Variant report

Variant	nsv887316
Chromosome Location	chr7:2904928-2983520
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1666)
CpG islands
(count:2564)
Chromatin interactive
region (count:115)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:1666 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:2913609-2913990	K562	blood:	n/a	n/a
2	ATF2	chr7:2942537-2943147	GM12878	blood:	n/a	n/a
3	ATF2	chr7:2913487-2914033	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr7:2942603-2943072	GM12878	blood:	n/a	n/a
5	ATF2	chr7:2933680-2934748	GM12878	blood:	n/a	n/a
6	ATF2	chr7:2933880-2934577	GM12878	blood:	n/a	n/a
7	ATF2	chr7:2913394-2914228	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr7:2913655-2914149	K562	blood:	n/a	n/a
9	ATF3	chr7:2926674-2926871	K562	blood:	n/a	n/a
10	BACH1	chr7:2936759-2936854	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr7:2913746-2914108	K562	blood:	n/a	n/a
12	BATF	chr7:2934097-2934521	GM12878	blood:	n/a	n/a
13	BATF	chr7:2910061-2910395	GM12878	blood:	n/a	chr7:2910241-2910252
14	BATF	chr7:2942633-2942932	GM12878	blood:	n/a	n/a
15	BCL11A	chr7:2934091-2934638	GM12878	blood:	n/a	n/a
16	BCL11A	chr7:2942660-2942911	GM12878	blood:	n/a	n/a
17	BCL11A	chr7:2942648-2943021	GM12878	blood:	n/a	n/a
18	BCL3	chr7:2913560-2914151	A549	lung:	n/a	n/a
19	BCL3	chr7:2942678-2943040	GM12878	blood:	n/a	n/a
20	BCL3	chr7:2913494-2914148	A549	lung:	n/a	n/a
21	BCL3	chr7:2918733-2919505	GM12878	blood:	n/a	n/a
22	BCL3	chr7:2919424-2919981	GM12878	blood:	n/a	n/a
23	BCL3	chr7:2918789-2919147	GM12878	blood:	n/a	n/a
24	BCL3	chr7:2934206-2934640	GM12878	blood:	n/a	n/a
25	BCL3	chr7:2919522-2919998	GM12878	blood:	n/a	n/a
26	BCLAF1	chr7:2913494-2914201	K562	blood:	n/a	n/a
27	BCLAF1	chr7:2942659-2943082	GM12878	blood:	n/a	n/a
28	BCLAF1	chr7:2926565-2927028	GM12878	blood:	n/a	n/a
29	BCLAF1	chr7:2913540-2914174	K562	blood:	n/a	n/a
30	BCLAF1	chr7:2933758-2934752	GM12878	blood:	n/a	chr7:2934635-2934644
31	BCLAF1	chr7:2942536-2943151	GM12878	blood:	n/a	n/a
32	BCLAF1	chr7:2904632-2904983	GM12878	blood:	n/a	n/a
33	BHLHE40	chr7:2914938-2915044	K562	blood:	n/a	n/a
34	BHLHE40	chr7:2926595-2926936	A549	lung:	n/a	n/a
35	BHLHE40	chr7:2942597-2942967	GM12878	blood:	n/a	n/a
36	BHLHE40	chr7:2904688-2904999	GM12878	blood:	n/a	n/a
37	BHLHE40	chr7:2904693-2904985	K562	blood:	n/a	n/a
38	BHLHE40	chr7:2908775-2908967	K562	blood:	n/a	n/a
39	BHLHE40	chr7:2925890-2925978	K562	blood:	n/a	n/a
40	BHLHE40	chr7:2926566-2926987	K562	blood:	n/a	n/a
41	BHLHE40	chr7:2926562-2927004	GM12878	blood:	n/a	n/a
42	BHLHE40	chr7:2934007-2934614	GM12878	blood:	n/a	n/a
43	BHLHE40	chr7:2926584-2926969	HepG2	liver:	n/a	n/a
44	BRCA1	chr7:2934544-2934554	GM12878	blood:	n/a	n/a
45	BRCA1	chr7:2943343-2943438	HepG2	liver:	n/a	n/a
46	CCNT2	chr7:2913763-2914140	K562	blood:	n/a	n/a
47	CEBPB	chr7:2943013-2943642	HepG2	liver:	n/a	chr7:2943440-2943451
48	CEBPB	chr7:2915079-2915217	IMR90	lung:	n/a	chr7:2915130-2915141
49	CEBPB	chr7:2914969-2915165	K562	blood:	n/a	chr7:2915130-2915141
50	CEBPB	chr7:2926619-2927062	GM12878	blood:	n/a	chr7:2926834-2926842

(count:2564 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:2944127-2944177	GM12891	blood:	n/a
2	chr7:2958284-2958334	HRCEpiC	kidney:	n/a
3	chr7:2944127-2944177	GM12891	blood:	n/a
4	chr7:2958284-2958334	HRCEpiC	kidney:	n/a
5	chr7:2944127-2944177	HCM	heart:	n/a
6	chr7:2958284-2958334	GM19239	blood:	n/a
7	chr7:2971898-2971948	PFSK-1	brain:	n/a
8	chr7:2976787-2976837	SK-N-MC	brain:	n/a
9	chr7:2945922-2945972	AG09319	gingival:	n/a
10	chr7:2945922-2945972	HNPCEpiC	eye:	n/a
11	chr7:2968559-2968609	HUVEC	blood vessel:	n/a
12	chr7:2946518-2946568	IMR90	lung:	fetal
13	chr7:2944127-2944177	MCF-7	breast:	n/a
14	chr7:2945922-2945972	Hela-S3	cervix:	n/a
15	chr7:2971898-2971948	ProgFib	skin:	n/a
16	chr7:2967973-2968023	GM19239	blood:	n/a
17	chr7:2958284-2958334	HMEC	breast:	n/a
18	chr7:2962240-2962290	Hela-S3	cervix:	n/a
19	chr7:2953836-2953886	MCF-7	breast:	n/a
20	chr7:2962240-2962290	U87	brain:	n/a
21	chr7:2962373-2962423	GM12878	blood:	n/a
22	chr7:2953836-2953886	HMEC	breast:	n/a
23	chr7:2933297-2933347	IMR90	lung:	fetal
24	chr7:2958284-2958334	Hepatocyte	liver:	n/a
25	chr7:2972392-2972442	GM12891	blood:	n/a
26	chr7:2968316-2968366	SK-N-SH	brain:	n/a
27	chr7:2946264-2946314	HEK293	kidney:	embryo
28	chr7:2962304-2962354	SK-N-SH_RA	brain:	n/a
29	chr7:2968406-2968456	NB4	blood:	n/a
30	chr7:2944127-2944177	HNPCEpiC	eye:	n/a
31	chr7:2977037-2977087	SK-N-MC	brain:	n/a
32	chr7:2976855-2976905	HEEpiC	esophagus:	n/a
33	chr7:2962304-2962354	A549	lung:	n/a
34	chr7:2962240-2962290	HCM	heart:	n/a
35	chr7:2908816-2908866	IMR90	lung:	fetal
36	chr7:2946319-2946369	AoSMC	blood vessel:	n/a
37	chr7:2968595-2968645	BE2_C	brain:	n/a
38	chr7:2953930-2953980	SK-N-SH_RA	brain:	n/a
39	chr7:2976787-2976837	NHBE	bronchial:	n/a
40	chr7:2958317-2958367	AG09319	gingival:	n/a
41	chr7:2958317-2958367	MCF-7	breast:	n/a
42	chr7:2953930-2953980	Hepatocyte	liver:	n/a
43	chr7:2972392-2972442	MCF-7	breast:	n/a
44	chr7:2953836-2953886	HIPEpiC	eye:	n/a
45	chr7:2953930-2953980	HCF	heart:	n/a
46	chr7:2946319-2946369	MCF-7	breast:	n/a
47	chr7:2962373-2962423	NH-A	brain:	n/a
48	chr7:2953889-2953939	ProgFib	skin:	n/a
49	chr7:2921550-2921600	CMK	blood:	n/a
50	chr7:2962304-2962354	SK-N-MC	brain:	n/a

(count:115 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr7:2953518..2955325-chr7:2956793..2958637,3	K562	blood:
2	chr7:2913332..2915358-chr7:2931713..2934636,3	MCF-7	breast:
3	chr7:2902048..2907034-chr7:2912028..2916176,7	K562	blood:
4	chr7:2951702..2953400-chr7:2956754..2958330,2	K562	blood:
5	chr7:2926249..2926927-chr7:3240062..3240775,2	MCF-7	breast:
6	chr2:63881623..63882123-chr7:2913394..2913983,2	MCF-7	breast:
7	chr7:2773431..2776553-chr7:2903290..2905361,3	K562	blood:
8	chr7:2912665..2915404-chr7:2954032..2956544,2	MCF-7	breast:
9	chr7:2902048..2907034-chr7:2912028..2916176,7	K562	blood:
10	chr7:2922257..2924119-chr7:2925504..2928131,3	MCF-7	breast:
11	chr7:2934170..2935708-chr7:2937093..2939004,2	K562	blood:
12	chr7:2913679..2915409-chr7:2948312..2950468,2	K562	blood:
13	chr7:2741629..2743358-chr7:2912496..2914112,2	MCF-7	breast:
14	chr7:2926599..2927259-chr7:3129024..3129578,2	MCF-7	breast:
15	chr7:2902294..2906267-chr7:2911344..2915860,6	MCF-7	breast:
16	chr7:2926330..2927157-chr7:3107129..3108063,2	K562	blood:
17	chr7:2941519..2943724-chr7:2945322..2946840,2	K562	blood:
18	chr7:2756357..2758230-chr7:2913588..2915207,2	K562	blood:
19	chr7:2961215..2963886-chr7:2968624..2970785,2	K562	blood:
20	chr7:2963250..2965630-chr7:2965961..2967966,2	MCF-7	breast:
21	chr7:2898176..2901169-chr7:2925021..2926702,2	MCF-7	breast:
22	chr7:2956076..2958556-chr7:2973835..2976275,2	K562	blood:
23	chr7:2913187..2915316-chr7:2934287..2938323,4	MCF-7	breast:
24	chr7:2765987..2767682-chr7:2913183..2915422,2	MCF-7	breast:
25	chr7:2925307..2926930-chr7:3193219..3196331,3	MCF-7	breast:
26	chr7:2882613..2885726-chr7:2911759..2915688,5	MCF-7	breast:
27	chr7:2925014..2926556-chr7:2928652..2930523,2	K562	blood:
28	chr7:2939828..2942768-chr7:2948228..2950004,2	K562	blood:
29	chr7:2963250..2965630-chr7:2965961..2967966,2	MCF-7	breast:
30	chr7:2921568..2923869-chr7:3228214..3231115,2	MCF-7	breast:
31	chr7:2794522..2796441-chr7:2912827..2915695,3	MCF-7	breast:
32	chr7:2907345..2909750-chr7:2913621..2916060,3	K562	blood:
33	chr7:2914055..2915867-chr7:3204506..3206043,2	MCF-7	breast:
34	chr7:2896657..2898965-chr7:2903247..2905265,2	MCF-7	breast:
35	chr7:2907345..2909750-chr7:2913621..2916060,3	K562	blood:
36	chr7:2958335..2961015-chr7:2975473..2978226,3	MCF-7	breast:
37	chr7:2726315..2729215-chr7:2912425..2915656,5	MCF-7	breast:
38	chr7:2913332..2915358-chr7:2931713..2934636,3	MCF-7	breast:
39	chr7:2901153..2903496-chr7:2907238..2910206,2	K562	blood:
40	chr7:2912265..2915088-chr7:2952209..2954245,2	K562	blood:
41	chr7:2912665..2915404-chr7:2954032..2956544,2	MCF-7	breast:
42	chr7:2872743..2875246-chr7:2912589..2914983,2	MCF-7	breast:
43	chr7:2913651..2914154-chr7:100464016..100464516,2	Hela-S3	cervix:
44	chr7:2913057..2915172-chr7:3198284..3201204,2	MCF-7	breast:
45	chr7:2913187..2915316-chr7:2934287..2938323,4	MCF-7	breast:
46	chr7:2975475..2978008-chr7:2979225..2981624,2	K562	blood:
47	chr7:2926382..2927118-chr7:3105405..3105996,2	MCF-7	breast:
48	chr7:2951702..2953400-chr7:2956754..2958330,2	K562	blood:
49	chr7:2903257..2906477-chr7:2913665..2917327,3	K562	blood:
50	chr7:2725769..2728624-chr7:2901720..2905056,3	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AMZ1-5	chr7:2931858-2932259	NONHSAT118829
2	lnc-AMZ1-4	chr7:2920040-2920279	NONHSAT118828

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CARD11	hsa-miR-155-5p	chr7:2945794-2945816
2	CARD11	hsa-miR-155-5p	chr7:2945799-2945793

Variant related genes	Relation type
CARD11	TF binding region
ENSG00000237286	TF binding region
CARD11	CpG island
ENSG00000237286	CpG island
ENSG00000217455	chromatin interactions
ENSG00000198286	chromatin interactions
ENSG00000089009	chromatin interactions
ENSG00000231892	chromatin interactions
ENSG00000173545	chromatin interactions
ENSG00000186854	chromatin interactions
ENSG00000146535	chromatin interactions
ENSG00000174945	chromatin interactions
ENSG00000236708	chromatin interactions
ENSG00000146555	chromatin interactions
ENSG00000115310	chromatin interactions

Extended variants
information (count: 4316 )
Associated
traits (count: 78 )

Variant overlapped rSNPs/rCNVs (count:4316 , 50 per page) page: 1 2 3 4 5 6 7 ... 87

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2527521	chr7:2904928-2904929	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs531785732	chr7:2904958-2904959	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs551705388	chr7:2904978-2904979	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs571779058	chr7:2905012-2905013	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs56056318	chr7:2905019-2905020	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	mRNA abundance
6	rs548139562	chr7:2905020-2905021	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs567959264	chr7:2905021-2905022	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs182152280	chr7:2905030-2905031	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs556081448	chr7:2905037-2905038	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs576057352	chr7:2905038-2905039	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs77906493	chr7:2905039-2905040	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs558487566	chr7:2905040-2905041	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs201081605	chr7:2905065-2905066	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs150839748	chr7:2905070-2905071	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs540805476	chr7:2905149-2905150	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs560894744	chr7:2905208-2905209	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs112131187	chr7:2905215-2905216	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs186711463	chr7:2905225-2905226	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs542659191	chr7:2905226-2905227	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs562874471	chr7:2905276-2905277	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs531730112	chr7:2905286-2905287	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs545520236	chr7:2905287-2905288	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs565359125	chr7:2905310-2905311	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs527939376	chr7:2905311-2905312	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs547997954	chr7:2905320-2905321	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs370323842	chr7:2905327-2905328	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs138226259	chr7:2905351-2905352	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs549531050	chr7:2905428-2905429	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs569598294	chr7:2905429-2905430	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs557551596	chr7:2905462-2905463	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs113638286	chr7:2905463-2905464	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs34398119	chr7:2905472-2905473	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs80172680	chr7:2905476-2905477	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs534517840	chr7:2905479-2905480	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs190783465	chr7:2905480-2905481	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs537477003	chr7:2905483-2905484	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs183267024	chr7:2905490-2905491	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs73033479	chr7:2905499-2905500	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs188511394	chr7:2905501-2905502	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs2398573	chr7:2905513-2905514	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs570952317	chr7:2905516-2905517	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs555636180	chr7:2905526-2905527	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs528597359	chr7:2905531-2905532	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs545073376	chr7:2905538-2905539	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs76101203	chr7:2905560-2905561	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs573811541	chr7:2905573-2905574	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs112579460	chr7:2905584-2905585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs149554736	chr7:2905626-2905627	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs542266764	chr7:2905633-2905634	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs541644699	chr7:2905668-2905669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:78)

Disease	PMID	Source
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Chordoma	21602918	CNVD
Lynch syndrome	22585707	CNVD
Follicular lymphoma	20505157	CNVD
Breast cancer	16397240	CNVD
Raine Syndrome	17924334	CNVD
Diffuse large b-cell lymphoma	21266526	CNVD
Melanoma	18172304	CNVD
Sudden cardiac death	19188705	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Glioma	18556773	CNVD
Ovarian cancer	21720365	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Developmental delay	21147756	CNVD
Prostate cancer	18632612	CNVD
Urothelial carcinoma	21177765	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Nasopharyngeal cancer	20548289	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
Spondylocostal dysostosis	21085971	CNVD
Mental retardation	17901693	CNVD
Heart disease	21282601	CNVD
Glioblastoma multiforme	22286061	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1469 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:2900600-2910400	Weak transcription	Esophagus	oesophagus
2	chr7:2901600-2905200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
3	chr7:2902000-2905000	Enhancers	NHDF-Ad	bronchial
4	chr7:2902000-2905200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr7:2902000-2905200	Enhancers	Primary B cells from peripheral blood	blood
6	chr7:2902000-2905200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr7:2902200-2905000	Enhancers	Placenta	Placenta
8	chr7:2902200-2905200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr7:2902400-2905000	Enhancers	Primary T helper cells PMA-I stimulated	--
10	chr7:2902400-2905000	Enhancers	Lung	lung
11	chr7:2902600-2905200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr7:2902600-2905200	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr7:2902600-2905200	Enhancers	Fetal Muscle Trunk	muscle
14	chr7:2902600-2905200	Enhancers	Fetal Muscle Leg	muscle
15	chr7:2902600-2905200	Enhancers	Fetal Stomach	stomach
16	chr7:2902800-2905200	Enhancers	Fetal Thymus	thymus
17	chr7:2903200-2905000	Enhancers	Brain Inferior Temporal Lobe	brain
18	chr7:2903400-2905000	Enhancers	Ovary	ovary
19	chr7:2903400-2911400	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr7:2903600-2905000	Enhancers	Brain Hippocampus Middle	brain
21	chr7:2903600-2905000	Enhancers	Colon Smooth Muscle	Colon
22	chr7:2903600-2905200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr7:2903600-2905400	Enhancers	Primary T cells fromperipheralblood	blood
24	chr7:2903600-2910000	Weak transcription	H1 Cell Line	embryonic stem cell
25	chr7:2903600-2910000	Weak transcription	Thymus	Thymus
26	chr7:2903600-2921600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr7:2903800-2905000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
28	chr7:2903800-2905000	Enhancers	Primary T helper cells fromperipheralblood	blood
29	chr7:2903800-2905000	Enhancers	Stomach Mucosa	stomach
30	chr7:2903800-2905000	Enhancers	HMEC	breast
31	chr7:2903800-2905200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr7:2903800-2905200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr7:2903800-2905200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr7:2903800-2905200	Enhancers	Colonic Mucosa	Colon
35	chr7:2903800-2905200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
36	chr7:2903800-2905400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr7:2903800-2905400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr7:2903800-2909800	Weak transcription	Left Ventricle	heart
39	chr7:2903800-2910000	Weak transcription	Pancreas	Pancrea
40	chr7:2903800-2912800	Weak transcription	Right Atrium	heart
41	chr7:2903800-2914600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
42	chr7:2903800-2915800	Weak transcription	HUES48 Cell Line	embryonic stem cell
43	chr7:2903800-2919000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr7:2904000-2905000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
45	chr7:2904000-2905000	Enhancers	Adipose Nuclei	Adipose
46	chr7:2904000-2905000	Enhancers	Skeletal Muscle Male	skeletal muscle
47	chr7:2904000-2905000	Enhancers	GM12878-XiMat	blood
48	chr7:2904000-2905000	Enhancers	HUVEC	blood vessel
49	chr7:2904000-2905000	Enhancers	NHLF	lung
50	chr7:2904000-2905200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links