Variant report

Variant	nsv886186
Chromosome Location	chr6:76328955-76469115
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1204)
CpG islands
(count:550)
Chromatin interactive
region (count:142)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1204 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:76331504-76331869	K562	blood:	n/a	n/a
2	ARID3A	chr6:76339500-76339892	K562	blood:	n/a	n/a
3	ARID3A	chr6:76458622-76458651	K562	blood:	n/a	n/a
4	ARID3A	chr6:76342477-76343204	K562	blood:	n/a	chr6:76342662-76342678
5	ARID3A	chr6:76445315-76446019	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:76457201-76457496	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:76383585-76383961	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:76337921-76337975	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:76458528-76458682	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:76333004-76333194	K562	blood:	n/a	n/a
11	ATF1	chr6:76342790-76343022	K562	blood:	n/a	n/a
12	ATF3	chr6:76400719-76401129	HCT-116	colon:	n/a	n/a
13	BACH1	chr6:76458435-76458631	K562	blood:	n/a	n/a
14	BACH1	chr6:76458387-76458719	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr6:76459213-76459671	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr6:76407134-76407232	K562	blood:	n/a	n/a
17	BATF	chr6:76453741-76453966	GM12878	blood:	n/a	n/a
18	BATF	chr6:76468871-76469148	GM12878	blood:	n/a	chr6:76468983-76468994
19	BCL11A	chr6:76453680-76454055	GM12878	blood:	n/a	n/a
20	BCL11A	chr6:76453638-76454028	GM12878	blood:	n/a	n/a
21	BHLHE40	chr6:76463942-76463968	GM12878	blood:	n/a	n/a
22	BHLHE40	chr6:76458636-76459067	K562	blood:	n/a	chr6:76459001-76459017
23	BHLHE40	chr6:76458636-76459158	GM12878	blood:	n/a	chr6:76459001-76459017
24	BHLHE40	chr6:76452022-76452184	HepG2	liver:	n/a	chr6:76452041-76452057
25	BHLHE40	chr6:76397729-76398031	K562	blood:	n/a	n/a
26	BHLHE40	chr6:76463949-76464065	HepG2	liver:	n/a	n/a
27	BRCA1	chr6:76331729-76331799	Hela-S3	cervix:	n/a	n/a
28	BRCA1	chr6:76458481-76458684	H1-hESC	embryonic stem cell:	n/a	n/a
29	BRCA1	chr6:76458548-76459230	Hela-S3	cervix:	n/a	n/a
30	CBX3	chr6:76463601-76464204	HCT-116	colon:	n/a	n/a
31	CCNT2	chr6:76342926-76343181	K562	blood:	n/a	n/a
32	CCNT2	chr6:76339667-76339842	K562	blood:	n/a	n/a
33	CCNT2	chr6:76458398-76459210	K562	blood:	n/a	n/a
34	CEBPB	chr6:76383646-76383968	ECC-1	luminal epithelium:	n/a	n/a
35	CEBPB	chr6:76383586-76384024	Hela-S3	cervix:	n/a	n/a
36	CEBPB	chr6:76400814-76401136	ECC-1	luminal epithelium:	n/a	chr6:76400914-76400925
37	CEBPB	chr6:76458453-76458653	K562	blood:	n/a	n/a
38	CEBPB	chr6:76383590-76384030	HepG2	liver:	n/a	n/a
39	CEBPB	chr6:76403222-76403604	MCF-7	breast:	n/a	chr6:76403486-76403499
40	CEBPB	chr6:76400858-76401116	ECC-1	luminal epithelium:	n/a	chr6:76400914-76400925
41	CEBPB	chr6:76445244-76446080	HCT-116	colon:	n/a	chr6:76445651-76445662 chr6:76445652-76445664
42	CEBPB	chr6:76401962-76402326	MCF-7	breast:	n/a	chr6:76402141-76402152
43	CEBPB	chr6:76400745-76401104	K562	blood:	n/a	chr6:76400914-76400925
44	CEBPB	chr6:76400838-76401046	H1-hESC	embryonic stem cell:	n/a	chr6:76400914-76400925
45	CEBPB	chr6:76396873-76397089	K562	blood:	n/a	n/a
46	CEBPB	chr6:76383701-76383950	K562	blood:	n/a	n/a
47	CEBPB	chr6:76401984-76402296	HepG2	liver:	n/a	chr6:76402141-76402152
48	CEBPB	chr6:76400734-76401054	K562	blood:	n/a	chr6:76400914-76400925
49	CEBPB	chr6:76334777-76334982	MCF-7	breast:	n/a	chr6:76334883-76334894
50	CEBPB	chr6:76403299-76403704	MCF-7	breast:	n/a	chr6:76403486-76403499

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:76425457-76425507	HAEpiC	amniotic membrane:	n/a
2	chr6:76425457-76425507	HAEpiC	amniotic membrane:	n/a
3	chr6:76330505-76330555	PFSK-1	brain:	n/a
4	chr6:76341733-76341783	PFSK-1	brain:	n/a
5	chr6:76341733-76341783	NB4	blood:	n/a
6	chr6:76456187-76456237	PANC-1	pancreas:	n/a
7	chr6:76341733-76341783	HUVEC	blood vessel:	n/a
8	chr6:76458633-76458683	GM06990	blood:	n/a
9	chr6:76330505-76330555	GM12892	blood:	n/a
10	chr6:76459077-76459127	Jurkat	blood:	n/a
11	chr6:76459511-76459561	PFSK-1	brain:	n/a
12	chr6:76459077-76459127	HCPEpiC	choroid plexus:	n/a
13	chr6:76458005-76458055	HUVEC	blood vessel:	n/a
14	chr6:76341733-76341783	PrEC	prostate:	n/a
15	chr6:76459511-76459561	RPTEC	kidney:	n/a
16	chr6:76461321-76461371	NT2-D1	testis:	n/a
17	chr6:76456187-76456237	MCF10A-Er-Src	breast:	n/a
18	chr6:76459511-76459561	BJ	skin:	n/a
19	chr6:76341733-76341783	HRE	kidney:	n/a
20	chr6:76330505-76330555	HCPEpiC	choroid plexus:	n/a
21	chr6:76461321-76461371	U87	brain:	n/a
22	chr6:76458005-76458055	GM19239	blood:	n/a
23	chr6:76458633-76458683	A549	lung:	n/a
24	chr6:76461321-76461371	AoSMC	blood vessel:	n/a
25	chr6:76459511-76459561	HNPCEpiC	eye:	n/a
26	chr6:76330505-76330555	Hepatocyte	liver:	n/a
27	chr6:76341733-76341783	AG09319	gingival:	n/a
28	chr6:76461321-76461371	HUVEC	blood vessel:	n/a
29	chr6:76425457-76425507	AG09309	skin:	n/a
30	chr6:76425457-76425507	SK-N-MC	brain:	n/a
31	chr6:76330505-76330555	GM19239	blood:	n/a
32	chr6:76461321-76461371	HIPEpiC	eye:	n/a
33	chr6:76458005-76458055	GM12891	blood:	n/a
34	chr6:76459077-76459127	GM12892	blood:	n/a
35	chr6:76459511-76459561	ovcar-3	ovarian:	n/a
36	chr6:76458005-76458055	LNCaP	prostate:	n/a
37	chr6:76458633-76458683	GM19239	blood:	n/a
38	chr6:76456187-76456237	AG10803	skin:	n/a
39	chr6:76458633-76458683	HUVEC	blood vessel:	n/a
40	chr6:76459077-76459127	LNCaP	prostate:	n/a
41	chr6:76461321-76461371	AG04449	skin:	fetal
42	chr6:76330505-76330555	HPAEpiC	pulmonary alveolar:	n/a
43	chr6:76425457-76425507	HCF	heart:	n/a
44	chr6:76459077-76459127	GM06990	blood:	n/a
45	chr6:76456187-76456237	GM12892	blood:	n/a
46	chr6:76425457-76425507	HNPCEpiC	eye:	n/a
47	chr6:76458005-76458055	HEK293	kidney:	embryo
48	chr6:76458005-76458055	HCT-116	colon:	n/a
49	chr6:76458005-76458055	AG10803	skin:	n/a
50	chr6:76341733-76341783	MCF10A-Er-Src	breast:	n/a

(count:142 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:76408144..76410485-chr6:76410972..76412755,2	MCF-7	breast:
2	chr6:76423467..76426296-chr6:76461021..76463732,3	MCF-7	breast:
3	chr6:76320486..76323287-chr6:76327522..76329955,3	K562	blood:
4	chr6:76346868..76349503-chr6:76350758..76352426,2	MCF-7	breast:
5	chr6:76338949..76341010-chr6:76342328..76344685,2	MCF-7	breast:
6	chr6:76359039..76361608-chr6:76376741..76379401,2	MCF-7	breast:
7	chr6:76465017..76467292-chr6:76472497..76474825,2	K562	blood:
8	chr6:76405218..76407618-chr6:76430939..76433858,2	MCF-7	breast:
9	chr6:76402073..76403999-chr6:76420565..76422699,2	MCF-7	breast:
10	chr6:76443894..76445853-chr6:76451155..76454793,3	MCF-7	breast:
11	chr6:76457614..76459414-chr6:76469003..76470756,2	K562	blood:
12	chr6:76320020..76322105-chr6:76423785..76425773,2	K562	blood:
13	chr6:76431586..76433985-chr6:76438066..76440225,2	MCF-7	breast:
14	chr6:76348163..76350859-chr6:76356641..76358719,2	K562	blood:
15	chr6:76386546..76388318-chr6:76399041..76401218,2	K562	blood:
16	chr6:76424657..76427289-chr6:76428050..76430901,3	MCF-7	breast:
17	chr6:76461303..76463860-chr6:76468925..76471220,2	K562	blood:
18	chr6:76423793..76426485-chr6:76434093..76435596,2	K562	blood:
19	chr6:76452171..76456681-chr6:76457096..76463079,8	MCF-7	breast:
20	chr6:76461303..76463860-chr6:76468925..76471220,2	K562	blood:
21	chr6:76384444..76386029-chr6:76458187..76459716,2	MCF-7	breast:
22	chr6:76397986..76399777-chr6:76458759..76460559,2	MCF-7	breast:
23	chr6:76311276..76313926-chr6:76328791..76332406,4	MCF-7	breast:
24	chr6:76329104..76331316-chr6:76370800..76373283,2	K562	blood:
25	chr6:76316110..76319023-chr6:76339771..76341687,2	K562	blood:
26	chr6:76405218..76407618-chr6:76430939..76433858,2	MCF-7	breast:
27	chr3:141205080..141206779-chr6:76458156..76460847,2	MCF-7	breast:
28	chr2:233562031..233562988-chr6:76458771..76459462,2	Hela-S3	cervix:
29	chr6:76413657..76415200-chr6:76420816..76423209,2	MCF-7	breast:
30	chr6:76363284..76364897-chr6:76389536..76391998,2	MCF-7	breast:
31	chr6:76423793..76426485-chr6:76434093..76435596,2	K562	blood:
32	chr6:76354799..76357581-chr6:76387845..76390206,2	K562	blood:
33	chr6:76415966..76418474-chr6:76457642..76460557,4	MCF-7	breast:
34	chr6:76327323..76329622-chr6:76330394..76331981,2	K562	blood:
35	chr6:76327323..76329622-chr6:76330394..76331981,2	K562	blood:
36	chr6:76354799..76357581-chr6:76387845..76390206,2	K562	blood:
37	chr6:76373474..76375579-chr6:76380760..76383330,2	K562	blood:
38	chr6:76458851..76461812-chr6:76463826..76465926,2	K562	blood:
39	chr6:76310717..76312305-chr6:76374454..76377244,2	K562	blood:
40	chr6:76446062..76448644-chr6:76456702..76459457,3	MCF-7	breast:
41	chr6:76402029..76404149-chr6:76408590..76410105,2	MCF-7	breast:
42	chr6:76443216..76445538-chr6:76460929..76463884,2	K562	blood:
43	chr6:76373474..76375579-chr6:76380760..76383330,2	K562	blood:
44	chr6:76416294..76419277-chr6:76420477..76423022,2	K562	blood:
45	chr6:76371815..76374314-chr6:76380785..76382399,2	MCF-7	breast:
46	chr6:76359388..76361142-chr6:76366344..76368393,2	K562	blood:
47	chr6:76416294..76419277-chr6:76420477..76423022,2	K562	blood:
48	chr6:76330148..76333811-chr6:76341672..76344273,3	K562	blood:
49	chr6:76460418..76462531-chr6:76558690..76560910,2	MCF-7	breast:
50	chr6:76366871..76369155-chr6:76374703..76377343,2	MCF-7	breast:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MYO6-1	chr6:76362140-76362390	ENSG00000249080
2	lnc-MYO6-7	chr6:76343366-76343442	NONHSAT113624
3	lnc-MYO6-6	chr6:76372937-76373221	NONHSAT113627
4	lnc-SENP6-5	chr6:76434955-76435356	NONHSAT113632
5	lnc-MYO6-1	chr6:76359931-76362040	ENSG00000249080
6	lnc-FILIP1-3	chr6:76364686-76365015	NONHSAT113628
7	lnc-MYO6-6	chr6:76357008-76357517	NONHSAT113627
8	lnc-SENP6-4	chr6:76433669-76434665	NONHSAT113631
9	lnc-MYO6-7	chr6:76344423-76344772	NONHSAT113624
10	lnc-MYO6-6	chr6:76368978-76369123	NONHSAT113627

No data

Variant related genes	Relation type
RN7SKP163	TF binding region
SENP6	TF binding region
MYO6	TF binding region
RNU6-1016P	TF binding region
RN7SKP163	CpG island
SENP6	CpG island
MYO6	CpG island
RNU6-1016P	CpG island
ENSG00000244265	chromatin interactions
ENSG00000204120	chromatin interactions
ENSG00000217488	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000181788	chromatin interactions
ENSG00000225793	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000112697	chromatin interactions
ENSG00000239132	chromatin interactions
ENSG00000223169	chromatin interactions
ENSG00000124596	chromatin interactions
ENSG00000196586	chromatin interactions
ENSG00000252498	chromatin interactions
ENSG00000112701	chromatin interactions
ENSG00000252156	chromatin interactions
ENSG00000143971	chromatin interactions
ENSG00000155903	chromatin interactions
ENSG00000001167	chromatin interactions
NR4A2	miRNA target sites
KRAS	miRNA target sites

Extended variants
information (count: 5200 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:5200 , 50 per page) page: 1 2 3 4 5 6 7 ... 104

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs619786	chr6:76328955-76328956	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs564061853	chr6:76328992-76328993	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs150339880	chr6:76329006-76329007	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs549575559	chr6:76329016-76329017	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs561909044	chr6:76329046-76329047	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs115842996	chr6:76329108-76329109	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs142903910	chr6:76329120-76329121	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs566786541	chr6:76329130-76329131	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs534197384	chr6:76329142-76329143	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs201637447	chr6:76329159-76329160	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs374466768	chr6:76329161-76329162	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs201758987	chr6:76329162-76329163	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs201263879	chr6:76329163-76329164	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs201832020	chr6:76329189-76329190	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs200035614	chr6:76329190-76329191	Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs191661133	chr6:76329203-76329204	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs184257181	chr6:76329232-76329233	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs556844735	chr6:76329252-76329253	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs376640031	chr6:76329273-76329274	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs574956310	chr6:76329289-76329290	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs79789158	chr6:76329298-76329299	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs561127566	chr6:76329300-76329301	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs73453058	chr6:76329366-76329367	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs545399325	chr6:76329371-76329372	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs187304031	chr6:76329379-76329380	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs573881076	chr6:76329414-76329415	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs192122880	chr6:76329417-76329418	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs543307635	chr6:76329436-76329437	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs549747295	chr6:76329445-76329446	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs146088954	chr6:76329463-76329464	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs185477887	chr6:76329473-76329474	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs540833739	chr6:76329479-76329480	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs527809150	chr6:76329515-76329516	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs560655142	chr6:76329570-76329571	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs527737262	chr6:76329584-76329585	Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs190205454	chr6:76329715-76329716	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs570354499	chr6:76329723-76329724	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs569981139	chr6:76329763-76329764	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs182434480	chr6:76329765-76329766	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs537875071	chr6:76329797-76329798	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs66827544	chr6:76329799-76329800	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs398002005	chr6:76329809-76329810	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs61380795	chr6:76329819-76329820	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs371879898	chr6:76329828-76329829	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs184174347	chr6:76329878-76329879	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs554027573	chr6:76329914-76329915	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs116467905	chr6:76329983-76329984	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs539138325	chr6:76329994-76329995	Weak transcription ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs535765969	chr6:76330032-76330033	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs140042127	chr6:76330092-76330093	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:3528 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:76313800-76331600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:76314000-76343200	Weak transcription	Fetal Kidney	kidney
3	chr6:76314200-76329000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr6:76314400-76334800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr6:76314400-76336800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr6:76318200-76334800	Weak transcription	Fetal Muscle Trunk	muscle
7	chr6:76319000-76329200	Weak transcription	Fetal Lung	lung
8	chr6:76319800-76333400	Weak transcription	HMEC	breast
9	chr6:76319800-76348400	Weak transcription	NHEK	skin
10	chr6:76320000-76329200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr6:76320200-76333200	Weak transcription	NH-A	brain
12	chr6:76320200-76351800	Weak transcription	HSMMtube	muscle
13	chr6:76320200-76391600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr6:76320600-76330000	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr6:76320800-76334400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr6:76321200-76348400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr6:76321600-76329000	Weak transcription	Brain Cingulate Gyrus	brain
18	chr6:76321600-76331600	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr6:76321600-76332800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
20	chr6:76321600-76334000	Weak transcription	HSMM	muscle
21	chr6:76321600-76339400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr6:76321800-76370400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
23	chr6:76322000-76341600	Weak transcription	NHLF	lung
24	chr6:76322400-76329400	Weak transcription	Right Ventricle	heart
25	chr6:76322600-76329400	Weak transcription	Aorta	Aorta
26	chr6:76322600-76361000	Weak transcription	Thymus	Thymus
27	chr6:76322800-76329400	Weak transcription	Lung	lung
28	chr6:76322800-76333800	Weak transcription	Placenta	Placenta
29	chr6:76323200-76329000	Weak transcription	Rectal Smooth Muscle	rectum
30	chr6:76323200-76329200	Weak transcription	Brain Anterior Caudate	brain
31	chr6:76323200-76329400	Weak transcription	Spleen	Spleen
32	chr6:76323200-76329600	Weak transcription	Colonic Mucosa	Colon
33	chr6:76323200-76329600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr6:76323200-76329800	Weak transcription	HUVEC	blood vessel
35	chr6:76323400-76329000	Weak transcription	Fetal Heart	heart
36	chr6:76323400-76330200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
37	chr6:76323600-76330200	Weak transcription	Primary hematopoietic stem cells	blood
38	chr6:76323800-76329400	Weak transcription	Rectal Mucosa Donor 29	rectum
39	chr6:76323800-76334000	Weak transcription	Hela-S3	cervix
40	chr6:76323800-76334200	Weak transcription	HepG2	liver
41	chr6:76324000-76329000	Weak transcription	Duodenum Smooth Muscle	Duodenum
42	chr6:76324000-76331600	Weak transcription	Primary B cells from cord blood	blood
43	chr6:76324400-76329600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
44	chr6:76324600-76330200	Weak transcription	NHDF-Ad	bronchial
45	chr6:76324800-76329400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
46	chr6:76325000-76329400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
47	chr6:76325000-76329400	Weak transcription	Small Intestine	intestine
48	chr6:76325000-76329600	Weak transcription	Fetal Stomach	stomach
49	chr6:76325000-76330000	Weak transcription	Gastric	stomach
50	chr6:76325000-76334800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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