Variant report

Variant	nsv886936
Chromosome Location	chr6:166714024-166731289
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:600)
CpG islands
(count:1100)
Chromatin interactive
region (count:18)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:600 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:166715159-166715246	K562	blood:	n/a	n/a
2	ARID3A	chr6:166719692-166720195	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:166715322-166715710	HepG2	liver:	n/a	n/a
4	BACH1	chr6:166714035-166714049	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr6:166721825-166721891	H1-hESC	embryonic stem cell:	n/a	n/a
6	BACH1	chr6:166720441-166720971	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr6:166721222-166721264	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL3	chr6:166731131-166731441	GM12878	blood:	n/a	n/a
9	BCL3	chr6:166721858-166722322	GM12878	blood:	n/a	n/a
10	BCLAF1	chr6:166721860-166722417	GM12878	blood:	n/a	n/a
11	BCLAF1	chr6:166726640-166727171	GM12878	blood:	n/a	n/a
12	BHLHE40	chr6:166721775-166722393	GM12878	blood:	n/a	chr6:166722082-166722098
13	BHLHE40	chr6:166726733-166727080	HepG2	liver:	n/a	n/a
14	BHLHE40	chr6:166720543-166720920	GM12878	blood:	n/a	n/a
15	BHLHE40	chr6:166723852-166724052	K562	blood:	n/a	n/a
16	BHLHE40	chr6:166726741-166727086	GM12878	blood:	n/a	n/a
17	BHLHE40	chr6:166726746-166727076	K562	blood:	n/a	n/a
18	CBX3	chr6:166726743-166727068	K562	blood:	n/a	n/a
19	CBX3	chr6:166726714-166727103	K562	blood:	n/a	n/a
20	CCNT2	chr6:166720752-166720895	K562	blood:	n/a	n/a
21	CEBPB	chr6:166726449-166726942	HepG2	liver:	n/a	n/a
22	CEBPB	chr6:166719805-166720185	HepG2	liver:	n/a	n/a
23	CEBPB	chr6:166715429-166715728	HepG2	liver:	n/a	n/a
24	CEBPB	chr6:166719901-166720100	HepG2	liver:	n/a	n/a
25	CEBPB	chr6:166726327-166727013	K562	blood:	n/a	n/a
26	CEBPB	chr6:166717465-166717732	HepG2	liver:	n/a	chr6:166717567-166717578
27	CEBPB	chr6:166724290-166724467	H1-hESC	embryonic stem cell:	n/a	n/a
28	CEBPD	chr6:166724820-166725242	K562	blood:	n/a	n/a
29	CHD1	chr6:166721944-166722338	GM12878	blood:	n/a	n/a
30	CHD2	chr6:166722786-166722894	H1-hESC	embryonic stem cell:	n/a	n/a
31	CHD2	chr6:166720755-166720759	GM12878	blood:	n/a	n/a
32	CHD2	chr6:166719301-166719320	HepG2	liver:	n/a	n/a
33	CHD2	chr6:166721801-166721879	HepG2	liver:	n/a	chr6:166721862-166721872
34	CTCF	chr6:166720854-166721006	GM19238	blood:	n/a	n/a
35	CTCF	chr6:166727211-166727285	GM19238	blood:	n/a	n/a
36	CTCF	chr6:166726819-166727017	MCF-7	breast:	n/a	n/a
37	CTCF	chr6:166726800-166726950	HMF	breast:	n/a	n/a
38	CTCF	chr6:166726860-166727010	HRE	kidney:	n/a	n/a
39	CTCF	chr6:166726791-166727045	GM10248	blood:	n/a	n/a
40	CTCF	chr6:166726860-166727010	HBMEC	blood vessel:	n/a	n/a
41	CTCF	chr6:166726860-166727010	HCPEpiC	choroid plexus:	n/a	n/a
42	CTCF	chr6:166726780-166726930	NHEK	skin:	n/a	n/a
43	CTCF	chr6:166726820-166726970	HCT-116	colon:	n/a	n/a
44	CTCF	chr6:166726801-166727020	T-47D	breast:	n/a	n/a
45	CTCF	chr6:166726630-166727174	HCT-116	colon:	n/a	n/a
46	CTCF	chr6:166726840-166726990	HL-60	blood:	n/a	n/a
47	CTCF	chr6:166726770-166727154	K562	blood:	n/a	n/a
48	CTCF	chr6:166726840-166726990	SAEC	small airway:	n/a	n/a
49	CTCF	chr6:166720660-166720810	GM12865	blood:	n/a	n/a
50	CTCF	chr6:166726806-166727043	HepG2	liver:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:166722248-166722298	HIPEpiC	eye:	n/a
2	chr6:166720749-166720799	AG09319	gingival:	n/a
3	chr6:166722248-166722298	HIPEpiC	eye:	n/a
4	chr6:166720749-166720799	AG09319	gingival:	n/a
5	chr6:166722060-166722110	ECC-1	luminal epithelium:	n/a
6	chr6:166722060-166722110	Hela-S3	cervix:	n/a
7	chr6:166721644-166721694	ProgFib	skin:	n/a
8	chr6:166717758-166717808	SK-N-MC	brain:	n/a
9	chr6:166721155-166721205	HL-60	blood:	n/a
10	chr6:166717758-166717808	HCF	heart:	n/a
11	chr6:166722053-166722103	HCM	heart:	n/a
12	chr6:166720433-166720483	PANC-1	pancreas:	n/a
13	chr6:166720433-166720483	SK-N-MC	brain:	n/a
14	chr6:166720114-166720164	SK-N-MC	brain:	n/a
15	chr6:166721759-166721809	HUVEC	blood vessel:	n/a
16	chr6:166720997-166721047	HMEC	breast:	n/a
17	chr6:166720997-166721047	Jurkat	blood:	n/a
18	chr6:166722773-166722823	HRE	kidney:	n/a
19	chr6:166722060-166722110	Hepatocyte	liver:	n/a
20	chr6:166720114-166720164	HRPEpiC	eye:	n/a
21	chr6:166721155-166721205	HCPEpiC	choroid plexus:	n/a
22	chr6:166715306-166715356	HCM	heart:	n/a
23	chr6:166721759-166721809	A549	lung:	n/a
24	chr6:166722058-166722108	AG10803	skin:	n/a
25	chr6:166722062-166722112	HIPEpiC	eye:	n/a
26	chr6:166715306-166715356	HUVEC	blood vessel:	n/a
27	chr6:166715306-166715356	NHDF-neo	bronchial:	n/a
28	chr6:166715306-166715356	HMEC	breast:	n/a
29	chr6:166722165-166722215	Jurkat	blood:	n/a
30	chr6:166722248-166722298	NT2-D1	testis:	n/a
31	chr6:166722248-166722298	LNCaP	prostate:	n/a
32	chr6:166720749-166720799	NHBE	bronchial:	n/a
33	chr6:166721644-166721694	NH-A	brain:	n/a
34	chr6:166722248-166722298	SKMC	muscle:	n/a
35	chr6:166720114-166720164	GM12878	blood:	n/a
36	chr6:166724408-166724458	GM19239	blood:	n/a
37	chr6:166722062-166722112	HCPEpiC	choroid plexus:	n/a
38	chr6:166721155-166721205	H1-hESC	embryonic stem cell:	embryo
39	chr6:166721155-166721205	AG09309	skin:	n/a
40	chr6:166722773-166722823	Hela-S3	cervix:	n/a
41	chr6:166722060-166722110	IMR90	lung:	fetal
42	chr6:166722053-166722103	BE2_C	brain:	n/a
43	chr6:166722060-166722110	HepG2	liver:	n/a
44	chr6:166722060-166722110	AG04450	lung:	fetal
45	chr6:166720433-166720483	PrEC	prostate:	n/a
46	chr6:166722165-166722215	HPAEpiC	pulmonary alveolar:	n/a
47	chr6:166722165-166722215	AG09309	skin:	n/a
48	chr6:166722773-166722823	Hepatocyte	liver:	n/a
49	chr6:166720092-166720142	PrEC	prostate:	n/a
50	chr6:166717758-166717808	ovcar-3	ovarian:	n/a

(count:18 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:166722484..166724020-chr6:166795532..166798475,2	K562	blood:
2	chr6:166713905..166716781-chr6:166720409..166722328,2	K562	blood:
3	chr6:166722635..166726585-chr6:166755013..166756920,3	K562	blood:
4	chr6:166729262..166731878-chr6:166741666..166743903,2	K562	blood:
5	chr6:166709970..166712406-chr6:166716038..166718668,2	K562	blood:
6	chr6:166720530..166722265-chr6:166724559..166726140,2	K562	blood:
7	chr6:166726414..166727356-chr6:166813994..166814993,6	K562	blood:
8	chr6:166722256..166724406-chr6:166752301..166754007,2	MCF-7	breast:
9	chr6:166726860..166727411-chr6:166795185..166795905,2	MCF-7	breast:
10	chr6:166710025..166712273-chr6:166716005..166718139,2	K562	blood:
11	chr6:166726834..166727369-chr6:167183620..167184170,2	MCF-7	breast:
12	chr6:166726357..166727438-chr6:166794885..166795636,3	K562	blood:
13	chr6:166712983..166714666-chr6:166752860..166755099,2	K562	blood:
14	chr6:166726149..166728361-chr6:166730618..166732594,2	K562	blood:
15	chr6:166726149..166728361-chr6:166730618..166732594,2	K562	blood:
16	chr6:166718072..166719641-chr6:166743205..166745434,2	K562	blood:
17	chr6:166719852..166722547-chr6:166755922..166758056,2	K562	blood:
18	chr6:166722651..166724604-chr6:166784233..166785851,2	K562	blood:

No data

Variant related genes	Relation type
PRR18	TF binding region
PRR18	CpG island
ENSG00000176381	chromatin interactions
ENSG00000198818	chromatin interactions
ENSG00000261420	chromatin interactions
ENSG00000060762	chromatin interactions

Extended variants
information (count: 852 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:852 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7757224	chr6:166714024-166714025	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs78981420	chr6:166714061-166714062	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs563648793	chr6:166714068-166714069	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs150895527	chr6:166714173-166714174	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs373301256	chr6:166714177-166714178	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs531013764	chr6:166714183-166714184	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs374719453	chr6:166714184-166714185	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs190651619	chr6:166714245-166714246	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs116142988	chr6:166714246-166714247	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs528834964	chr6:166714257-166714258	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs547327622	chr6:166714282-166714283	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs568691805	chr6:166714301-166714302	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs568848280	chr6:166714306-166714307	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs535690657	chr6:166714338-166714339	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs551118139	chr6:166714346-166714347	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs111603790	chr6:166714388-166714389	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs568766874	chr6:166714392-166714393	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs536725925	chr6:166714437-166714438	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs558174871	chr6:166714438-166714439	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs369556850	chr6:166714452-166714453	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs576418814	chr6:166714492-166714493	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs141715757	chr6:166714494-166714495	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs566286610	chr6:166714495-166714496	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs527995191	chr6:166714548-166714549	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs377489911	chr6:166714598-166714599	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs150537453	chr6:166714601-166714602	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs543268390	chr6:166714602-166714603	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs138626932	chr6:166714603-166714604	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs546310976	chr6:166714612-166714613	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs141626549	chr6:166714621-166714622	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs528497873	chr6:166714622-166714623	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs146192864	chr6:166714623-166714624	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs561533210	chr6:166714640-166714641	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs112348340	chr6:166714641-166714642	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs114579936	chr6:166714645-166714646	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs113924477	chr6:166714659-166714660	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs182476961	chr6:166714702-166714703	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs548052598	chr6:166714723-166714724	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs150067251	chr6:166714746-166714747	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs75876394	chr6:166714772-166714773	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs372961153	chr6:166714788-166714789	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs186292368	chr6:166714790-166714791	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs144372258	chr6:166714794-166714795	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs535739639	chr6:166714873-166714874	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs546388666	chr6:166714904-166714905	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs190685195	chr6:166714905-166714906	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs4710035	chr6:166714914-166714915	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs148772599	chr6:166714925-166714926	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs76427093	chr6:166714928-166714929	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs76510511	chr6:166714936-166714937	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ependymoma	20639864	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:607 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:166711000-166714400	Enhancers	Brain Hippocampus Middle	brain
2	chr6:166712000-166714400	Enhancers	Brain Anterior Caudate	brain
3	chr6:166712000-166715000	Enhancers	Brain Angular Gyrus	brain
4	chr6:166712000-166715800	Enhancers	Brain Substantia Nigra	brain
5	chr6:166713200-166716600	Enhancers	Liver	Liver
6	chr6:166713800-166714400	Enhancers	Brain Inferior Temporal Lobe	brain
7	chr6:166714000-166714800	Weak transcription	Brain Cingulate Gyrus	brain
8	chr6:166714400-166715600	Weak transcription	Brain Hippocampus Middle	brain
9	chr6:166714400-166715800	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr6:166714400-166717800	Weak transcription	Brain Anterior Caudate	brain
11	chr6:166714800-166715200	Enhancers	Brain Cingulate Gyrus	brain
12	chr6:166715000-166715800	Weak transcription	Brain Angular Gyrus	brain
13	chr6:166715000-166715800	Enhancers	HepG2	liver
14	chr6:166715200-166715400	Weak transcription	Brain Cingulate Gyrus	brain
15	chr6:166715200-166716000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr6:166715400-166716000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr6:166715400-166718200	Enhancers	Brain Cingulate Gyrus	brain
18	chr6:166715600-166719400	Enhancers	Brain Hippocampus Middle	brain
19	chr6:166715800-166716000	Bivalent Enhancer	HepG2	liver
20	chr6:166715800-166716200	Enhancers	Brain Angular Gyrus	brain
21	chr6:166715800-166716400	Enhancers	Brain Inferior Temporal Lobe	brain
22	chr6:166715800-166716400	Weak transcription	Brain Substantia Nigra	brain
23	chr6:166716200-166717600	Weak transcription	Brain Angular Gyrus	brain
24	chr6:166716400-166716600	Enhancers	Brain Substantia Nigra	brain
25	chr6:166716600-166717600	Weak transcription	Brain Substantia Nigra	brain
26	chr6:166716600-166719200	Weak transcription	Liver	Liver
27	chr6:166717000-166720200	Weak transcription	Pancreas	Pancrea
28	chr6:166717400-166718000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
29	chr6:166717600-166717800	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr6:166717600-166718600	Enhancers	Brain Angular Gyrus	brain
31	chr6:166717600-166719000	Bivalent Enhancer	Brain Inferior Temporal Lobe	brain
32	chr6:166717600-166719200	Enhancers	Brain Substantia Nigra	brain
33	chr6:166717800-166718000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr6:166717800-166718000	Bivalent Enhancer	HepG2	liver
35	chr6:166717800-166719200	Enhancers	Brain Anterior Caudate	brain
36	chr6:166718200-166719200	Weak transcription	Brain Cingulate Gyrus	brain
37	chr6:166718600-166718800	Enhancers	Pancreatic Islets	Pancreatic Islet
38	chr6:166718600-166719000	Bivalent Enhancer	Brain Angular Gyrus	brain
39	chr6:166718800-166722600	Active TSS	Pancreatic Islets	Pancreatic Islet
40	chr6:166719000-166719200	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
41	chr6:166719000-166719200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr6:166719000-166719400	Flanking Bivalent TSS/Enh	Brain Angular Gyrus	brain
43	chr6:166719000-166719400	Enhancers	Brain Germinal Matrix	brain
44	chr6:166719000-166719400	Flanking Bivalent TSS/Enh	Brain Inferior Temporal Lobe	brain
45	chr6:166719000-166720000	Bivalent Enhancer	Fetal Intestine Small	intestine
46	chr6:166719000-166720200	Bivalent Enhancer	Fetal Intestine Large	intestine
47	chr6:166719200-166719400	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr6:166719200-166719400	Enhancers	Liver	Liver
49	chr6:166719200-166719400	Flanking Active TSS	Brain Anterior Caudate	brain
50	chr6:166719200-166719400	Flanking Active TSS	Brain Cingulate Gyrus	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links