Variant report

Variant	nsv886704
Chromosome Location	chr6:140902819-141079124
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:800)
CpG islands
(count:123)
Chromatin interactive
region (count:29)
LncRNA
region (count:2)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:800 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:140905921-140905975	K562	blood:	n/a	n/a
2	ATF1	chr6:141057542-141057722	K562	blood:	n/a	n/a
3	ATF1	chr6:141032327-141032490	K562	blood:	n/a	n/a
4	ATF2	chr6:140962459-140962964	GM12878	blood:	n/a	n/a
5	ATF2	chr6:140907544-140908522	GM12878	blood:	n/a	n/a
6	ATF2	chr6:140907528-140908482	GM12878	blood:	n/a	n/a
7	BACH1	chr6:141066249-141066420	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr6:141066206-141066385	K562	blood:	n/a	n/a
9	BACH1	chr6:140931711-140931747	K562	blood:	n/a	n/a
10	BATF	chr6:140907813-140908309	GM12878	blood:	n/a	n/a
11	BATF	chr6:140999274-140999525	GM12878	blood:	n/a	n/a
12	BATF	chr6:141066029-141066341	GM12878	blood:	n/a	chr6:141066245-141066256
13	BATF	chr6:140957343-140957787	GM12878	blood:	n/a	n/a
14	BATF	chr6:140962532-140962960	GM12878	blood:	n/a	n/a
15	BATF	chr6:140962571-140962917	GM12878	blood:	n/a	n/a
16	BATF	chr6:140907543-140908374	GM12878	blood:	n/a	n/a
17	BATF	chr6:141065980-141066438	GM12878	blood:	n/a	chr6:141066245-141066256
18	BCL11A	chr6:140907738-140908243	GM12878	blood:	n/a	n/a
19	BCL11A	chr6:140957373-140957725	GM12878	blood:	n/a	n/a
20	BCL11A	chr6:140962665-140962965	GM12878	blood:	n/a	n/a
21	BCL11A	chr6:140907600-140908344	GM12878	blood:	n/a	n/a
22	BCL11A	chr6:140962597-140962976	GM12878	blood:	n/a	n/a
23	BCL3	chr6:140907648-140908396	GM12878	blood:	n/a	n/a
24	BCL3	chr6:140907733-140908269	GM12878	blood:	n/a	n/a
25	BCL3	chr6:140923817-140924135	GM12878	blood:	n/a	n/a
26	BCLAF1	chr6:140907489-140908402	GM12878	blood:	n/a	n/a
27	BCLAF1	chr6:140907860-140908292	GM12878	blood:	n/a	n/a
28	BCLAF1	chr6:140957284-140957740	GM12878	blood:	n/a	n/a
29	BHLHE40	chr6:141032530-141032747	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:140962545-140962966	GM12878	blood:	n/a	n/a
31	CBX3	chr6:141068268-141068538	K562	blood:	n/a	n/a
32	CBX3	chr6:140948115-140948497	K562	blood:	n/a	n/a
33	CCNT2	chr6:141006502-141006618	K562	blood:	n/a	n/a
34	CEBPB	chr6:140911779-140912094	IMR90	lung:	n/a	chr6:140911918-140911929 chr6:140911918-140911931 chr6:140911917-140911934 chr6:140911918-140911931 chr6:140911918-140911929 chr6:140911918-140911931
35	CEBPB	chr6:140905206-140905380	HepG2	liver:	n/a	chr6:140905237-140905248
36	CEBPB	chr6:140992588-140992943	HepG2	liver:	n/a	chr6:140992865-140992876
37	CEBPB	chr6:140926256-140926456	HepG2	liver:	n/a	chr6:140926351-140926362 chr6:140926350-140926363
38	CEBPB	chr6:140933530-140933696	HepG2	liver:	n/a	n/a
39	CEBPB	chr6:140950874-140950971	Hela-S3	cervix:	n/a	chr6:140950893-140950904 chr6:140950895-140950906
40	CEBPB	chr6:141078984-141079681	IMR90	lung:	n/a	chr6:141079494-141079505
41	CEBPB	chr6:140928375-140928391	K562	blood:	n/a	n/a
42	CEBPB	chr6:141046992-141047275	HepG2	liver:	n/a	chr6:141047121-141047132
43	CEBPB	chr6:141006378-141006630	IMR90	lung:	n/a	n/a
44	CEBPB	chr6:140944477-140945154	HCT-116	colon:	n/a	chr6:140944736-140944747
45	CEBPB	chr6:140978710-140979038	HepG2	liver:	n/a	n/a
46	CEBPB	chr6:140944651-140944864	HepG2	liver:	n/a	chr6:140944736-140944747
47	CEBPB	chr6:140950761-140951042	K562	blood:	n/a	chr6:140950893-140950904 chr6:140950895-140950906
48	CEBPB	chr6:141006465-141006576	HepG2	liver:	n/a	n/a
49	CEBPB	chr6:140950718-140951059	HepG2	liver:	n/a	chr6:140950893-140950904 chr6:140950895-140950906
50	CEBPB	chr6:140944558-140944922	A549	lung:	n/a	chr6:140944736-140944747

(count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:140923112-140923162	AoSMC	blood vessel:	n/a
2	chr6:140923112-140923162	AoSMC	blood vessel:	n/a
3	chr6:140957775-140957825	AG10803	skin:	n/a
4	chr6:140957775-140957825	HAEpiC	amniotic membrane:	n/a
5	chr6:140957775-140957825	SAEC	small airway:	n/a
6	chr6:140923112-140923162	Hela-S3	cervix:	n/a
7	chr6:140957775-140957825	GM06990	blood:	n/a
8	chr6:140957775-140957825	CMK	blood:	n/a
9	chr6:140923112-140923162	AG04449	skin:	fetal
10	chr6:140957775-140957825	HRPEpiC	eye:	n/a
11	chr6:140957775-140957825	HL-60	blood:	n/a
12	chr6:140957775-140957825	ProgFib	skin:	n/a
13	chr6:140923112-140923162	HCM	heart:	n/a
14	chr6:140923112-140923162	SK-N-SH_RA	brain:	n/a
15	chr6:140957775-140957825	A549	lung:	n/a
16	chr6:140923112-140923162	HAEpiC	amniotic membrane:	n/a
17	chr6:140957775-140957825	PrEC	prostate:	n/a
18	chr6:140923112-140923162	ovcar-3	ovarian:	n/a
19	chr6:140957775-140957825	K562	blood:	n/a
20	chr6:140957775-140957825	HUVEC	blood vessel:	n/a
21	chr6:140923112-140923162	MCF10A-Er-Src	breast:	n/a
22	chr6:140957775-140957825	AG09309	skin:	n/a
23	chr6:140957775-140957825	MCF-7	breast:	n/a
24	chr6:140957775-140957825	NB4	blood:	n/a
25	chr6:140923112-140923162	GM12878	blood:	n/a
26	chr6:140957775-140957825	NHBE	bronchial:	n/a
27	chr6:140923112-140923162	GM19239	blood:	n/a
28	chr6:140957775-140957825	SK-N-SH	brain:	n/a
29	chr6:140923112-140923162	NH-A	brain:	n/a
30	chr6:140923112-140923162	MCF-7	breast:	n/a
31	chr6:140957775-140957825	AG09319	gingival:	n/a
32	chr6:140957775-140957825	T-47D	breast:	n/a
33	chr6:140923112-140923162	PANC-1	pancreas:	n/a
34	chr6:140923112-140923162	SKMC	muscle:	n/a
35	chr6:140957775-140957825	LNCaP	prostate:	n/a
36	chr6:140923112-140923162	GM12891	blood:	n/a
37	chr6:140923112-140923162	NHBE	bronchial:	n/a
38	chr6:140957775-140957825	GM12878	blood:	n/a
39	chr6:140957775-140957825	HPAEpiC	pulmonary alveolar:	n/a
40	chr6:140923112-140923162	LNCaP	prostate:	n/a
41	chr6:140923112-140923162	BE2_C	brain:	n/a
42	chr6:140957775-140957825	GM12892	blood:	n/a
43	chr6:140957775-140957825	ovcar-3	ovarian:	n/a
44	chr6:140923112-140923162	HRPEpiC	eye:	n/a
45	chr6:140923112-140923162	CMK	blood:	n/a
46	chr6:140923112-140923162	T-47D	breast:	n/a
47	chr6:140923112-140923162	NB4	blood:	n/a
48	chr6:140923112-140923162	GM12892	blood:	n/a
49	chr6:140923112-140923162	PFSK-1	brain:	n/a
50	chr6:140957775-140957825	SKMC	muscle:	n/a

(count:29 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:140781738..140784199-chr6:140901701..140903255,2	MCF-7	breast:
2	chr6:140919169..140921783-chr6:140922844..140925130,2	MCF-7	breast:
3	chr6:140912649..140915188-chr6:140915453..140918177,2	K562	blood:
4	chr6:140973276..140976134-chr6:140976580..140978655,2	MCF-7	breast:
5	chr6:140995862..140998424-chr6:141006767..141008386,2	K562	blood:
6	chr6:140973276..140976134-chr6:140976580..140978655,2	MCF-7	breast:
7	chr6:140988668..140990726-chr6:140994294..140996979,2	K562	blood:
8	chr6:140919169..140921783-chr6:140922844..140925130,2	MCF-7	breast:
9	chr6:140912649..140915188-chr6:140915453..140918177,2	K562	blood:
10	chr6:141041326..141043698-chr6:141051751..141054060,2	K562	blood:
11	chr6:140905427..140908857-chr6:140910975..140913769,3	K562	blood:
12	chr6:140905860..140907615-chr6:140923172..140925767,2	K562	blood:
13	chr6:140919683..140922477-chr6:140922951..140925065,2	K562	blood:
14	chr6:139691177..139693399-chr6:140971784..140974474,2	MCF-7	breast:
15	chr6:141043491..141046275-chr6:141049561..141051082,2	MCF-7	breast:
16	chr6:141069422..141072199-chr6:141082873..141085142,2	K562	blood:
17	chr6:140995862..140998424-chr6:141006767..141008386,2	K562	blood:
18	chr6:140905427..140908857-chr6:140910975..140913769,3	K562	blood:
19	chr6:140974220..140975794-chr6:140989570..140992507,2	K562	blood:
20	chr6:140976457..140978107-chr6:140978749..140981141,2	K562	blood:
21	chr6:140983001..140985814-chr6:140986473..140989700,3	K562	blood:
22	chr6:140974220..140975794-chr6:140989570..140992507,2	K562	blood:
23	chr6:140919683..140922477-chr6:140922951..140925065,2	K562	blood:
24	chr6:140983001..140985814-chr6:140986473..140989700,3	K562	blood:
25	chr6:141041326..141043698-chr6:141051751..141054060,2	K562	blood:
26	chr6:141043491..141046275-chr6:141049561..141051082,2	MCF-7	breast:
27	chr6:140976457..140978107-chr6:140978749..140981141,2	K562	blood:
28	chr6:140988668..140990726-chr6:140994294..140996979,2	K562	blood:
29	chr6:140905860..140907615-chr6:140923172..140925767,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HECA-10	chr6:140928455-140928491	l_3279_chr6:140928454-140973185_placenta
2	lnc-HECA-10	chr6:140972927-140973185	l_3279_chr6:140928454-140973185_placenta

miRNA name	Chromosome Location	mirBase accession
hsa-miR-4465	chr6:141004992-141005013	MIMAT0018992

No data

Variant related genes	Relation type
RPS3AP24	TF binding region
ENSG00000221336	TF binding region
MIR4465	TF binding region
RPS3AP24	CpG island
ENSG00000221336	CpG island
MIR4465	CpG island

Extended variants
information (count: 5014 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:5014 , 50 per page) page: 1 2 3 4 5 6 7 ... 101

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1414840	chr6:140902819-140902820	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs569452915	chr6:140902823-140902824	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs181664957	chr6:140902846-140902847	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs74659445	chr6:140902897-140902898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs572711185	chr6:140902899-140902900	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs533791585	chr6:140902983-140902984	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs373164015	chr6:140903061-140903062	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs531940889	chr6:140903081-140903082	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs555241104	chr6:140903141-140903142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs2328088	chr6:140903154-140903155	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs543849703	chr6:140903247-140903248	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs565801999	chr6:140903248-140903249	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs186197560	chr6:140903259-140903260	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs147038083	chr6:140903273-140903274	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs545094410	chr6:140903297-140903298	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs560618957	chr6:140903314-140903315	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs190602828	chr6:140903338-140903339	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs549637531	chr6:140903341-140903342	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs561548266	chr6:140903347-140903348	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs534901382	chr6:140903351-140903352	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs184090731	chr6:140903397-140903398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs549878921	chr6:140903488-140903489	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs148097235	chr6:140903494-140903495	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs141889745	chr6:140903499-140903500	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs547489047	chr6:140903533-140903534	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs565884693	chr6:140903562-140903563	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs533729947	chr6:140903572-140903573	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs115886639	chr6:140903574-140903575	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs188870465	chr6:140903579-140903580	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs538166230	chr6:140903580-140903581	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs536770680	chr6:140905643-140905644	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs559075797	chr6:140905691-140905692	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs151179072	chr6:140905716-140905717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs1577653	chr6:140905811-140905812	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs534942083	chr6:140905834-140905835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs562292850	chr6:140905842-140905843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs77009688	chr6:140905853-140905854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs369238009	chr6:140905855-140905856	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs376026054	chr6:140905856-140905857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs367717441	chr6:140905954-140905955	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs146767442	chr6:140905975-140905976	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs147945260	chr6:140905977-140905978	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs141845258	chr6:140905999-140906000	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs147125785	chr6:140906002-140906003	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs138131397	chr6:140906033-140906034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs140821038	chr6:140906049-140906050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs575424636	chr6:140906082-140906083	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs565025133	chr6:140906092-140906093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs532344283	chr6:140906107-140906108	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs72981807	chr6:140906115-140906116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute monocytic leukemia	16498392	CNVD
Endocrine pancreatic tumor	17914106	CNVD
Soft tissue tumor	16732325	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
craniofacial dysmorphism	21918468	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:364 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:140901400-140903200	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr6:140901400-140903400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr6:140902400-140903400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:140903200-140903600	Enhancers	Dnd41	blood
5	chr6:140903400-140903600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr6:140905600-140908600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr6:140906000-140906800	Weak transcription	GM12878-XiMat	blood
8	chr6:140906800-140907200	Enhancers	GM12878-XiMat	blood
9	chr6:140907200-140907800	Flanking Active TSS	GM12878-XiMat	blood
10	chr6:140907400-140907800	Enhancers	Psoas Muscle	Psoas
11	chr6:140907400-140907800	Enhancers	Right Ventricle	heart
12	chr6:140907400-140907800	Enhancers	Skeletal Muscle Female	skeletal muscle
13	chr6:140907400-140908000	Enhancers	Adipose Nuclei	Adipose
14	chr6:140907400-140908400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr6:140907600-140907800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr6:140907600-140908200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr6:140907800-140908400	Active TSS	GM12878-XiMat	blood
18	chr6:140907800-140908800	Weak transcription	Psoas Muscle	Psoas
19	chr6:140908200-140911400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr6:140908400-140908800	Flanking Active TSS	GM12878-XiMat	blood
21	chr6:140908400-140912000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr6:140908800-140909000	Enhancers	GM12878-XiMat	blood
23	chr6:140908800-140909200	ZNF genes & repeats	Psoas Muscle	Psoas
24	chr6:140910200-140910600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr6:140910600-140910800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr6:140910800-140912000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr6:140911400-140912400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr6:140911400-140912400	Enhancers	Muscle Satellite Cultured Cells	--
29	chr6:140911400-140912600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr6:140911600-140912600	Enhancers	NHDF-Ad	bronchial
31	chr6:140911600-140912600	Enhancers	Osteobl	bone
32	chr6:140912000-140912400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr6:140912000-140912600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:140912200-140912800	Enhancers	NHLF	lung
35	chr6:140917200-140917400	Enhancers	Aorta	Aorta
36	chr6:140920800-140922600	Enhancers	Fetal Lung	lung
37	chr6:140920800-140923800	Enhancers	Fetal Stomach	stomach
38	chr6:140921200-140921400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr6:140921400-140921600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr6:140921400-140922200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr6:140921600-140922600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr6:140921600-140924600	Enhancers	Osteobl	bone
43	chr6:140921800-140923800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr6:140922000-140923600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr6:140922200-140923800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
46	chr6:140922200-140924200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr6:140922200-140924600	Enhancers	NH-A	brain
48	chr6:140922200-140924800	Enhancers	NHDF-Ad	bronchial
49	chr6:140922600-140923000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr6:140922600-140923000	Weak transcription	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links