Variant report

Variant	nsv886654
Chromosome Location	chr6:128471938-128555805
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:275)
CpG islands
(count:244)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:275 , 50 per page) page: 1 2 3 4 5 6

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:128503796-128503920	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:128551768-128552224	HepG2	liver:	n/a	n/a
3	BHLHE40	chr6:128535974-128536145	GM12878	blood:	n/a	n/a
4	CEBPB	chr6:128541700-128542036	IMR90	lung:	n/a	chr6:128541868-128541879
5	CEBPB	chr6:128528784-128528930	HepG2	liver:	n/a	n/a
6	CEBPB	chr6:128530051-128530313	A549	lung:	n/a	chr6:128530157-128530166
7	CEBPB	chr6:128525800-128526176	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr6:128541707-128542009	HepG2	liver:	n/a	chr6:128541868-128541879
9	CEBPB	chr6:128541728-128541988	A549	lung:	n/a	chr6:128541868-128541879
10	CEBPB	chr6:128529992-128530323	Hela-S3	cervix:	n/a	chr6:128530157-128530166
11	CEBPB	chr6:128507903-128508243	IMR90	lung:	n/a	n/a
12	CEBPB	chr6:128551746-128551921	HepG2	liver:	n/a	n/a
13	CEBPB	chr6:128551706-128552047	HepG2	liver:	n/a	n/a
14	CEBPB	chr6:128529976-128530368	IMR90	lung:	n/a	chr6:128530157-128530166
15	CEBPB	chr6:128473653-128473660	A549	lung:	n/a	n/a
16	CEBPB	chr6:128530010-128530323	HepG2	liver:	n/a	chr6:128530157-128530166
17	CEBPB	chr6:128490613-128490844	HepG2	liver:	n/a	chr6:128490742-128490753
18	CTCF	chr6:128489548-128489641	MCF-7	breast:	n/a	n/a
19	CTCF	chr6:128489539-128489605	Hela-S3	cervix:	n/a	n/a
20	CTCF	chr6:128489500-128489650	RPTEC	kidney:	n/a	n/a
21	CTCF	chr6:128515307-128515358	Fibrobl	skin:	n/a	n/a
22	CTCF	chr6:128489570-128489634	MCF-7	breast:	n/a	n/a
23	CTCF	chr6:128489460-128489610	HRE	kidney:	n/a	n/a
24	CTCF	chr6:128489539-128489698	NHEK	skin:	n/a	n/a
25	CTCF	chr6:128531020-128531170	HepG2	liver:	n/a	n/a
26	CTCF	chr6:128530980-128531130	HBMEC	blood vessel:	n/a	n/a
27	CTCF	chr6:128489520-128489670	GM12871	blood:	n/a	n/a
28	CTCF	chr6:128489540-128489690	NHEK	skin:	n/a	n/a
29	CTCF	chr6:128511713-128511771	Kidney_OC	kidney:	n/a	n/a
30	CTCF	chr6:128530560-128530710	HAc	cerebellar:	n/a	n/a
31	CTCF	chr6:128494100-128494250	AG09319	gingival:	n/a	n/a
32	CTCF	chr6:128489580-128489730	AG09309	skin:	n/a	n/a
33	CTCF	chr6:128526560-128526710	GM12871	blood:	n/a	n/a
34	CTCF	chr6:128490120-128490270	Caco-2	colon:	n/a	n/a
35	CTCF	chr6:128489520-128489670	BE2_C	brain:	n/a	n/a
36	CTCF	chr6:128489540-128489690	HEK293	kidney:	n/a	n/a
37	CTCF	chr6:128489440-128489590	HepG2	liver:	n/a	n/a
38	CTCF	chr6:128494080-128494230	HepG2	liver:	n/a	n/a
39	CTCF	chr6:128511802-128511857	GM10248	blood:	n/a	n/a
40	CTCF	chr6:128493980-128494130	MCF-7	breast:	n/a	n/a
41	CTCF	chr6:128494080-128494230	AG04450	lung:	n/a	n/a
42	CTCF	chr6:128531040-128531190	HCPEpiC	choroid plexus:	n/a	n/a
43	CTCF	chr6:128494040-128494190	AG09319	gingival:	n/a	n/a
44	CTCF	chr6:128540529-128540620	ProgFib	skin:	n/a	n/a
45	CTCF	chr6:128494060-128494210	HEK293	kidney:	n/a	n/a
46	CTCF	chr6:128510880-128511030	HepG2	liver:	n/a	n/a
47	CTCF	chr6:128480918-128480999	LNCaP	prostate:	n/a	n/a
48	CTCF	chr6:128489560-128489710	Caco-2	colon:	n/a	n/a
49	CTCF	chr6:128489380-128489530	BE2_C	brain:	n/a	n/a
50	CTCF	chr6:128494000-128494150	HBMEC	blood vessel:	n/a	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:128530306-128530356	GM06990	blood:	n/a
2	chr6:128541775-128541825	HNPCEpiC	eye:	n/a
3	chr6:128508152-128508202	BE2_C	brain:	n/a
4	chr6:128541775-128541825	K562	blood:	n/a
5	chr6:128541775-128541825	BJ	skin:	n/a
6	chr6:128508152-128508202	RPTEC	kidney:	n/a
7	chr6:128554002-128554052	NH-A	brain:	n/a
8	chr6:128554002-128554052	IMR90	lung:	fetal
9	chr6:128530306-128530356	HCPEpiC	choroid plexus:	n/a
10	chr6:128508152-128508202	HCM	heart:	n/a
11	chr6:128554002-128554052	ovcar-3	ovarian:	n/a
12	chr6:128530306-128530356	MCF10A-Er-Src	breast:	n/a
13	chr6:128554002-128554052	SK-N-MC	brain:	n/a
14	chr6:128554002-128554052	U87	brain:	n/a
15	chr6:128554002-128554052	ProgFib	skin:	n/a
16	chr6:128530306-128530356	HAEpiC	amniotic membrane:	n/a
17	chr6:128554002-128554052	AG09309	skin:	n/a
18	chr6:128554002-128554052	SK-N-SH_RA	brain:	n/a
19	chr6:128554002-128554052	HCPEpiC	choroid plexus:	n/a
20	chr6:128541775-128541825	SK-N-SH	brain:	n/a
21	chr6:128530306-128530356	PFSK-1	brain:	n/a
22	chr6:128554002-128554052	PrEC	prostate:	n/a
23	chr6:128554002-128554052	NHBE	bronchial:	n/a
24	chr6:128554002-128554052	HRPEpiC	eye:	n/a
25	chr6:128508152-128508202	Caco-2	colon:	n/a
26	chr6:128541775-128541825	BE2_C	brain:	n/a
27	chr6:128530306-128530356	GM19239	blood:	n/a
28	chr6:128530306-128530356	GM12892	blood:	n/a
29	chr6:128554002-128554052	NB4	blood:	n/a
30	chr6:128530306-128530356	LNCaP	prostate:	n/a
31	chr6:128554002-128554052	AoSMC	blood vessel:	n/a
32	chr6:128554002-128554052	BE2_C	brain:	n/a
33	chr6:128554002-128554052	HUVEC	blood vessel:	n/a
34	chr6:128508152-128508202	GM12891	blood:	n/a
35	chr6:128541775-128541825	Hepatocyte	liver:	n/a
36	chr6:128530306-128530356	HNPCEpiC	eye:	n/a
37	chr6:128508152-128508202	T-47D	breast:	n/a
38	chr6:128530306-128530356	HPAEpiC	pulmonary alveolar:	n/a
39	chr6:128508152-128508202	SK-N-MC	brain:	n/a
40	chr6:128508152-128508202	K562	blood:	n/a
41	chr6:128554002-128554052	Jurkat	blood:	n/a
42	chr6:128530306-128530356	NH-A	brain:	n/a
43	chr6:128508152-128508202	Jurkat	blood:	n/a
44	chr6:128541775-128541825	SK-N-MC	brain:	n/a
45	chr6:128541775-128541825	AG09319	gingival:	n/a
46	chr6:128541775-128541825	AG04450	lung:	fetal
47	chr6:128541775-128541825	GM12892	blood:	n/a
48	chr6:128541775-128541825	PFSK-1	brain:	n/a
49	chr6:128508152-128508202	SK-N-SH_RA	brain:	n/a
50	chr6:128541775-128541825	HCT-116	colon:	n/a

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:128466074..128468137-chr6:128509732..128512228,2	MCF-7	breast:
2	chr6:128485115..128487072-chr6:128489971..128492431,2	K562	blood:
3	chr6:128532112..128533972-chr6:128540476..128542776,2	MCF-7	breast:
4	chr6:128484630..128487513-chr6:128490490..128493192,2	MCF-7	breast:
5	chr6:128475993..128477605-chr6:128555273..128557043,2	K562	blood:
6	chr5:125708522..125709239-chr6:128541147..128541690,2	HCT-116	colon:
7	chr6:128504665..128506343-chr6:128510955..128513912,2	K562	blood:
8	chr6:128531202..128533436-chr6:128533641..128536228,2	MCF-7	breast:
9	chr6:128555804..128558282-chr6:128839206..128841953,2	MCF-7	breast:
10	chr6:128468254..128470858-chr6:128470875..128473858,2	MCF-7	breast:
11	chr6:128504665..128506343-chr6:128510955..128513912,2	K562	blood:
12	chr14:63836099..63836920-chr6:128541621..128542384,2	MCF-7	breast:
13	chr6:128468628..128470982-chr6:128472532..128475032,2	MCF-7	breast:
14	chr6:128475993..128477605-chr6:128555273..128557043,2	K562	blood:
15	chr6:128485115..128487072-chr6:128489971..128492431,2	K562	blood:
16	chr6:128531202..128533436-chr6:128533641..128536228,2	MCF-7	breast:
17	chr6:128484630..128487513-chr6:128490490..128493192,2	MCF-7	breast:
18	chr6:128532112..128533972-chr6:128540476..128542776,2	MCF-7	breast:
19	chr6:128529927..128532522-chr6:128841893..128843396,2	MCF-7	breast:

No data

Variant related genes	Relation type
PTPRK	TF binding region
PTPRK	CpG island
ENSG00000152894	chromatin interactions

Extended variants
information (count: 2966 )
Associated
traits (count: 105 )

Variant overlapped rSNPs/rCNVs (count:2966 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4897246	chr6:128471938-128471939	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs548252929	chr6:128471965-128471966	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs138711317	chr6:128472114-128472115	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs527409467	chr6:128472116-128472117	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs75900336	chr6:128472128-128472129	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs76982133	chr6:128472160-128472161	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs141699574	chr6:128472172-128472173	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs577295220	chr6:128472189-128472190	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs201194258	chr6:128472196-128472197	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs180769844	chr6:128472197-128472198	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs568620998	chr6:128472203-128472204	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs374865662	chr6:128472216-128472217	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs531675999	chr6:128472245-128472246	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs138007124	chr6:128472320-128472321	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs535696608	chr6:128472376-128472377	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs554364589	chr6:128472384-128472385	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs572537141	chr6:128472426-128472427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs183790046	chr6:128472494-128472495	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs558137455	chr6:128472509-128472510	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs559712321	chr6:128472539-128472540	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs114757848	chr6:128472563-128472564	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs188523131	chr6:128472565-128472566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs574554901	chr6:128472614-128472615	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs550317730	chr6:128472639-128472640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs78675705	chr6:128472705-128472706	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs146214982	chr6:128472785-128472786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs139172369	chr6:128472839-128472840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs114119795	chr6:128472841-128472842	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs531240536	chr6:128472864-128472865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs142372214	chr6:128472865-128472866	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs568629750	chr6:128472889-128472890	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs565229330	chr6:128472913-128472914	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529605004	chr6:128472921-128472922	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs547633635	chr6:128472944-128472945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs375534040	chr6:128472958-128472959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs539936771	chr6:128473000-128473001	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs558323902	chr6:128473004-128473005	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs368055141	chr6:128473030-128473031	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs530518499	chr6:128473033-128473034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs565711803	chr6:128473057-128473058	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs532594665	chr6:128473058-128473059	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs111842313	chr6:128473162-128473163	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs77013743	chr6:128473179-128473180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs548108805	chr6:128473206-128473207	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs555755400	chr6:128473214-128473215	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs75983815	chr6:128473233-128473234	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs542119281	chr6:128473243-128473244	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs369289863	chr6:128473280-128473281	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs181436655	chr6:128473324-128473325	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs186958561	chr6:128473367-128473368	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:105)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21785460	CNVD
Neurocytoma	17123091	CNVD
Chordoma	21602918	CNVD
Kartagener syndrome	16639409	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Metastatic melanoma	18483359	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Ependymoma	18628472	CNVD
Ewing''s sarcoma	18628472	CNVD
Leukemia	18628472	CNVD
Breast cancer	21958427	CNVD
Mental retardation	17847001	CNVD
Cancer	17440070	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	21390271	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:774 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:128450200-128480800	Weak transcription	Primary B cells from cord blood	blood
2	chr6:128452600-128505200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr6:128456800-128488800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr6:128461400-128480400	Weak transcription	Duodenum Mucosa	Duodenum
5	chr6:128461400-128488600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:128461400-128488600	Weak transcription	NHEK	skin
7	chr6:128461400-128504400	Weak transcription	Fetal Intestine Large	intestine
8	chr6:128465600-128504400	Weak transcription	Fetal Thymus	thymus
9	chr6:128465600-128523200	Weak transcription	Left Ventricle	heart
10	chr6:128466200-128494000	Weak transcription	Fetal Heart	heart
11	chr6:128467400-128479200	Weak transcription	Ovary	ovary
12	chr6:128469400-128496200	Weak transcription	HepG2	liver
13	chr6:128470600-128472400	Enhancers	Muscle Satellite Cultured Cells	--
14	chr6:128470800-128472000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr6:128470800-128472400	Enhancers	HSMM	muscle
16	chr6:128471000-128472000	Enhancers	Osteobl	bone
17	chr6:128471400-128472200	Enhancers	NHLF	lung
18	chr6:128471600-128472000	Enhancers	HSMMtube	muscle
19	chr6:128471600-128472200	Enhancers	NH-A	brain
20	chr6:128471600-128479400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:128471800-128472400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr6:128472000-128473200	Weak transcription	HSMMtube	muscle
23	chr6:128472200-128473400	Weak transcription	NH-A	brain
24	chr6:128472400-128473400	Weak transcription	Muscle Satellite Cultured Cells	--
25	chr6:128472400-128475800	Weak transcription	HSMM	muscle
26	chr6:128472400-128494200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr6:128473200-128474200	Enhancers	HSMMtube	muscle
28	chr6:128473400-128473600	Enhancers	HMEC	breast
29	chr6:128473400-128474000	Enhancers	Muscle Satellite Cultured Cells	--
30	chr6:128473400-128474200	Enhancers	NH-A	brain
31	chr6:128473600-128489200	Weak transcription	HMEC	breast
32	chr6:128474000-128479600	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr6:128474200-128479600	Weak transcription	NH-A	brain
34	chr6:128475800-128477800	Strong transcription	HSMM	muscle
35	chr6:128477400-128477600	Enhancers	Primary monocytes fromperipheralblood	blood
36	chr6:128477600-128477800	Enhancers	Primary hematopoietic stem cells	blood
37	chr6:128477600-128477800	Enhancers	Gastric	stomach
38	chr6:128477600-128477800	Enhancers	HUVEC	blood vessel
39	chr6:128477800-128479400	Weak transcription	HUVEC	blood vessel
40	chr6:128477800-128479600	Weak transcription	Primary monocytes fromperipheralblood	blood
41	chr6:128477800-128504200	Weak transcription	HSMM	muscle
42	chr6:128479200-128480200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr6:128479400-128479600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr6:128479400-128479600	Enhancers	HUVEC	blood vessel
45	chr6:128479400-128479800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr6:128479600-128480000	Enhancers	Primary monocytes fromperipheralblood	blood
47	chr6:128479600-128480000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr6:128479600-128480000	Flanking Active TSS	NH-A	brain
49	chr6:128479600-128480200	Enhancers	Primary hematopoietic stem cells	blood
50	chr6:128479600-128480200	Enhancers	Muscle Satellite Cultured Cells	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links