Variant report

Variant	nsv886946
Chromosome Location	chr6:167644277-168078883
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4049)
CpG islands
(count:7942)
Chromatin interactive
region (count:87)
LncRNA
region (count:35)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4049 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:167704338-167705733	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:168077862-168078060	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:168076248-168077330	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:167914216-167914636	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:167699867-167700232	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:167897882-167898046	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:167762709-167763005	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:167645950-167646149	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:167655013-167655211	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:167702230-167702578	HepG2	liver:	n/a	n/a
11	ARID3A	chr6:167722138-167722657	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:167682223-167682912	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:168061921-168062319	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:167754780-167756165	HepG2	liver:	n/a	n/a
15	ARID3A	chr6:167909614-167910025	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:167837621-167838022	HepG2	liver:	n/a	n/a
17	ARID3A	chr6:167811767-167812223	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:167652605-167653007	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:168068666-168069532	HepG2	liver:	n/a	n/a
20	ARID3A	chr6:168071535-168071811	HepG2	liver:	n/a	n/a
21	ARID3A	chr6:167911200-167911823	HepG2	liver:	n/a	n/a
22	ARID3A	chr6:167809998-167810531	HepG2	liver:	n/a	n/a
23	ARID3A	chr6:168073384-168073686	HepG2	liver:	n/a	n/a
24	ARID3A	chr6:167723215-167724601	HepG2	liver:	n/a	n/a
25	ARID3A	chr6:167651727-167651738	HepG2	liver:	n/a	n/a
26	ARID3A	chr6:167834911-167835243	HepG2	liver:	n/a	n/a
27	ATF1	chr6:167879998-167880949	K562	blood:	n/a	n/a
28	ATF1	chr6:167727339-167727444	K562	blood:	n/a	n/a
29	ATF1	chr6:168052185-168052482	K562	blood:	n/a	n/a
30	ATF1	chr6:167702337-167702425	K562	blood:	n/a	n/a
31	ATF2	chr6:167651500-167652487	H1-hESC	embryonic stem cell:	n/a	n/a
32	ATF2	chr6:167854274-167855007	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr6:167764830-167765266	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr6:167764810-167765270	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr6:167853840-167854853	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF3	chr6:167880066-167880374	K562	blood:	n/a	n/a
37	ATF3	chr6:168076762-168077073	HepG2	liver:	n/a	n/a
38	BACH1	chr6:167702257-167702472	H1-hESC	embryonic stem cell:	n/a	n/a
39	BACH1	chr6:167754224-167754403	H1-hESC	embryonic stem cell:	n/a	n/a
40	BACH1	chr6:167872264-167872267	K562	blood:	n/a	n/a
41	BACH1	chr6:167764960-167765154	H1-hESC	embryonic stem cell:	n/a	n/a
42	BATF	chr6:167764807-167765183	GM12878	blood:	n/a	n/a
43	BATF	chr6:167785311-167785621	GM12878	blood:	n/a	n/a
44	BATF	chr6:167702166-167702414	GM12878	blood:	n/a	n/a
45	BATF	chr6:167846472-167846674	GM12878	blood:	n/a	n/a
46	BATF	chr6:167801477-167801674	GM12878	blood:	n/a	n/a
47	BATF	chr6:167726053-167726251	GM12878	blood:	n/a	n/a
48	BATF	chr6:167726056-167726329	GM12878	blood:	n/a	n/a
49	BATF	chr6:167765430-167765771	GM12878	blood:	n/a	n/a
50	BATF	chr6:167765440-167765736	GM12878	blood:	n/a	n/a

(count:7942 , 50 per page) page: 1 2 3 4 5 6 7 ... 159

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:168045556-168045606	HCF	heart:	n/a
2	chr6:167813338-167813388	MCF-7	breast:	n/a
3	chr6:167680447-167680497	ovcar-3	ovarian:	n/a
4	chr6:167808366-167808416	HCF	heart:	n/a
5	chr6:167652028-167652078	HCF	heart:	n/a
6	chr6:167764620-167764670	HRCEpiC	kidney:	n/a
7	chr6:168070460-168070510	HCM	heart:	n/a
8	chr6:167649631-167649681	Hela-S3	cervix:	n/a
9	chr6:167816104-167816154	Caco-2	colon:	n/a
10	chr6:168063188-168063238	PANC-1	pancreas:	n/a
11	chr6:168059866-168059916	HL-60	blood:	n/a
12	chr6:167709237-167709287	K562	blood:	n/a
13	chr6:168045556-168045606	HCF	heart:	n/a
14	chr6:167813338-167813388	MCF-7	breast:	n/a
15	chr6:167680447-167680497	ovcar-3	ovarian:	n/a
16	chr6:167808366-167808416	HCF	heart:	n/a
17	chr6:167652028-167652078	HCF	heart:	n/a
18	chr6:167764620-167764670	HRCEpiC	kidney:	n/a
19	chr6:168070460-168070510	HCM	heart:	n/a
20	chr6:167649631-167649681	Hela-S3	cervix:	n/a
21	chr6:167816104-167816154	Caco-2	colon:	n/a
22	chr6:168063188-168063238	PANC-1	pancreas:	n/a
23	chr6:168059866-168059916	HL-60	blood:	n/a
24	chr6:167709237-167709287	K562	blood:	n/a
25	chr6:167808551-167808601	SKMC	muscle:	n/a
26	chr6:167836850-167836900	K562	blood:	n/a
27	chr6:168070460-168070510	BE2_C	brain:	n/a
28	chr6:167649336-167649386	ovcar-3	ovarian:	n/a
29	chr6:167709237-167709287	Hela-S3	cervix:	n/a
30	chr6:167836221-167836271	PANC-1	pancreas:	n/a
31	chr6:167704673-167704723	HCT-116	colon:	n/a
32	chr6:168054252-168054302	AG04449	skin:	fetal
33	chr6:168078772-168078822	GM12891	blood:	n/a
34	chr6:167813372-167813422	GM12892	blood:	n/a
35	chr6:167717313-167717363	A549	lung:	n/a
36	chr6:167765110-167765160	GM12891	blood:	n/a
37	chr6:168063188-168063238	GM12891	blood:	n/a
38	chr6:168072923-168072973	AG09309	skin:	n/a
39	chr6:168067047-168067097	HL-60	blood:	n/a
40	chr6:168067047-168067097	H1-hESC	embryonic stem cell:	embryo
41	chr6:168072923-168072973	HIPEpiC	eye:	n/a
42	chr6:167836221-167836271	HIPEpiC	eye:	n/a
43	chr6:168068810-168068860	ovcar-3	ovarian:	n/a
44	chr6:167649631-167649681	K562	blood:	n/a
45	chr6:167792181-167792231	GM12878	blood:	n/a
46	chr6:167763320-167763370	Jurkat	blood:	n/a
47	chr6:167789539-167789589	HCM	heart:	n/a
48	chr6:167792181-167792231	NHBE	bronchial:	n/a
49	chr6:167704673-167704723	GM12878	blood:	n/a
50	chr6:167798410-167798460	HCF	heart:	n/a

(count:87 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:167909651..167912483-chr6:167916491..167918061,2	K562	blood:
2	chr6:167934822..167935991-chr6:168151403..168152316,8	MCF-7	breast:
3	chr6:167715327..167717333-chr6:167717541..167719931,2	MCF-7	breast:
4	chr6:167703616..167705764-chr6:167717598..167719278,2	MCF-7	breast:
5	chr6:167736614..167738249-chr6:167740426..167742938,2	K562	blood:
6	chr6:167744023..167747282-chr6:167750789..167753119,3	K562	blood:
7	chr6:167823826..167826272-chr6:167829672..167831832,2	K562	blood:
8	chr6:167919860..167921861-chr6:167925968..167927495,2	K562	blood:
9	chr6:167925590..167928422-chr6:167931344..167934014,3	K562	blood:
10	chr6:167920908..167922945-chr6:167937159..167939048,2	K562	blood:
11	chr6:167818746..167821496-chr6:167831177..167833070,2	K562	blood:
12	chr6:167702039..167702568-chr6:167764606..167765474,2	MCF-7	breast:
13	chr6:167813417..167815135-chr6:167817698..167819518,2	K562	blood:
14	chr6:167744023..167747282-chr6:167750789..167753119,3	K562	blood:
15	chr6:167899955..167902434-chr6:168226970..168229339,2	MCF-7	breast:
16	chr6:167736614..167738249-chr6:167740426..167742938,2	K562	blood:
17	chr6:167856387..167858834-chr6:167859425..167861161,2	MCF-7	breast:
18	chr6:167920908..167922945-chr6:167937159..167939048,2	K562	blood:
19	chr6:167847263..167849209-chr6:167850968..167853200,2	K562	blood:
20	chr6:167925590..167928422-chr6:167931344..167934014,3	K562	blood:
21	chr6:167743283..167745523-chr6:167751106..167753120,2	K562	blood:
22	chr6:167861842..167863961-chr6:167871708..167874372,2	MCF-7	breast:
23	chr6:167662732..167663315-chr6:167819023..167819880,2	K562	blood:
24	chr6:167743283..167745523-chr6:167751106..167753120,2	K562	blood:
25	chr6:167913934..167914986-chr6:168072123..168073143,3	MCF-7	breast:
26	chr6:167699179..167702166-chr6:167703091..167705361,2	K562	blood:
27	chr6:167734899..167737753-chr6:167743376..167745822,2	MCF-7	breast:
28	chr6:167919001..167920837-chr6:168203315..168206200,2	K562	blood:
29	chr6:168043293..168045064-chr6:168047210..168049663,2	K562	blood:
30	chr6:168065299..168068746-chr6:168069175..168071663,3	K562	blood:
31	chr6:167662535..167665478-chr6:167668701..167671430,2	K562	blood:
32	chr6:167662732..167663315-chr6:167819023..167819880,2	K562	blood:
33	chr6:167861114..167862770-chr6:167864604..167866360,2	K562	blood:
34	chr6:167856387..167858834-chr6:167859425..167861161,2	MCF-7	breast:
35	chr6:167861842..167863961-chr6:167871708..167874372,2	MCF-7	breast:
36	chr1:28836187..28837925-chr6:167694572..167696254,2	K562	blood:
37	chr6:167861114..167862770-chr6:167864604..167866360,2	K562	blood:
38	chr6:167846347..167849301-chr6:167863544..167865130,2	K562	blood:
39	chr6:167631565..167632072-chr6:167702069..167702692,3	K562	blood:
40	chr6:167934371..167936970-chr6:168150080..168151827,3	MCF-7	breast:
41	chr6:167636874..167638495-chr6:167694115..167696567,2	K562	blood:
42	chr6:167891339..167893713-chr6:167896791..167899054,2	MCF-7	breast:
43	chr6:168073205..168076188-chr6:168082234..168084957,2	K562	blood:
44	chr6:168044561..168046507-chr6:168060055..168061561,2	K562	blood:
45	chr6:167897864..167898510-chr6:168299474..168300098,2	MCF-7	breast:
46	chr6:168040917..168042569-chr6:168050282..168052212,2	K562	blood:
47	chr6:167734899..167737753-chr6:167743376..167745822,2	MCF-7	breast:
48	chr6:167668192..167671777-chr6:167684157..167687082,3	K562	blood:
49	chr6:167715327..167717333-chr6:167717541..167719931,2	MCF-7	breast:
50	chr6:167847263..167849209-chr6:167850968..167853200,2	K562	blood:

(count:35 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-UNC93A-3	chr6:167764293-167764966	NONHSAT116095
2	lnc-UNC93A-2	chr6:167760960-167761541	NONHSAT116094
3	lnc-TCP10-4	chr6:167909845-167909968	NONHSAT116105
4	lnc-TCP10-5	chr6:167928070-167929025	ucscGeneNc_uc003qvz_2
5	lnc-GPR31-1	chr6:167653636-167653833	XLOC_005921
6	lnc-TTLL2-1	chr6:167803650-167803969	XLOC_005541
7	lnc-TCP10-3	chr6:167838864-167838906	ucscGeneNc_uc003qvy_1
8	lnc-TCP10-1	chr6:167786578-167786848	NONHSAT116097
9	lnc-C6orf123-5	chr6:168067524-168071589	NONHSAT116106
10	lnc-TTLL2-1	chr6:167804760-167804979	XLOC_005541
11	lnc-GPR31-1	chr6:167653688-167653968	XLOC_005921
12	lnc-UNC93A-1	chr6:167659275-167659404	XLOC_005540
13	lnc-TCP10-4	chr6:167910539-167910634	NONHSAT116105
14	lnc-C6orf123-5	chr6:168078740-168078879	NONHSAT116106
15	lnc-TCP10-3	chr6:167823155-167825466	ucscGeneNc_uc003qvy_1
16	lnc-TCP10-3	chr6:167839733-167839819	ucscGeneNc_uc003qvy_1
17	lnc-UNC93A-1	chr6:167655379-167655453	XLOC_005540
18	lnc-TCP10-1	chr6:167787839-167789289	NONHSAT116097
19	lnc-C6orf123-5	chr6:168067520-168071589	ENSG00000272549.1
20	lnc-TCP10-2	chr6:167822441-167822752	ucscGeneNc_uc003qvx_1
21	lnc-MLLT4-10	chr6:168076055-168076456	expReg_chr6_12937_+
22	lnc-GPR31-1	chr6:167650996-167651293	XLOC_005921
23	lnc-C6orf123-5	chr6:168078740-168078879	ENSG00000272549.1
24	lnc-TCP10-3	chr6:167825862-167825976	ucscGeneNc_uc003qvy_1
25	lnc-TCP10-2	chr6:167821589-167821728	ucscGeneNc_uc003qvx_1
26	lnc-TCP10-5	chr6:167940138-167940236	ucscGeneNc_uc003qvz_2
27	lnc-TCP10-3	chr6:167826637-167827774	ucscGeneNc_uc003qvy_1
28	lnc-UNC93A-3	chr6:167764976-167765446	NONHSAT116095
29	lnc-TCP10-2	chr6:167810373-167814438	ucscGeneNc_uc003qvx_1
30	lnc-TCP10-3	chr6:167839445-167839616	ucscGeneNc_uc003qvy_1
31	lnc-TTLL2-2	chr6:167840757-167840858	NONHSAT116104
32	lnc-TCP10-5	chr6:167930843-167931136	ucscGeneNc_uc003qvz_2
33	lnc-GPR31-1	chr6:167651156-167651293	XLOC_005921
34	lnc-TCP10-5	chr6:167934476-167934622	ucscGeneNc_uc003qvz_2
35	lnc-TTLL2-2	chr6:167837702-167837948	NONHSAT116104

No data

Variant related genes	Relation type
UNC93A	TF binding region
TCP10	TF binding region
TTLL2	TF binding region
ENSG00000231720	TF binding region
ENSG00000228648	TF binding region
ENSG00000217447	TF binding region
UNC93A	CpG island
TCP10	CpG island
TTLL2	CpG island
ENSG00000231720	CpG island
ENSG00000228648	CpG island
ENSG00000217447	CpG island
ENSG00000203688	chromatin interactions
ENSG00000101166	chromatin interactions
ENSG00000198221	chromatin interactions
ENSG00000130396	chromatin interactions
ENSG00000180198	chromatin interactions
ENSG00000112494	chromatin interactions
CYB5R4	miRNA target sites
CYBASC3	miRNA target sites

Extended variants
information (count: 15548 )
Associated
traits (count: 98 )

Variant overlapped rSNPs/rCNVs (count:15548 , 50 per page) page: 1 2 3 4 5 6 7 ... 311

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7761658	chr6:167644277-167644278	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs370116215	chr6:167644307-167644308	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
3	rs34149205	chr6:167644327-167644328	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
4	rs76739368	chr6:167644329-167644330	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
5	rs7740817	chr6:167644355-167644356	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
6	rs573716072	chr6:167644433-167644434	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
7	rs538050858	chr6:167644435-167644436	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
8	rs181819323	chr6:167644442-167644443	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
9	rs35042706	chr6:167644492-167644493	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
10	rs375403328	chr6:167644536-167644537	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
11	rs144376402	chr6:167644588-167644589	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
12	rs545150995	chr6:167644599-167644600	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
13	rs13362782	chr6:167644634-167644635	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs186120095	chr6:167644690-167644691	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs13362602	chr6:167644697-167644698	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs9356574	chr6:167644699-167644700	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs531783600	chr6:167644704-167644705	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs549978511	chr6:167644705-167644706	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs575293763	chr6:167644706-167644707	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs536833603	chr6:167644752-167644753	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs143837251	chr6:167644777-167644778	Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs532449701	chr6:167644818-167644819	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs547533583	chr6:167644958-167644959	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
24	rs551774400	chr6:167644965-167644966	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
25	rs73269419	chr6:167644991-167644992	Active TSS Weak transcription Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs191382085	chr6:167645033-167645034	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs371966181	chr6:167645042-167645043	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs10214844	chr6:167645043-167645044	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs538174371	chr6:167645089-167645090	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs540951300	chr6:167645118-167645119	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs28756382	chr6:167645126-167645127	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs1854854	chr6:167645139-167645140	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs546882541	chr6:167645170-167645171	Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs183443943	chr6:167645208-167645209	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
35	rs372012117	chr6:167645215-167645216	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
36	rs1854855	chr6:167645266-167645267	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs111297123	chr6:167645296-167645297	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
38	rs142846265	chr6:167645300-167645301	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
39	rs74508469	chr6:167645301-167645302	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
40	rs2150665	chr6:167645302-167645303	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs1854856	chr6:167645342-167645343	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs576660205	chr6:167645360-167645361	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
43	rs151040487	chr6:167645365-167645366	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
44	rs186309453	chr6:167645384-167645385	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
45	rs1854857	chr6:167645406-167645407	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs575666021	chr6:167645448-167645449	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs541087875	chr6:167645464-167645465	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs560768953	chr6:167645465-167645466	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs191173181	chr6:167645491-167645492	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs548545067	chr6:167645492-167645493	Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:98)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Developmental delay	21147756	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Cancer	20164919	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Ependymoma	20639864	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21865298	CNVD
Cancer	17440070	CNVD
Schizophrenia	20967226	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:3528 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167640000-167648600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr6:167640200-167645400	Weak transcription	HepG2	liver
3	chr6:167640200-167646000	Weak transcription	Fetal Intestine Large	intestine
4	chr6:167640800-167645400	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr6:167641400-167645400	Active TSS	H9 Cell Line	embryonic stem cell
6	chr6:167641400-167645800	Active TSS	iPS-15b Cell Line	embryonic stem cell
7	chr6:167641600-167644600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:167641600-167644800	Active TSS	HUES48 Cell Line	embryonic stem cell
9	chr6:167641600-167645000	Active TSS	iPS-18 Cell Line	embryonic stem cell
10	chr6:167641600-167645200	Active TSS	H1 Cell Line	embryonic stem cell
11	chr6:167643200-167647200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:167643400-167647000	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
13	chr6:167643400-167647200	Weak transcription	Fetal Brain Male	brain
14	chr6:167643600-167645400	Active TSS	HUES6 Cell Line	embryonic stem cell
15	chr6:167643600-167646400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr6:167643600-167648600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr6:167644000-167646000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr6:167644200-167644800	Active TSS	HUES64 Cell Line	embryonic stem cell
19	chr6:167644200-167645400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr6:167644200-167645400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr6:167644200-167646200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr6:167644200-167646200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
23	chr6:167644200-167649800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
24	chr6:167644600-167644800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
25	chr6:167644800-167645400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
26	chr6:167644800-167646200	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
27	chr6:167644800-167647200	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
28	chr6:167645000-167645200	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
29	chr6:167645200-167645400	Flanking Active TSS	H1 Cell Line	embryonic stem cell
30	chr6:167645200-167647400	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
31	chr6:167645400-167645600	Transcr. at gene 5' and 3'	H1 Cell Line	embryonic stem cell
32	chr6:167645400-167645600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
33	chr6:167645400-167646000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr6:167645400-167646000	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr6:167645400-167647000	Enhancers	HepG2	liver
36	chr6:167645400-167647200	Genic enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr6:167645400-167647200	Enhancers	Fetal Intestine Small	intestine
38	chr6:167645400-167647400	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
39	chr6:167645400-167652800	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
40	chr6:167645600-167648600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr6:167645600-167650600	Genic enhancers	H1 Cell Line	embryonic stem cell
42	chr6:167645800-167646000	Enhancers	iPS-15b Cell Line	embryonic stem cell
43	chr6:167646000-167646200	Transcr. at gene 5' and 3'	iPS-15b Cell Line	embryonic stem cell
44	chr6:167646000-167647000	Genic enhancers	ES-I3 Cell Line	embryonic stem cell
45	chr6:167646000-167647000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr6:167646000-167647000	Enhancers	Fetal Intestine Large	intestine
47	chr6:167646000-167647400	Genic enhancers	H9 Cell Line	embryonic stem cell
48	chr6:167646200-167646400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr6:167646200-167648800	Genic enhancers	HUES64 Cell Line	embryonic stem cell
50	chr6:167646200-167649000	Genic enhancers	iPS-15b Cell Line	embryonic stem cell

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