Variant report

Variant	nsv886941
Chromosome Location	chr6:166907173-166996991
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1117)
CpG islands
(count:2875)
Chromatin interactive
region (count:37)
LncRNA
region (count:0)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:1117 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr6:166920915-166921134	K562	blood:	n/a	n/a
2	ATF1	chr6:166925855-166925862	K562	blood:	n/a	n/a
3	ATF1	chr6:166928991-166929159	K562	blood:	n/a	n/a
4	ATF1	chr6:166954492-166954705	K562	blood:	n/a	n/a
5	ATF2	chr6:166954312-166954948	GM12878	blood:	n/a	n/a
6	ATF2	chr6:166954322-166955023	GM12878	blood:	n/a	n/a
7	ATF2	chr6:166912870-166913602	GM12878	blood:	n/a	n/a
8	ATF2	chr6:166913000-166913511	GM12878	blood:	n/a	n/a
9	BACH1	chr6:166960254-166960493	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr6:166960160-166960446	K562	blood:	n/a	n/a
11	BACH1	chr6:166928717-166928821	H1-hESC	embryonic stem cell:	n/a	chr6:166928759-166928773
12	BACH1	chr6:166984538-166984622	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr6:166986298-166986452	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr6:166965198-166965646	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr6:166912837-166913582	GM12878	blood:	n/a	n/a
16	BATF	chr6:166954334-166954896	GM12878	blood:	n/a	n/a
17	BATF	chr6:166913089-166913526	GM12878	blood:	n/a	n/a
18	BATF	chr6:166954374-166954723	GM12878	blood:	n/a	n/a
19	BCL11A	chr6:166954393-166954849	GM12878	blood:	n/a	chr6:166954559-166954568 chr6:166954560-166954569
20	BCL11A	chr6:166912909-166913539	GM12878	blood:	n/a	n/a
21	BCL11A	chr6:166954470-166954748	GM12878	blood:	n/a	chr6:166954559-166954568 chr6:166954560-166954569
22	BCL3	chr6:166920966-166921730	GM12878	blood:	n/a	n/a
23	BCL3	chr6:166920921-166921755	GM12878	blood:	n/a	n/a
24	BCLAF1	chr6:166954390-166954831	GM12878	blood:	n/a	chr6:166954559-166954568 chr6:166954560-166954569
25	BHLHE40	chr6:166954370-166954943	GM12878	blood:	n/a	n/a
26	BHLHE40	chr6:166908775-166909010	K562	blood:	n/a	n/a
27	BHLHE40	chr6:166910765-166910911	K562	blood:	n/a	n/a
28	BHLHE40	chr6:166921400-166921720	K562	blood:	n/a	n/a
29	BHLHE40	chr6:166926082-166926384	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:166982668-166982947	K562	blood:	n/a	chr6:166982816-166982825 chr6:166982815-166982824 chr6:166982814-166982827 chr6:166982810-166982831 chr6:166982816-166982825
31	BRCA1	chr6:166921291-166921301	GM12878	blood:	n/a	n/a
32	CBX3	chr6:166912943-166913188	K562	blood:	n/a	n/a
33	CBX3	chr6:166931210-166931373	K562	blood:	n/a	n/a
34	CBX3	chr6:166931184-166931428	K562	blood:	n/a	n/a
35	CBX3	chr6:166970045-166971079	HCT-116	colon:	n/a	n/a
36	CEBPB	chr6:166980420-166980981	IMR90	lung:	n/a	chr6:166980822-166980834
37	CEBPB	chr6:166994353-166994587	IMR90	lung:	n/a	n/a
38	CEBPB	chr6:166987131-166987232	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr6:166985741-166986323	IMR90	lung:	n/a	n/a
40	CEBPB	chr6:166928642-166928852	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr6:166966953-166967720	IMR90	lung:	n/a	n/a
42	CEBPB	chr6:166944203-166944657	MCF-7	breast:	n/a	chr6:166944492-166944505
43	CEBPB	chr6:166955978-166956150	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr6:166981880-166982137	HepG2	liver:	n/a	chr6:166982056-166982067
45	CEBPB	chr6:166941237-166941545	HepG2	liver:	n/a	chr6:166941381-166941392
46	CEBPB	chr6:166981890-166982250	K562	blood:	n/a	chr6:166982056-166982067
47	CEBPB	chr6:166944351-166944586	HepG2	liver:	n/a	chr6:166944492-166944505
48	CEBPB	chr6:166981986-166982136	MCF-7	breast:	n/a	chr6:166982056-166982067
49	CEBPB	chr6:166981891-166982106	IMR90	lung:	n/a	chr6:166982056-166982067
50	CEBPB	chr6:166970161-166970911	ECC-1	luminal epithelium:	n/a	n/a

(count:2875 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:166944375-166944425	PFSK-1	brain:	n/a
2	chr6:166954739-166954789	HNPCEpiC	eye:	n/a
3	chr6:166919277-166919327	Jurkat	blood:	n/a
4	chr6:166970727-166970777	HAEpiC	amniotic membrane:	n/a
5	chr6:166908574-166908624	PFSK-1	brain:	n/a
6	chr6:166908677-166908727	U87	brain:	n/a
7	chr6:166908379-166908429	Hela-S3	cervix:	n/a
8	chr6:166955885-166955935	NT2-D1	testis:	n/a
9	chr6:166944375-166944425	PFSK-1	brain:	n/a
10	chr6:166954739-166954789	HNPCEpiC	eye:	n/a
11	chr6:166919277-166919327	Jurkat	blood:	n/a
12	chr6:166970727-166970777	HAEpiC	amniotic membrane:	n/a
13	chr6:166908574-166908624	PFSK-1	brain:	n/a
14	chr6:166908677-166908727	U87	brain:	n/a
15	chr6:166908379-166908429	Hela-S3	cervix:	n/a
16	chr6:166955885-166955935	NT2-D1	testis:	n/a
17	chr6:166944191-166944241	PFSK-1	brain:	n/a
18	chr6:166907748-166907798	BE2_C	brain:	n/a
19	chr6:166954739-166954789	Hepatocyte	liver:	n/a
20	chr6:166984607-166984657	GM12878	blood:	n/a
21	chr6:166965512-166965562	SKMC	muscle:	n/a
22	chr6:166911767-166911817	HCPEpiC	choroid plexus:	n/a
23	chr6:166922931-166922981	Hepatocyte	liver:	n/a
24	chr6:166908574-166908624	IMR90	lung:	fetal
25	chr6:166921890-166921940	HCM	heart:	n/a
26	chr6:166911009-166911059	HRPEpiC	eye:	n/a
27	chr6:166911121-166911171	HRCEpiC	kidney:	n/a
28	chr6:166980629-166980679	HRPEpiC	eye:	n/a
29	chr6:166986562-166986612	ProgFib	skin:	n/a
30	chr6:166944191-166944241	Caco-2	colon:	n/a
31	chr6:166924296-166924346	U87	brain:	n/a
32	chr6:166924296-166924346	HMEC	breast:	n/a
33	chr6:166944375-166944425	HCF	heart:	n/a
34	chr6:166955885-166955935	HCT-116	colon:	n/a
35	chr6:166984607-166984657	Hepatocyte	liver:	n/a
36	chr6:166959444-166959494	LNCaP	prostate:	n/a
37	chr6:166908379-166908429	HCM	heart:	n/a
38	chr6:166919577-166919627	HNPCEpiC	eye:	n/a
39	chr6:166944768-166944818	Hepatocyte	liver:	n/a
40	chr6:166907748-166907798	AG09309	skin:	n/a
41	chr6:166970252-166970302	GM12878	blood:	n/a
42	chr6:166996837-166996887	AG10803	skin:	n/a
43	chr6:166907748-166907798	LNCaP	prostate:	n/a
44	chr6:166908811-166908861	GM12878	blood:	n/a
45	chr6:166908811-166908861	A549	lung:	n/a
46	chr6:166908379-166908429	HCPEpiC	choroid plexus:	n/a
47	chr6:166911767-166911817	SK-N-MC	brain:	n/a
48	chr6:166959444-166959494	PrEC	prostate:	n/a
49	chr6:166908574-166908624	AoSMC	blood vessel:	n/a
50	chr6:166908758-166908808	GM19239	blood:	n/a

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:166912409..166913951-chr6:166915712..166917232,2	K562	blood:
2	chr15:91415474..91417592-chr6:166982215..166983716,2	K562	blood:
3	chr6:166869209..166870208-chr6:166925864..166926725,2	MCF-7	breast:
4	chr6:166912409..166913951-chr6:166915712..166917232,2	K562	blood:
5	chr6:166928192..166929030-chr6:167027760..167028686,4	MCF-7	breast:
6	chr6:166974194..166976909-chr6:166977553..166980494,3	K562	blood:
7	chr6:166925709..166926401-chr6:167041148..167042081,2	MCF-7	breast:
8	chr6:166974194..166976909-chr6:166977553..166980494,3	K562	blood:
9	chr6:166938386..166940136-chr6:166942749..166944700,2	K562	blood:
10	chr6:166914781..166916706-chr6:166917616..166920240,2	K562	blood:
11	chr6:166975267..166978295-chr6:166978843..166980508,3	K562	blood:
12	chr6:166914781..166916706-chr6:166917616..166920240,2	K562	blood:
13	chr6:166987161..166988700-chr6:166996130..166998368,2	K562	blood:
14	chr6:166908101..166910132-chr6:166956350..166959171,2	K562	blood:
15	chr6:166970917..166973753-chr6:166974346..166977201,2	K562	blood:
16	chr6:166982541..166984779-chr6:166986370..166988271,2	K562	blood:
17	chr6:166969437..166971704-chr6:167039008..167042376,3	MCF-7	breast:
18	chr6:166982541..166984779-chr6:166986370..166988271,2	K562	blood:
19	chr6:166959907..166962150-chr6:166966800..166968664,2	K562	blood:
20	chr6:166964236..166966556-chr6:166978667..166980857,2	K562	blood:
21	chr6:166917042..166919348-chr6:166921352..166923866,2	K562	blood:
22	chr6:166932943..166934797-chr6:166936117..166937896,2	K562	blood:
23	chr6:166921306..166923711-chr6:166924768..166926628,2	K562	blood:
24	chr6:166987161..166988700-chr6:166996130..166998368,2	K562	blood:
25	chr6:166935159..166937591-chr6:166943431..166946372,2	K562	blood:
26	chr6:166833688..166834541-chr6:166926014..166926681,2	MCF-7	breast:
27	chr6:166964236..166966556-chr6:166978667..166980857,2	K562	blood:
28	chr6:166950092..166951979-chr6:166959386..166961071,2	K562	blood:
29	chr6:166959907..166962150-chr6:166966800..166968664,2	K562	blood:
30	chr6:166938386..166940136-chr6:166942749..166944700,2	K562	blood:
31	chr6:166975267..166978295-chr6:166978843..166980508,3	K562	blood:
32	chr6:166950092..166951979-chr6:166959386..166961071,2	K562	blood:
33	chr6:166932943..166934797-chr6:166936117..166937896,2	K562	blood:
34	chr6:166921306..166923872-chr6:166924768..166927660,2	K562	blood:
35	chr6:166928469..166930058-chr6:167040238..167042581,2	MCF-7	breast:
36	chr6:166869518..166870276-chr6:166927954..166928779,2	MCF-7	breast:
37	chr6:166970917..166973753-chr6:166974346..166977201,2	K562	blood:

No data

miRNA name	Chromosome Location	mirBase accession
hsa-miR-1913	chr6:166922852-166922873	MIMAT0007888

No data

Variant related genes	Relation type
MIR1913	TF binding region
ENSG00000269048	TF binding region
RPS6KA2	TF binding region
MIR1913	CpG island
ENSG00000269048	CpG island
RPS6KA2	CpG island
ENSG00000140564	chromatin interactions
ENSG00000269048	chromatin interactions
ENSG00000222958	chromatin interactions
ENSG00000071242	chromatin interactions
SRSF4	Mature miRNA region

Extended variants
information (count: 4147 )
Associated
traits (count: 90 )

Variant overlapped rSNPs/rCNVs (count:4147 , 50 per page) page: 1 2 3 4 5 6 7 ... 83

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2235276	chr6:166907173-166907174	Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs559143004	chr6:166907182-166907183	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs568330746	chr6:166907188-166907189	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs577900470	chr6:166907236-166907237	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs189952800	chr6:166907269-166907270	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs369526128	chr6:166907270-166907271	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs560139420	chr6:166907298-166907299	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs182279426	chr6:166907366-166907367	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs6935893	chr6:166907373-166907374	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs529406609	chr6:166907389-166907390	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs9459682	chr6:166907404-166907405	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs531233663	chr6:166907408-166907409	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs2235275	chr6:166907409-166907410	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs59912183	chr6:166907412-166907413	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs532523588	chr6:166907414-166907415	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs369328691	chr6:166907417-166907418	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs566226590	chr6:166907479-166907480	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs533590746	chr6:166907502-166907503	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs74827229	chr6:166907512-166907513	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs111234740	chr6:166907515-166907516	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs530406614	chr6:166907519-166907520	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs548631108	chr6:166907531-166907532	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs375674111	chr6:166907581-166907582	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs372863767	chr6:166907610-166907611	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs570064116	chr6:166907615-166907616	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs537486919	chr6:166907634-166907635	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs559049841	chr6:166907669-166907670	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs188049713	chr6:166907670-166907671	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs193212027	chr6:166907701-166907702	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs553946862	chr6:166907738-166907739	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs572180750	chr6:166907748-166907749	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs9348142	chr6:166907753-166907754	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs370939200	chr6:166907766-166907767	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs554614609	chr6:166907772-166907773	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs538161353	chr6:166907802-166907803	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs575623426	chr6:166907816-166907817	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs543017698	chr6:166907846-166907847	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs374198186	chr6:166907883-166907884	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs185181982	chr6:166907928-166907929	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs28667899	chr6:166907929-166907930	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs16899003	chr6:166907949-166907950	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs143831323	chr6:166907954-166907955	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs114869236	chr6:166907967-166907968	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs115611502	chr6:166907991-166907992	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs530877817	chr6:166908028-166908029	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs557877100	chr6:166908054-166908055	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs570922311	chr6:166908074-166908075	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs535100425	chr6:166908075-166908076	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs78135871	chr6:166908077-166908078	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs188547069	chr6:166908102-166908103	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:90)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Ependymoma	20639864	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2589 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:166808200-166911800	Weak transcription	Psoas Muscle	Psoas
2	chr6:166862400-166920600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:166877200-166908800	Weak transcription	Colonic Mucosa	Colon
4	chr6:166884600-166911400	Weak transcription	HMEC	breast
5	chr6:166890600-166925200	Weak transcription	Colon Smooth Muscle	Colon
6	chr6:166892600-166910600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr6:166893000-166923200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:166893600-166921400	Weak transcription	Fetal Brain Male	brain
9	chr6:166894800-166928400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr6:166897000-166908800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr6:166897600-166922400	Weak transcription	HSMMtube	muscle
12	chr6:166899400-166929400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr6:166899600-166907200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:166899600-166907200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr6:166900400-166907800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr6:166900600-166912200	Weak transcription	Fetal Intestine Large	intestine
17	chr6:166901000-166907200	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr6:166901000-166907800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr6:166901000-166911800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr6:166901000-166954800	Weak transcription	Rectal Smooth Muscle	rectum
21	chr6:166901400-166922000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr6:166901600-166907200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr6:166902200-166954400	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr6:166902400-166917600	Weak transcription	Duodenum Mucosa	Duodenum
25	chr6:166902400-166922600	Weak transcription	Thymus	Thymus
26	chr6:166902400-166923600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
27	chr6:166902600-166908400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
28	chr6:166902600-166910800	Weak transcription	Primary T cells from cord blood	blood
29	chr6:166902600-166910800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
30	chr6:166902600-166916800	Weak transcription	Primary B cells from cord blood	blood
31	chr6:166902600-166952800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
32	chr6:166902800-166909200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr6:166903000-166915800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
34	chr6:166903000-166919200	Weak transcription	Primary T helper cells fromperipheralblood	blood
35	chr6:166903000-166925400	Strong transcription	Primary neutrophils fromperipheralblood	blood
36	chr6:166903200-166916000	Weak transcription	NHDF-Ad	bronchial
37	chr6:166903400-166907600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr6:166903600-166907600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
39	chr6:166903600-166916200	Weak transcription	HUES48 Cell Line	embryonic stem cell
40	chr6:166903800-166908800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr6:166903800-166911600	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr6:166903800-166911800	Weak transcription	H1 Cell Line	embryonic stem cell
43	chr6:166903800-166916200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr6:166903800-166916600	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr6:166903800-166922000	Weak transcription	HUES64 Cell Line	embryonic stem cell
46	chr6:166904000-166916400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr6:166904000-166923800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
48	chr6:166904200-166907600	Weak transcription	Osteobl	bone
49	chr6:166904400-166908400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr6:166904600-166907600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links