Variant report

Variant	nsv887755
Chromosome Location	chr7:16509086-16542364
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:244)
CpG islands
(count:308)
Chromatin interactive
region (count:26)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:16532091-16532676	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:16511670-16511947	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:16524530-16524826	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:16514797-16514866	K562	blood:	n/a	n/a
5	ATF1	chr7:16532120-16532671	K562	blood:	n/a	n/a
6	ATF1	chr7:16524430-16524691	K562	blood:	n/a	n/a
7	BACH1	chr7:16535740-16535854	H1-hESC	embryonic stem cell:	n/a	n/a
8	BHLHE40	chr7:16532148-16532511	HepG2	liver:	n/a	n/a
9	CBX3	chr7:16541509-16541827	K562	blood:	n/a	n/a
10	CBX3	chr7:16524140-16524868	HCT-116	colon:	n/a	n/a
11	CBX3	chr7:16524126-16524955	HCT-116	colon:	n/a	n/a
12	CCNT2	chr7:16533597-16533769	K562	blood:	n/a	n/a
13	CCNT2	chr7:16532206-16532616	K562	blood:	n/a	n/a
14	CEBPB	chr7:16532330-16532712	K562	blood:	n/a	n/a
15	CEBPB	chr7:16512431-16512675	H1-hESC	embryonic stem cell:	n/a	chr7:16512530-16512541
16	CEBPB	chr7:16512388-16512703	K562	blood:	n/a	chr7:16512530-16512541
17	CEBPB	chr7:16532195-16532520	HepG2	liver:	n/a	n/a
18	CEBPB	chr7:16529660-16529787	K562	blood:	n/a	n/a
19	CEBPB	chr7:16524110-16525044	HCT-116	colon:	n/a	n/a
20	CEBPB	chr7:16511651-16511776	HepG2	liver:	n/a	n/a
21	CEBPB	chr7:16511528-16511898	HepG2	liver:	n/a	n/a
22	CEBPB	chr7:16529722-16529727	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr7:16512403-16512658	HepG2	liver:	n/a	chr7:16512530-16512541
24	CEBPB	chr7:16531125-16531360	K562	blood:	n/a	chr7:16531240-16531251
25	CEBPB	chr7:16512403-16512681	IMR90	lung:	n/a	chr7:16512530-16512541
26	CHD2	chr7:16532233-16532572	HepG2	liver:	n/a	n/a
27	CHD2	chr7:16514611-16514903	K562	blood:	n/a	n/a
28	CTCF	chr7:16511760-16511910	HRPEpiC	eye:	n/a	n/a
29	CTCF	chr7:16511780-16511930	MCF-7	breast:	n/a	n/a
30	CTCF	chr7:16511720-16511870	BE2_C	brain:	n/a	n/a
31	CTCF	chr7:16511840-16511990	HL-60	blood:	n/a	n/a
32	CTCF	chr7:16511834-16511907	HepG2	liver:	n/a	n/a
33	CTCF	chr7:16529800-16529950	GM06990	blood:	n/a	n/a
34	CTCF	chr7:16511781-16511938	MCF-7	breast:	n/a	n/a
35	CTCF	chr7:16511780-16511930	SK-N-SH_RA	brain:	n/a	n/a
36	CTCF	chr7:16513080-16513230	Caco-2	colon:	n/a	n/a
37	CTCF	chr7:16511827-16511918	Gliobla	brain:	n/a	n/a
38	CTCF	chr7:16511760-16511910	HepG2	liver:	n/a	n/a
39	CTCF	chr7:16511760-16511910	HPF	lung:	n/a	n/a
40	CTCF	chr7:16511840-16511990	AG04449	skin:	n/a	n/a
41	CTCF	chr7:16511820-16511970	HA-sp	spinal cord:	n/a	n/a
42	CTCF	chr7:16511680-16511830	HAc	cerebellar:	n/a	n/a
43	CTCF	chr7:16511760-16511910	HBMEC	blood vessel:	n/a	n/a
44	CTCF	chr7:16511920-16512070	NHDF-neo	bronchial:	n/a	n/a
45	CTCF	chr7:16511620-16511770	A549	lung:	n/a	n/a
46	CTCF	chr7:16511740-16511890	A549	lung:	n/a	n/a
47	CTCF	chr7:16511680-16511830	HCT-116	colon:	n/a	n/a
48	CTCF	chr7:16511800-16511950	HPAF	blood vessel:	n/a	n/a
49	CTCF	chr7:16511780-16511930	HCPEpiC	choroid plexus:	n/a	n/a
50	CTCF	chr7:16511820-16511970	HBMEC	blood vessel:	n/a	n/a

(count:308 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:16524513-16524563	K562	blood:	n/a
2	chr7:16511803-16511853	HUVEC	blood vessel:	n/a
3	chr7:16524513-16524563	HEEpiC	esophagus:	n/a
4	chr7:16524513-16524563	K562	blood:	n/a
5	chr7:16511803-16511853	HUVEC	blood vessel:	n/a
6	chr7:16524513-16524563	HEEpiC	esophagus:	n/a
7	chr7:16524513-16524563	AG09319	gingival:	n/a
8	chr7:16542008-16542058	U87	brain:	n/a
9	chr7:16541901-16541951	GM06990	blood:	n/a
10	chr7:16542142-16542192	Hepatocyte	liver:	n/a
11	chr7:16511803-16511853	HIPEpiC	eye:	n/a
12	chr7:16542142-16542192	NHDF-neo	bronchial:	n/a
13	chr7:16541901-16541951	MCF10A-Er-Src	breast:	n/a
14	chr7:16542142-16542192	HL-60	blood:	n/a
15	chr7:16541901-16541951	SK-N-SH	brain:	n/a
16	chr7:16541901-16541951	PANC-1	pancreas:	n/a
17	chr7:16511803-16511853	HNPCEpiC	eye:	n/a
18	chr7:16542008-16542058	HCF	heart:	n/a
19	chr7:16511803-16511853	NT2-D1	testis:	n/a
20	chr7:16524513-16524563	SKMC	muscle:	n/a
21	chr7:16524513-16524563	NH-A	brain:	n/a
22	chr7:16541901-16541951	AG04449	skin:	fetal
23	chr7:16542142-16542192	MCF-7	breast:	n/a
24	chr7:16511803-16511853	NB4	blood:	n/a
25	chr7:16524513-16524563	NHBE	bronchial:	n/a
26	chr7:16542008-16542058	NB4	blood:	n/a
27	chr7:16524513-16524563	GM12892	blood:	n/a
28	chr7:16524513-16524563	HCT-116	colon:	n/a
29	chr7:16524513-16524563	T-47D	breast:	n/a
30	chr7:16524513-16524563	NHDF-neo	bronchial:	n/a
31	chr7:16524513-16524563	HCM	heart:	n/a
32	chr7:16542008-16542058	T-47D	breast:	n/a
33	chr7:16542008-16542058	AG09319	gingival:	n/a
34	chr7:16542142-16542192	NT2-D1	testis:	n/a
35	chr7:16542008-16542058	MCF10A-Er-Src	breast:	n/a
36	chr7:16524513-16524563	HRCEpiC	kidney:	n/a
37	chr7:16541901-16541951	ECC-1	luminal epithelium:	n/a
38	chr7:16542008-16542058	SKMC	muscle:	n/a
39	chr7:16541901-16541951	GM19239	blood:	n/a
40	chr7:16524513-16524563	AG10803	skin:	n/a
41	chr7:16511803-16511853	LNCaP	prostate:	n/a
42	chr7:16511803-16511853	HCT-116	colon:	n/a
43	chr7:16541901-16541951	BJ	skin:	n/a
44	chr7:16541901-16541951	U87	brain:	n/a
45	chr7:16541901-16541951	ProgFib	skin:	n/a
46	chr7:16541901-16541951	HUVEC	blood vessel:	n/a
47	chr7:16542008-16542058	GM12892	blood:	n/a
48	chr7:16541901-16541951	AG04450	lung:	fetal
49	chr7:16511803-16511853	HCPEpiC	choroid plexus:	n/a
50	chr7:16542142-16542192	PFSK-1	brain:	n/a

(count:26 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:16541764..16543628-chr7:16604079..16606221,2	K562	blood:
2	chr7:16510217..16512329-chr7:16516477..16519268,2	K562	blood:
3	chr7:16135393..16137832-chr7:16533811..16535542,2	K562	blood:
4	chr7:16532269..16535153-chr7:16538265..16540761,2	K562	blood:
5	chr7:16526991..16528708-chr7:16530657..16533220,2	K562	blood:
6	chr7:16532204..16534776-chr7:16581975..16583734,2	K562	blood:
7	chr7:16532273..16538122-chr7:16541684..16545324,6	K562	blood:
8	chr7:16301478..16303849-chr7:16518183..16519712,2	K562	blood:
9	chr7:16531650..16533232-chr7:16685013..16686777,2	K562	blood:
10	chr7:16523356..16525070-chr7:16684503..16686838,2	MCF-7	breast:
11	chr7:16532269..16535153-chr7:16538265..16540761,2	K562	blood:
12	chr7:16536910..16539248-chr7:16549389..16552367,2	K562	blood:
13	chr7:16530699..16533769-chr7:16536615..16539765,3	K562	blood:
14	chr7:16526991..16528708-chr7:16530657..16533220,2	K562	blood:
15	chr7:16515092..16517007-chr7:16528168..16530521,2	K562	blood:
16	chr7:16530699..16533769-chr7:16536615..16539765,3	K562	blood:
17	chr7:16507602..16510153-chr7:16537013..16538604,2	K562	blood:
18	chr7:16505228..16507130-chr7:16509923..16512038,2	K562	blood:
19	chr7:16507602..16510153-chr7:16537013..16538604,2	K562	blood:
20	chr7:16504445..16506740-chr7:16521593..16524423,2	K562	blood:
21	chr7:16521718..16524070-chr7:16531143..16534278,3	K562	blood:
22	chr7:16518789..16520770-chr7:16521668..16524665,2	K562	blood:
23	chr7:16515092..16517007-chr7:16528168..16530521,2	K562	blood:
24	chr7:16521718..16524070-chr7:16531143..16534278,3	K562	blood:
25	chr7:16532273..16538122-chr7:16541684..16545324,6	K562	blood:
26	chr7:16518789..16520770-chr7:16521668..16524665,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000272537	TF binding region
SOSTDC1	TF binding region
ENSG00000272537	CpG island
SOSTDC1	CpG island
ENSG00000272537	chromatin interactions
ENSG00000136261	chromatin interactions
ENSG00000106524	chromatin interactions
ENSG00000171243	chromatin interactions

Extended variants
information (count: 1450 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:1450 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1981596	chr7:16509086-16509087	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs575176852	chr7:16509112-16509113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs114909822	chr7:16509164-16509165	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs4719467	chr7:16509301-16509302	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs58888799	chr7:16509378-16509379	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs553841656	chr7:16509382-16509383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs576908231	chr7:16509410-16509411	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs540679061	chr7:16509416-16509417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs561955539	chr7:16509584-16509585	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs545883760	chr7:16509586-16509587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs201853406	chr7:16509670-16509671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs531504191	chr7:16509671-16509672	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs201468220	chr7:16509697-16509698	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs34419537	chr7:16509716-16509717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs2528476	chr7:16509718-16509719	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs544260957	chr7:16509728-16509729	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs563213178	chr7:16509739-16509740	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs183501276	chr7:16509763-16509764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs35371535	chr7:16509775-16509776	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs552050356	chr7:16509798-16509799	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs76731637	chr7:16509835-16509836	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs371442530	chr7:16509839-16509840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs576215978	chr7:16509844-16509845	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs528205822	chr7:16509881-16509882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs78559413	chr7:16509928-16509929	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs188507787	chr7:16509931-16509932	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs199798946	chr7:16509941-16509942	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs535466362	chr7:16510011-16510012	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs193102329	chr7:16510051-16510052	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs141347616	chr7:16510252-16510253	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs539299061	chr7:16510259-16510260	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs557537266	chr7:16510279-16510280	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs146972238	chr7:16510289-16510290	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs76931819	chr7:16510290-16510291	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs185114345	chr7:16510305-16510306	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs80180121	chr7:16510308-16510309	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs574037421	chr7:16510333-16510334	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs187866957	chr7:16510335-16510336	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs148061234	chr7:16510353-16510354	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs191551614	chr7:16510354-16510355	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs12699803	chr7:16510409-16510410	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs141785223	chr7:16510442-16510443	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs150625390	chr7:16510499-16510500	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs554293190	chr7:16510601-16510602	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs561861767	chr7:16510608-16510609	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs113363044	chr7:16510621-16510622	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs550550536	chr7:16510646-16510647	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs189662857	chr7:16510656-16510657	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs181141249	chr7:16510664-16510665	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs368526873	chr7:16510675-16510676	Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Prostate cancer	16573809	CNVD
Acute myeloid leukemia	21251322	CNVD
Melanoma	17363583	CNVD
Kartagener syndrome	16639409	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Prostate cancer	19242612	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21858162	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Heart disease	21282601	CNVD
Rubinstein-Taybi syndrome	22470819	CNVD
Alzheimer''s disease	22166940	CNVD
Abnormal phenotypes	18644119	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Bladder cancer	21909424	CNVD
Cancer	21183584	CNVD
Autism	20808228	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:194 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:16501000-16511600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:16506000-16511600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:16506000-16511600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:16506000-16511600	Weak transcription	Brain Angular Gyrus	brain
5	chr7:16506200-16511600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr7:16506200-16511600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr7:16506400-16511400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr7:16506400-16511600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:16506600-16511800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr7:16506800-16511600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr7:16511200-16511400	Enhancers	Brain Substantia Nigra	brain
12	chr7:16511200-16512400	Enhancers	Brain Hippocampus Middle	brain
13	chr7:16511400-16511800	Flanking Active TSS	Brain Substantia Nigra	brain
14	chr7:16511400-16512000	Enhancers	Brain Cingulate Gyrus	brain
15	chr7:16511400-16512200	Enhancers	HepG2	liver
16	chr7:16511400-16512400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr7:16511600-16511800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
18	chr7:16511600-16511800	Enhancers	Brain Angular Gyrus	brain
19	chr7:16511600-16511800	Enhancers	Brain Anterior Caudate	brain
20	chr7:16511600-16511800	Enhancers	Brain Inferior Temporal Lobe	brain
21	chr7:16511600-16512000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr7:16511600-16512000	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr7:16511600-16512000	Enhancers	Sigmoid Colon	Sigmoid Colon
24	chr7:16511600-16512200	Enhancers	H1 Cell Line	embryonic stem cell
25	chr7:16511600-16512200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr7:16511600-16512200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr7:16511600-16512200	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr7:16511600-16512400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr7:16511600-16512400	Enhancers	Cortex derived primary cultured neurospheres	brain
30	chr7:16511600-16512400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
31	chr7:16511600-16512600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr7:16511800-16512200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
33	chr7:16511800-16512200	Enhancers	Brain Substantia Nigra	brain
34	chr7:16511800-16513000	Enhancers	Breast Myoepithelial Primary Cells	Breast
35	chr7:16512000-16512400	Enhancers	iPS-20b Cell Line	embryonic stem cell
36	chr7:16512000-16512400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr7:16512200-16512400	Enhancers	ES-I3 Cell Line	embryonic stem cell
38	chr7:16512400-16512600	Enhancers	NHDF-Ad	bronchial
39	chr7:16512400-16524200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr7:16514200-16515000	Enhancers	K562	blood
41	chr7:16517000-16517200	Enhancers	Rectal Mucosa Donor 31	rectum
42	chr7:16517200-16519200	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr7:16517600-16517800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr7:16518800-16519200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr7:16519000-16519400	Enhancers	Cortex derived primary cultured neurospheres	brain
46	chr7:16519000-16519400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
47	chr7:16519000-16519800	Enhancers	Fetal Brain Male	brain
48	chr7:16519000-16519800	Enhancers	Rectal Mucosa Donor 29	rectum
49	chr7:16519000-16520400	Enhancers	Fetal Lung	lung
50	chr7:16519200-16520000	Enhancers	Rectal Mucosa Donor 31	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links