Variant report

Variant	nsv887819
Chromosome Location	chr7:19262091-19658389
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:19531563-19531745	HepG2	liver:	n/a	n/a
2	ATF3	chr7:19401699-19402094	HCT-116	colon:	n/a	n/a
3	ATF3	chr7:19444572-19445053	A549	lung:	n/a	n/a
4	ATF3	chr7:19444493-19444867	A549	lung:	n/a	n/a
5	BACH1	chr7:19347073-19347532	H1-hESC	embryonic stem cell:	n/a	chr7:19347366-19347380
6	BACH1	chr7:19347264-19347555	K562	blood:	n/a	chr7:19347366-19347380
7	BATF	chr7:19592237-19592524	GM12878	blood:	n/a	n/a
8	BCL3	chr7:19444394-19444990	A549	lung:	n/a	chr7:19444641-19444650
9	BHLHE40	chr7:19422585-19422633	GM12878	blood:	n/a	n/a
10	BHLHE40	chr7:19602924-19603036	GM12878	blood:	n/a	n/a
11	BHLHE40	chr7:19437440-19437816	GM12878	blood:	n/a	n/a
12	CBX3	chr7:19444505-19444941	HCT-116	colon:	n/a	n/a
13	CCNT2	chr7:19537710-19537830	K562	blood:	n/a	n/a
14	CEBPB	chr7:19625426-19625754	Hela-S3	cervix:	n/a	chr7:19625573-19625582 chr7:19625678-19625690 chr7:19625572-19625583 chr7:19625675-19625692 chr7:19625571-19625582 chr7:19625571-19625584
15	CEBPB	chr7:19600714-19601111	ECC-1	luminal epithelium:	n/a	n/a
16	CEBPB	chr7:19625412-19625755	HepG2	liver:	n/a	chr7:19625573-19625582 chr7:19625678-19625690 chr7:19625572-19625583 chr7:19625675-19625692 chr7:19625571-19625582 chr7:19625571-19625584
17	CEBPB	chr7:19334186-19334532	IMR90	lung:	n/a	chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360 chr7:19334351-19334360 chr7:19334350-19334361 chr7:19334351-19334360 chr7:19334349-19334362 chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360
18	CEBPB	chr7:19291368-19291588	A549	lung:	n/a	chr7:19291449-19291458 chr7:19291448-19291459 chr7:19291449-19291458 chr7:19291447-19291458 chr7:19291449-19291458 chr7:19291449-19291458
19	CEBPB	chr7:19656927-19657118	HepG2	liver:	n/a	chr7:19656976-19656987
20	CEBPB	chr7:19600736-19601079	HCT-116	colon:	n/a	n/a
21	CEBPB	chr7:19372759-19372985	IMR90	lung:	n/a	chr7:19372865-19372873 chr7:19372900-19372913
22	CEBPB	chr7:19291345-19291589	Hela-S3	cervix:	n/a	chr7:19291449-19291458 chr7:19291448-19291459 chr7:19291449-19291458 chr7:19291447-19291458 chr7:19291449-19291458 chr7:19291449-19291458
23	CEBPB	chr7:19600706-19601071	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr7:19379927-19380128	A549	lung:	n/a	n/a
25	CEBPB	chr7:19509336-19509608	IMR90	lung:	n/a	chr7:19509476-19509487
26	CEBPB	chr7:19295352-19295559	HepG2	liver:	n/a	n/a
27	CEBPB	chr7:19431952-19432321	IMR90	lung:	n/a	n/a
28	CEBPB	chr7:19625429-19625740	A549	lung:	n/a	chr7:19625573-19625582 chr7:19625678-19625690 chr7:19625572-19625583 chr7:19625675-19625692 chr7:19625571-19625582 chr7:19625571-19625584
29	CEBPB	chr7:19334183-19334506	HepG2	liver:	n/a	chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360 chr7:19334351-19334360 chr7:19334350-19334361 chr7:19334351-19334360 chr7:19334349-19334362 chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360
30	CEBPB	chr7:19600750-19601061	HepG2	liver:	n/a	n/a
31	CEBPB	chr7:19477072-19477270	IMR90	lung:	n/a	n/a
32	CEBPB	chr7:19446082-19446303	A549	lung:	n/a	n/a
33	CEBPB	chr7:19297107-19297325	HepG2	liver:	n/a	chr7:19297180-19297191
34	CEBPB	chr7:19600718-19601073	IMR90	lung:	n/a	n/a
35	CEBPB	chr7:19600806-19601125	HCT-116	colon:	n/a	n/a
36	CEBPB	chr7:19547865-19548172	ECC-1	luminal epithelium:	n/a	n/a
37	CEBPB	chr7:19444404-19445628	A549	lung:	n/a	chr7:19445336-19445347
38	CEBPB	chr7:19316101-19316387	IMR90	lung:	n/a	chr7:19316254-19316265
39	CEBPB	chr7:19334172-19334510	ECC-1	luminal epithelium:	n/a	chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360 chr7:19334351-19334360 chr7:19334350-19334361 chr7:19334351-19334360 chr7:19334349-19334362 chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360
40	CEBPB	chr7:19401780-19402111	Hela-S3	cervix:	n/a	n/a
41	CEBPB	chr7:19643099-19643309	HepG2	liver:	n/a	n/a
42	CEBPB	chr7:19509394-19509590	A549	lung:	n/a	chr7:19509476-19509487
43	CEBPB	chr7:19295359-19295597	IMR90	lung:	n/a	n/a
44	CEBPB	chr7:19444478-19444920	A549	lung:	n/a	n/a
45	CEBPB	chr7:19263303-19263518	A549	lung:	n/a	chr7:19263419-19263430
46	CEBPB	chr7:19600732-19601085	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr7:19291410-19291580	H1-hESC	embryonic stem cell:	n/a	chr7:19291449-19291458 chr7:19291448-19291459 chr7:19291449-19291458 chr7:19291447-19291458 chr7:19291449-19291458 chr7:19291449-19291458
48	CEBPB	chr7:19334241-19334479	Hela-S3	cervix:	n/a	chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360 chr7:19334351-19334360 chr7:19334350-19334361 chr7:19334351-19334360 chr7:19334349-19334362 chr7:19334349-19334362 chr7:19334351-19334360 chr7:19334349-19334360
49	CEBPB	chr7:19643145-19643189	A549	lung:	n/a	n/a
50	CEBPB	chr7:19444511-19445576	Hela-S3	cervix:	n/a	chr7:19445336-19445347

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:19453933-19453983	HEEpiC	esophagus:	n/a
2	chr7:19443825-19443875	MCF-7	breast:	n/a
3	chr7:19577822-19577872	HNPCEpiC	eye:	n/a
4	chr7:19443825-19443875	AoSMC	blood vessel:	n/a
5	chr7:19417585-19417635	BJ	skin:	n/a
6	chr7:19443825-19443875	HCT-116	colon:	n/a
7	chr7:19408343-19408393	PrEC	prostate:	n/a
8	chr7:19453933-19453983	AG04449	skin:	fetal
9	chr7:19417585-19417635	GM19239	blood:	n/a
10	chr7:19408343-19408393	HAEpiC	amniotic membrane:	n/a
11	chr7:19443825-19443875	AG09319	gingival:	n/a
12	chr7:19443825-19443875	ovcar-3	ovarian:	n/a
13	chr7:19408343-19408393	NB4	blood:	n/a
14	chr7:19408343-19408393	SK-N-SH	brain:	n/a
15	chr7:19548878-19548928	RPTEC	kidney:	n/a
16	chr7:19417585-19417635	ProgFib	skin:	n/a
17	chr7:19443825-19443875	HAEpiC	amniotic membrane:	n/a
18	chr7:19443825-19443875	AG04449	skin:	fetal
19	chr7:19577822-19577872	GM06990	blood:	n/a
20	chr7:19443825-19443875	HepG2	liver:	n/a
21	chr7:19453933-19453983	AoSMC	blood vessel:	n/a
22	chr7:19548878-19548928	HUVEC	blood vessel:	n/a
23	chr7:19417585-19417635	NHDF-neo	bronchial:	n/a
24	chr7:19408343-19408393	NT2-D1	testis:	n/a
25	chr7:19417585-19417635	HPAEpiC	pulmonary alveolar:	n/a
26	chr7:19408343-19408393	HCM	heart:	n/a
27	chr7:19548878-19548928	SAEC	small airway:	n/a
28	chr7:19577822-19577872	Caco-2	colon:	n/a
29	chr7:19453933-19453983	NB4	blood:	n/a
30	chr7:19453933-19453983	HEK293	kidney:	embryo
31	chr7:19548878-19548928	ECC-1	luminal epithelium:	n/a
32	chr7:19408343-19408393	K562	blood:	n/a
33	chr7:19453933-19453983	H1-hESC	embryonic stem cell:	embryo
34	chr7:19577822-19577872	PANC-1	pancreas:	n/a
35	chr7:19443825-19443875	HPAEpiC	pulmonary alveolar:	n/a
36	chr7:19443825-19443875	SAEC	small airway:	n/a
37	chr7:19548878-19548928	Caco-2	colon:	n/a
38	chr7:19408343-19408393	HepG2	liver:	n/a
39	chr7:19577822-19577872	AG10803	skin:	n/a
40	chr7:19577822-19577872	HAEpiC	amniotic membrane:	n/a
41	chr7:19453933-19453983	PANC-1	pancreas:	n/a
42	chr7:19548878-19548928	HCPEpiC	choroid plexus:	n/a
43	chr7:19548878-19548928	GM12878	blood:	n/a
44	chr7:19453933-19453983	K562	blood:	n/a
45	chr7:19417585-19417635	HMEC	breast:	n/a
46	chr7:19417585-19417635	AG04449	skin:	fetal
47	chr7:19443825-19443875	HMEC	breast:	n/a
48	chr7:19577822-19577872	SAEC	small airway:	n/a
49	chr7:19417585-19417635	MCF10A-Er-Src	breast:	n/a
50	chr7:19417585-19417635	MCF-7	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:19400460..19402875-chr7:19412134..19413923,2	K562	blood:
2	chr7:19552748..19555589-chr7:19559461..19562039,2	K562	blood:
3	chr2:135445671..135446510-chr7:19643090..19643903,2	MCF-7	breast:
4	chr7:19641533..19643172-chr7:19643344..19645387,2	K562	blood:
5	chr7:19610590..19613391-chr7:19614778..19616457,3	K562	blood:
6	chr7:19502491..19504536-chr7:19508124..19510768,2	K562	blood:
7	chr7:19610590..19613391-chr7:19614778..19616457,3	K562	blood:
8	chr7:19429082..19431210-chr7:19440295..19442664,2	K562	blood:
9	chr7:19641533..19643172-chr7:19643344..19645387,2	K562	blood:
10	chr1:102456863..102457700-chr7:19592037..19592862,2	MCF-7	breast:
11	chr14:53017346..53020314-chr7:19356752..19358807,2	MCF-7	breast:
12	chr7:19429082..19431210-chr7:19440295..19442664,2	K562	blood:
13	chr7:18732759..18733606-chr7:19591000..19591516,2	MCF-7	breast:
14	chr7:19161356..19162289-chr7:19481424..19482541,6	MCF-7	breast:
15	chr7:19502491..19504536-chr7:19508124..19510768,2	K562	blood:
16	chr7:19329990..19331795-chr7:19331809..19334406,3	K562	blood:
17	chr7:19329990..19331795-chr7:19331809..19334406,3	K562	blood:
18	chr7:19400460..19402875-chr7:19412134..19413923,2	K562	blood:
19	chr7:19552748..19555589-chr7:19559461..19562039,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-HDAC9-12	chr7:19360888-19361033	NONHSAT119386
2	lnc-HDAC9-5	chr7:19615910-19616041	ENSG00000223838
3	lnc-HDAC9-12	chr7:19584677-19584754	NONHSAT119386
4	lnc-HDAC9-5	chr7:19393157-19393264	ENSG00000223838
5	lnc-HDAC9-5	chr7:19618152-19618229	ENSG00000223838
6	lnc-HDAC9-12	chr7:19411480-19411518	NONHSAT119386
7	lnc-HDAC9-12	chr7:19409849-19409911	NONHSAT119386
8	lnc-HDAC9-12	chr7:19582435-19582566	NONHSAT119386
9	lnc-HDAC9-5	chr7:19394363-19394508	ENSG00000223838
10	lnc-HDAC9-5	chr7:19444955-19444993	ENSG00000223838
11	lnc-HDAC9-12	chr7:19359682-19359789	NONHSAT119386
12	lnc-HDAC9-5	chr7:19443324-19443386	ENSG00000223838

Variant related genes	Relation type
ENSG00000223838	TF binding region
ENSG00000223838	CpG island
ENSG00000180998	chromatin interactions
ENSG00000087301	chromatin interactions

Extended variants
information (count: 10491 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:10491 , 50 per page) page: 1 2 3 4 5 6 7 ... 210

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543930982	chr7:19264403-19264404	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs555882389	chr7:19264408-19264409	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs11981058	chr7:19264456-19264457	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs369455206	chr7:19264470-19264471	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs567785652	chr7:19264476-19264477	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs532587989	chr7:19264483-19264484	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs141475085	chr7:19264491-19264492	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs6945560	chr7:19264504-19264505	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs539226654	chr7:19264519-19264520	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs530345604	chr7:19264521-19264522	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs150812840	chr7:19264592-19264593	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs190003632	chr7:19264622-19264623	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs530511754	chr7:19264644-19264645	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs552295343	chr7:19264663-19264664	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs139895261	chr7:19264671-19264672	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs369794807	chr7:19264677-19264678	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs181249939	chr7:19264716-19264717	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs185609715	chr7:19264779-19264780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs189698733	chr7:19264789-19264790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs183010732	chr7:19264797-19264798	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs557179286	chr7:19264809-19264810	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs145625085	chr7:19264828-19264829	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs543551554	chr7:19264829-19264830	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs558965795	chr7:19264840-19264841	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs117806382	chr7:19264850-19264851	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs188609999	chr7:19264856-19264857	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs10268652	chr7:19264888-19264889	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs576007569	chr7:19264913-19264914	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs192304157	chr7:19264937-19264938	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs183313169	chr7:19264951-19264952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs563535813	chr7:19264968-19264969	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs373253195	chr7:19264989-19264990	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs144475766	chr7:19265027-19265028	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs531085058	chr7:19265031-19265032	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs552504990	chr7:19265059-19265060	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs570493123	chr7:19265063-19265064	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs147335450	chr7:19265082-19265083	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs143365991	chr7:19265091-19265092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs546597462	chr7:19265092-19265093	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs528492911	chr7:19265108-19265109	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs535496724	chr7:19265148-19265149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs539328508	chr7:19265808-19265809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs537859215	chr7:19265839-19265840	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs551572134	chr7:19265847-19265848	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs73085322	chr7:19265874-19265875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs369105010	chr7:19265880-19265881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs142114476	chr7:19265881-19265882	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs568586187	chr7:19265883-19265884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs7785062	chr7:19265893-19265894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs73314113	chr7:19266022-19266023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Prostate cancer	16573809	CNVD
Acute myeloid leukemia	21251322	CNVD
Kartagener syndrome	16639409	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Prostate cancer	19242612	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21858162	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Heart disease	21282601	CNVD
Rubinstein-Taybi syndrome	22470819	CNVD
Alzheimer''s disease	22166940	CNVD
Abnormal phenotypes	18644119	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Cancer	21183584	CNVD
Autism	20808228	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
abnormal development	18461090	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Myelofibrosis	22110671	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:890 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:19264400-19265200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr7:19265800-19266200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr7:19266200-19266600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr7:19266600-19268600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr7:19275200-19275400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr7:19275600-19277200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr7:19279200-19279600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr7:19287200-19287400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:19287400-19288400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr7:19287800-19288600	Enhancers	Muscle Satellite Cultured Cells	--
11	chr7:19287800-19288600	Enhancers	Osteobl	bone
12	chr7:19287800-19289400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr7:19288000-19290000	Enhancers	HSMM	muscle
14	chr7:19288200-19288600	Enhancers	Fetal Heart	heart
15	chr7:19288400-19288800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr7:19288400-19288800	Enhancers	Dnd41	blood
17	chr7:19288600-19288800	Flanking Active TSS	Fetal Heart	heart
18	chr7:19288600-19288800	Flanking Active TSS	Osteobl	bone
19	chr7:19288600-19289200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr7:19288600-19289400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr7:19288600-19289400	Enhancers	NH-A	brain
22	chr7:19288600-19289600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr7:19288600-19289800	Enhancers	HSMMtube	muscle
24	chr7:19288800-19289000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
25	chr7:19288800-19289000	Enhancers	Osteobl	bone
26	chr7:19288800-19289800	Enhancers	Fetal Heart	heart
27	chr7:19289000-19289200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr7:19289000-19289200	Flanking Active TSS	Osteobl	bone
29	chr7:19289200-19289400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr7:19289200-19289800	Enhancers	Osteobl	bone
31	chr7:19289400-19289800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr7:19289400-19290000	Enhancers	Muscle Satellite Cultured Cells	--
33	chr7:19295400-19297000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
34	chr7:19296200-19296800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr7:19304800-19305200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr7:19308000-19308200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr7:19308200-19308400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr7:19308200-19308400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr7:19308200-19308400	Enhancers	Osteobl	bone
40	chr7:19308200-19309000	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr7:19308200-19309200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr7:19308200-19309400	Enhancers	Muscle Satellite Cultured Cells	--
43	chr7:19308400-19308600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
44	chr7:19308400-19308800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr7:19308400-19308800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr7:19308400-19308800	Flanking Active TSS	Osteobl	bone
47	chr7:19308400-19309000	Enhancers	HSMM	muscle
48	chr7:19308600-19309200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr7:19308800-19309000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr7:19308800-19309000	Active TSS	Osteobl	bone

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links