	GM12878	blood:	n/a	chr6:63601151-63601164 chr6:63601144-63601165 chr6:63601152-63601162 chr6:63601149-63601167 chr6:63601150-63601166 chr6:63601155-63601164
50	CTCF	chr6:63601340-63601490	AG10803	skin:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:63553696-63553746	BJ	skin:	n/a
2	chr6:63572411-63572461	HCPEpiC	choroid plexus:	n/a
3	chr6:63553696-63553746	BJ	skin:	n/a
4	chr6:63572411-63572461	HCPEpiC	choroid plexus:	n/a
5	chr6:63553575-63553625	BJ	skin:	n/a
6	chr6:63553696-63553746	HPAEpiC	pulmonary alveolar:	n/a
7	chr6:63553575-63553625	ovcar-3	ovarian:	n/a
8	chr6:63553696-63553746	ProgFib	skin:	n/a
9	chr6:63553575-63553625	PFSK-1	brain:	n/a
10	chr6:63553575-63553625	IMR90	lung:	fetal
11	chr6:63553575-63553625	NT2-D1	testis:	n/a
12	chr6:63572411-63572461	CMK	blood:	n/a
13	chr6:63553575-63553625	HCF	heart:	n/a
14	chr6:63553696-63553746	GM19239	blood:	n/a
15	chr6:63553575-63553625	NH-A	brain:	n/a
16	chr6:63553696-63553746	LNCaP	prostate:	n/a
17	chr6:63553696-63553746	MCF10A-Er-Src	breast:	n/a
18	chr6:63572411-63572461	ProgFib	skin:	n/a
19	chr6:63553575-63553625	RPTEC	kidney:	n/a
20	chr6:63553696-63553746	MCF-7	breast:	n/a
21	chr6:63572411-63572461	GM12892	blood:	n/a
22	chr6:63553575-63553625	SAEC	small airway:	n/a
23	chr6:63572411-63572461	GM06990	blood:	n/a
24	chr6:63553696-63553746	NH-A	brain:	n/a
25	chr6:63553696-63553746	NB4	blood:	n/a
26	chr6:63553696-63553746	Hela-S3	cervix:	n/a
27	chr6:63553575-63553625	LNCaP	prostate:	n/a
28	chr6:63553696-63553746	GM06990	blood:	n/a
29	chr6:63553575-63553625	HEK293	kidney:	embryo
30	chr6:63572411-63572461	Hepatocyte	liver:	n/a
31	chr6:63572411-63572461	H1-hESC	embryonic stem cell:	embryo
32	chr6:63553696-63553746	NHDF-neo	bronchial:	n/a
33	chr6:63553696-63553746	HCPEpiC	choroid plexus:	n/a
34	chr6:63553696-63553746	SK-N-MC	brain:	n/a
35	chr6:63553696-63553746	IMR90	lung:	fetal
36	chr6:63553696-63553746	GM12892	blood:	n/a
37	chr6:63572411-63572461	HCT-116	colon:	n/a
38	chr6:63553575-63553625	HIPEpiC	eye:	n/a
39	chr6:63553575-63553625	HRE	kidney:	n/a
40	chr6:63553696-63553746	HUVEC	blood vessel:	n/a
41	chr6:63572411-63572461	AG09309	skin:	n/a
42	chr6:63553696-63553746	K562	blood:	n/a
43	chr6:63553696-63553746	SK-N-SH	brain:	n/a
44	chr6:63572411-63572461	HPAEpiC	pulmonary alveolar:	n/a
45	chr6:63553575-63553625	GM19239	blood:	n/a
46	chr6:63553696-63553746	GM12878	blood:	n/a
47	chr6:63572411-63572461	SAEC	small airway:	n/a
48	chr6:63572411-63572461	HRE	kidney:	n/a
49	chr6:63553575-63553625	HCT-116	colon:	n/a
50	chr6:63572411-63572461	HCF	heart:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:63601380..63602369-chr6:63983063..63983726,2	MCF-7	breast:
2	chr6:62518549..62519303-chr6:63600674..63601315,2	MCF-7	breast:
3	chr17:41400811..41402656-chr6:63530253..63531773,2	MCF-7	breast:
4	chr22:19006105..19008372-chr6:63457723..63459244,2	K562	blood:
5	chr6:63514284..63517012-chr6:63519494..63521413,2	MCF-7	breast:
6	chr17:41399298..41401661-chr6:63530253..63531773,2	K562	blood:
7	chr6:63441335..63443879-chr6:63445998..63448155,2	K562	blood:
8	chr1:28560124..28560625-chr6:63259614..63260114,2	NB4	blood:
9	chr6:63381016..63382588-chr6:63383396..63385763,2	K562	blood:
10	chr17:41466229..41468054-chr6:63528754..63531753,2	K562	blood:
11	chr17:41400213..41402082-chr6:63530273..63531773,2	MCF-7	breast:
12	chr6:63514284..63517012-chr6:63519494..63521413,2	MCF-7	breast:
13	chr1:17229945..17231648-chr6:63349079..63350580,2	MCF-7	breast:
14	chr17:41465690..41468054-chr6:63528753..63530254,3	MCF-7	breast:
15	chr6:63278592..63281366-chr6:63283322..63285509,2	MCF-7	breast:
16	chr17:41400161..41402651-chr6:63528753..63531753,3	K562	blood:
17	chr6:63381016..63382588-chr6:63383396..63385763,2	K562	blood:
18	chr17:41466567..41467237-chr6:63529754..63530273,2	NB4	blood:
19	chr6:63441335..63443879-chr6:63445998..63448155,2	K562	blood:
20	chr6:63278592..63281366-chr6:63283322..63285509,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FKBP1C-2	chr6:63257332-63257472	NONHSAT113334
2	lnc-FKBP1C-2	chr6:63257927-63258177	NONHSAT113334
3	lnc-KHDRBS2-3	chr6:63297418-63297607	NONHSAT113335
4	lnc-KHDRBS2-3	chr6:63298023-63298059	NONHSAT113335

Variant related genes	Relation type
ENSG00000264410	TF binding region
ENSG00000216072	TF binding region
ENSG00000217067	TF binding region
ENSG00000262566	TF binding region
ENSG00000264410	CpG island
ENSG00000216072	CpG island
ENSG00000217067	CpG island
ENSG00000262566	CpG island
ENSG00000270393	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000272426	chromatin interactions

Extended variants
information (count: 10750 )
Associated
traits (count: 81 )

Variant overlapped rSNPs/rCNVs (count:10750 , 50 per page) page: 1 2 3 4 5 6 7 ... 215

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs36137874	chr6:63242803-63242804	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs578065099	chr6:63242810-63242811	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs538695064	chr6:63242820-63242821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs200445474	chr6:63242839-63242840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs10805953	chr6:63242845-63242846	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs532609157	chr6:63242856-63242857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs9360530	chr6:63242866-63242867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs373960917	chr6:63242932-63242933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs10942996	chr6:63242939-63242940	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs9766774	chr6:63243025-63243026	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs10942997	chr6:63243028-63243029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs12154094	chr6:63243095-63243096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200967416	chr6:63243099-63243100	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs377157468	chr6:63243169-63243170	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs369013686	chr6:63243233-63243234	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs576264518	chr6:63243244-63243245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs6941326	chr6:63243246-63243247	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs543093243	chr6:63243265-63243266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs377009328	chr6:63243290-63243291	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs564686501	chr6:63243326-63243327	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs532124330	chr6:63243327-63243328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs12194409	chr6:63243333-63243334	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs559569769	chr6:63243412-63243413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs529959235	chr6:63243417-63243418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs12202793	chr6:63243422-63243423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs182641061	chr6:63243425-63243426	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs188786230	chr6:63243430-63243431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs569474628	chr6:63243434-63243435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs4382228	chr6:63243454-63243455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs4257840	chr6:63243455-63243456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs571656365	chr6:63243477-63243478	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs538979237	chr6:63243529-63243530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs553902903	chr6:63243541-63243542	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs572666523	chr6:63243570-63243571	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs536533694	chr6:63243572-63243573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs4615369	chr6:63243596-63243597	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs549037861	chr6:63243612-63243613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs576225776	chr6:63243638-63243639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs543650130	chr6:63243691-63243692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs564591419	chr6:63243783-63243784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs576885967	chr6:63243829-63243830	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs540986440	chr6:63243838-63243839	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs367861716	chr6:63243850-63243851	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs529718989	chr6:63243856-63243857	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs548498119	chr6:63243858-63243859	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs563612207	chr6:63243859-63243860	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs530679843	chr6:63243867-63243868	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs139817568	chr6:63243870-63243871	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs571689285	chr6:63243886-63243887	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs4615370	chr6:63243889-63243890	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:81)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Schizophrenia	23813976	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Prostate cancer	16573809	CNVD
Ovarian cancer	19835627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16272173	CNVD
Developmental delay	21147756	CNVD

Chromatin state (count:319 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:63242800-63243800	Weak transcription	Pancreas	Pancrea
2	chr6:63243800-63244200	ZNF genes & repeats	Pancreas	Pancrea
3	chr6:63244200-63244600	Weak transcription	Pancreas	Pancrea
4	chr6:63253000-63253400	Enhancers	Fetal Brain Male	brain
5	chr6:63253400-63253800	Weak transcription	Fetal Brain Male	brain
6	chr6:63253800-63254400	Enhancers	Fetal Brain Male	brain
7	chr6:63279600-63281200	Enhancers	Primary B cells from peripheral blood	blood
8	chr6:63279800-63280000	Enhancers	Primary B cells from cord blood	blood
9	chr6:63280000-63280400	Flanking Active TSS	Primary B cells from cord blood	blood
10	chr6:63280400-63281400	Enhancers	Primary B cells from cord blood	blood
11	chr6:63293200-63294200	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr6:63293400-63293800	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr6:63293400-63294400	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr6:63293800-63294000	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr6:63293800-63294400	Enhancers	HUES48 Cell Line	embryonic stem cell
16	chr6:63293800-63297800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr6:63294400-63297800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr6:63295200-63297800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
19	chr6:63297800-63298000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr6:63297800-63298000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr6:63297800-63298000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
22	chr6:63297800-63298000	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
23	chr6:63297800-63298000	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
24	chr6:63297800-63298000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
25	chr6:63297800-63298000	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
26	chr6:63297800-63298000	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
27	chr6:63297800-63298000	Active TSS	Primary T helper naive cells fromperipheralblood	blood
28	chr6:63297800-63298000	Active TSS	Primary T helper cells PMA-I stimulated	--
29	chr6:63297800-63298000	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
30	chr6:63297800-63298000	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
31	chr6:63297800-63298000	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
32	chr6:63297800-63298000	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
33	chr6:63297800-63298000	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
34	chr6:63297800-63298000	ZNF genes & repeats	Colon Smooth Muscle	Colon
35	chr6:63297800-63298000	ZNF genes & repeats	Gastric	stomach
36	chr6:63297800-63298000	ZNF genes & repeats	Stomach Mucosa	stomach
37	chr6:63297800-63298200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
38	chr6:63297800-63298200	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
39	chr6:63298000-63304800	Weak transcription	Gastric	stomach
40	chr6:63298200-63298800	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr6:63298200-63301000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
42	chr6:63301000-63301200	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr6:63318600-63319600	Enhancers	ES-I3 Cell Line	embryonic stem cell
44	chr6:63318800-63319600	Enhancers	HUES64 Cell Line	embryonic stem cell
45	chr6:63318800-63320000	Enhancers	HUES48 Cell Line	embryonic stem cell
46	chr6:63319000-63319400	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr6:63319000-63319800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
48	chr6:63319200-63319400	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr6:63319400-63319600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
50	chr6:63319400-63319800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links