Variant report

Variant	nsv887854
Chromosome Location	chr7:26238100-26248965
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1312)
CpG islands
(count:1405)
Chromatin interactive
region (count:142)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1312 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:26240229-26241396	HepG2	liver:	n/a	chr7:26241058-26241066
2	ARID3A	chr7:26239009-26240013	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:26237645-26240934	K562	blood:	n/a	n/a
4	ARID3A	chr7:26237364-26238112	HepG2	liver:	n/a	n/a
5	ATF1	chr7:26240214-26241459	K562	blood:	n/a	chr7:26240423-26240437
6	ATF2	chr7:26238593-26241105	H1-hESC	embryonic stem cell:	n/a	chr7:26240423-26240437
7	ATF2	chr7:26239389-26241173	GM12878	blood:	n/a	chr7:26240423-26240437
8	ATF2	chr7:26238799-26241193	H1-hESC	embryonic stem cell:	n/a	chr7:26240423-26240437
9	ATF2	chr7:26237987-26238603	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr7:26239235-26241418	GM12878	blood:	n/a	chr7:26240423-26240437
11	ATF3	chr7:26239741-26240497	A549	lung:	n/a	n/a
12	ATF3	chr7:26240144-26240758	K562	blood:	n/a	n/a
13	ATF3	chr7:26240677-26241174	A549	lung:	n/a	n/a
14	ATF3	chr7:26239344-26240799	A549	lung:	n/a	n/a
15	BACH1	chr7:26246622-26246670	K562	blood:	n/a	n/a
16	BACH1	chr7:26239432-26240344	K562	blood:	n/a	n/a
17	BACH1	chr7:26240239-26242359	H1-hESC	embryonic stem cell:	n/a	n/a
18	BCL11A	chr7:26240808-26241385	GM12878	blood:	n/a	n/a
19	BCL11A	chr7:26240093-26240458	GM12878	blood:	n/a	n/a
20	BCL3	chr7:26239873-26241142	A549	lung:	n/a	n/a
21	BCL3	chr7:26238938-26240758	A549	lung:	n/a	n/a
22	BCL3	chr7:26240870-26241538	GM12878	blood:	n/a	chr7:26241388-26241397
23	BCL3	chr7:26240019-26240600	K562	blood:	n/a	n/a
24	BCL3	chr7:26240120-26240494	GM12878	blood:	n/a	n/a
25	BCL3	chr7:26237613-26238833	A549	lung:	n/a	n/a
26	BCL3	chr7:26239335-26239748	A549	lung:	n/a	n/a
27	BCLAF1	chr7:26238854-26240657	GM12878	blood:	n/a	n/a
28	BCLAF1	chr7:26239878-26240489	K562	blood:	n/a	n/a
29	BCLAF1	chr7:26240661-26241591	GM12878	blood:	n/a	chr7:26241388-26241397
30	BCLAF1	chr7:26240786-26241613	GM12878	blood:	n/a	chr7:26241388-26241397
31	BCLAF1	chr7:26238925-26241630	K562	blood:	n/a	chr7:26241388-26241397
32	BCLAF1	chr7:26239392-26240604	GM12878	blood:	n/a	n/a
33	BHLHE40	chr7:26238388-26238394	GM12878	blood:	n/a	n/a
34	BHLHE40	chr7:26239673-26242127	HepG2	liver:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
35	BHLHE40	chr7:26239435-26242156	K562	blood:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
36	BHLHE40	chr7:26239612-26242521	GM12878	blood:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
37	BRCA1	chr7:26239752-26240510	GM12878	blood:	n/a	n/a
38	BRCA1	chr7:26242026-26242037	HepG2	liver:	n/a	n/a
39	BRCA1	chr7:26238909-26239353	Hela-S3	cervix:	n/a	n/a
40	BRCA1	chr7:26240886-26241138	GM12878	blood:	n/a	n/a
41	BRCA1	chr7:26242065-26242856	Hela-S3	cervix:	n/a	n/a
42	BRCA1	chr7:26241407-26241502	HepG2	liver:	n/a	n/a
43	BRCA1	chr7:26239566-26239758	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr7:26240123-26241543	Hela-S3	cervix:	n/a	n/a
45	BRCA1	chr7:26240844-26241037	HepG2	liver:	n/a	n/a
46	BRCA1	chr7:26241350-26241616	GM12878	blood:	n/a	n/a
47	CBX3	chr7:26239662-26241268	K562	blood:	n/a	n/a
48	CBX3	chr7:26241276-26241662	K562	blood:	n/a	n/a
49	CCNT2	chr7:26242497-26242902	K562	blood:	n/a	n/a
50	CCNT2	chr7:26237794-26242144	K562	blood:	n/a	chr7:26241755-26241764 chr7:26241718-26241727 chr7:26241531-26241540 chr7:26241723-26241732 chr7:26241536-26241545

(count:1405 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:26240470-26240520	GM12892	blood:	n/a
2	chr7:26240939-26240989	ovcar-3	ovarian:	n/a
3	chr7:26240470-26240520	GM12892	blood:	n/a
4	chr7:26240939-26240989	ovcar-3	ovarian:	n/a
5	chr7:26242932-26242982	Hepatocyte	liver:	n/a
6	chr7:26240458-26240508	HAEpiC	amniotic membrane:	n/a
7	chr7:26241055-26241105	AG10803	skin:	n/a
8	chr7:26240443-26240493	RPTEC	kidney:	n/a
9	chr7:26240470-26240520	HNPCEpiC	eye:	n/a
10	chr7:26240560-26240610	Hela-S3	cervix:	n/a
11	chr7:26241055-26241105	HepG2	liver:	n/a
12	chr7:26241055-26241105	Jurkat	blood:	n/a
13	chr7:26240523-26240573	GM19239	blood:	n/a
14	chr7:26240675-26240725	IMR90	lung:	fetal
15	chr7:26240939-26240989	NHBE	bronchial:	n/a
16	chr7:26240087-26240137	HMEC	breast:	n/a
17	chr7:26240087-26240137	HUVEC	blood vessel:	n/a
18	chr7:26241406-26241456	HRPEpiC	eye:	n/a
19	chr7:26240939-26240989	BE2_C	brain:	n/a
20	chr7:26241406-26241456	HAEpiC	amniotic membrane:	n/a
21	chr7:26239440-26239490	PANC-1	pancreas:	n/a
22	chr7:26242932-26242982	HL-60	blood:	n/a
23	chr7:26240901-26240951	ovcar-3	ovarian:	n/a
24	chr7:26242932-26242982	ovcar-3	ovarian:	n/a
25	chr7:26239563-26239613	HCT-116	colon:	n/a
26	chr7:26240675-26240725	PANC-1	pancreas:	n/a
27	chr7:26241504-26241554	HCT-116	colon:	n/a
28	chr7:26240087-26240137	GM06990	blood:	n/a
29	chr7:26240458-26240508	ovcar-3	ovarian:	n/a
30	chr7:26241055-26241105	ECC-1	luminal epithelium:	n/a
31	chr7:26240901-26240951	Hela-S3	cervix:	n/a
32	chr7:26240939-26240989	Jurkat	blood:	n/a
33	chr7:26241406-26241456	T-47D	breast:	n/a
34	chr7:26240901-26240951	NHBE	bronchial:	n/a
35	chr7:26240574-26240624	PrEC	prostate:	n/a
36	chr7:26240939-26240989	NHDF-neo	bronchial:	n/a
37	chr7:26240458-26240508	Jurkat	blood:	n/a
38	chr7:26240903-26240953	HMEC	breast:	n/a
39	chr7:26239239-26239289	HCM	heart:	n/a
40	chr7:26241055-26241105	Hela-S3	cervix:	n/a
41	chr7:26240675-26240725	Jurkat	blood:	n/a
42	chr7:26239239-26239289	Hepatocyte	liver:	n/a
43	chr7:26240574-26240624	SK-N-SH	brain:	n/a
44	chr7:26241504-26241554	HCF	heart:	n/a
45	chr7:26240574-26240624	A549	lung:	n/a
46	chr7:26241406-26241456	MCF-7	breast:	n/a
47	chr7:26240443-26240493	ECC-1	luminal epithelium:	n/a
48	chr7:26240523-26240573	HAEpiC	amniotic membrane:	n/a
49	chr7:26241071-26241121	HCM	heart:	n/a
50	chr7:26240458-26240508	AG09319	gingival:	n/a

(count:142 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr4:6988415..6989407-chr7:26241102..26241602,2	Hela-S3	cervix:
2	chr3:195808089..195808909-chr7:26239810..26240342,2	Hela-S3	cervix:
3	chr7:26191482..26195412-chr7:26238481..26241782,5	MCF-7	breast:
4	chr7:26189582..26191145-chr7:26243499..26245167,2	K562	blood:
5	chr7:26239743..26240406-chr9:20683808..20684602,2	NB4	blood:
6	chr7:26240504..26242868-chr7:26414665..26416985,3	MCF-7	breast:
7	chr10:90595173..90596030-chr7:26237548..26238302,2	MCF-7	breast:
8	chr7:26239924..26240652-chr9:14314130..14315107,2	Hela-S3	cervix:
9	chr10:79685769..79686630-chr7:26240074..26240975,2	Hela-S3	cervix:
10	chr11:76155248..76156126-chr7:26237373..26238334,2	Hela-S3	cervix:
11	chr20:43594796..43595718-chr7:26239835..26240809,2	Hela-S3	cervix:
12	chr19:49468169..49468865-chr7:26241008..26241813,2	Hela-S3	cervix:
13	chr19:34745443..34746157-chr7:26241322..26241946,2	Hela-S3	cervix:
14	chr7:26185994..26190276-chr7:26237355..26239722,4	K562	blood:
15	chr10:43901751..43904156-chr7:26239345..26241405,2	K562	blood:
16	chr15:65588224..65589308-chr7:26239943..26240916,3	Hela-S3	cervix:
17	chr7:26190149..26194223-chr7:26238891..26242307,10	MCF-7	breast:
18	chr12:110010777..110011505-chr7:26239952..26240920,2	Hela-S3	cervix:
19	chr11:62607633..62609133-chr7:26239521..26241061,2	K562	blood:
20	chr17:33307841..33308707-chr7:26240108..26240714,2	Hela-S3	cervix:
21	chr7:26238387..26240189-chr7:26396014..26397576,2	MCF-7	breast:
22	chr1:16840486..16841080-chr7:26240022..26240793,2	HCT-116	colon:
23	chr17:78518626..78519126-chr7:26241370..26242337,2	NB4	blood:
24	chr2:27994146..27995072-chr7:26239372..26239915,2	Hela-S3	cervix:
25	chr20:61273225..61273955-chr7:26243356..26243856,2	Hela-S3	cervix:
26	chr7:26240189..26242389-chr7:26313126..26315933,2	MCF-7	breast:
27	chr17:1620010..1620539-chr7:26240863..26241470,2	Hela-S3	cervix:
28	chr17:41322356..41323038-chr7:26239670..26240376,2	Hela-S3	cervix:
29	chr11:64007751..64008560-chr7:26240100..26240712,2	Hela-S3	cervix:
30	chr7:26238730..26241133-chr7:139024277..139026837,2	K562	blood:
31	chr7:26237070..26238753-chr7:26328239..26331209,2	MCF-7	breast:
32	chr2:26256338..26257133-chr7:26239844..26240418,2	Hela-S3	cervix:
33	chr2:47630144..47631042-chr7:26240246..26240807,2	Hela-S3	cervix:
34	chr7:26240253..26241081-chr7:98741273..98742046,2	Hela-S3	cervix:
35	chr2:105654731..105655647-chr7:26239723..26240386,2	Hela-S3	cervix:
36	chr7:26248545..26251073-chr7:26252692..26255530,3	MCF-7	breast:
37	chr10:32344550..32345441-chr7:26239898..26240496,2	Hela-S3	cervix:
38	chr7:26238219..26243115-chr7:26329445..26335775,8	MCF-7	breast:
39	chr17:79849226..79850154-chr7:26239906..26240558,2	Hela-S3	cervix:
40	chr5:68628124..68628638-chr7:26237905..26238728,2	Hela-S3	cervix:
41	chr7:26238752..26241126-chr7:26401530..26405700,5	MCF-7	breast:
42	chr1:154947092..154947828-chr7:26240057..26240643,2	Hela-S3	cervix:
43	chr11:313579..314474-chr7:26240970..26241885,3	NB4	blood:
44	chr19:2475688..2476509-chr7:26239511..26240463,2	Hela-S3	cervix:
45	chr7:26206391..26208295-chr7:26237571..26240360,2	MCF-7	breast:
46	chr7:26241333..26241864-chrX:15692264..15693108,2	NB4	blood:
47	chr6:17705801..17708591-chr7:26239203..26241423,2	K562	blood:
48	chr7:26238011..26242916-chr7:26400117..26407916,12	MCF-7	breast:
49	chr13:52026864..52027624-chr7:26240034..26240676,2	NB4	blood:
50	chr7:26212301..26214165-chr7:26238438..26240076,2	MCF-7	breast:

No data

Variant related genes	Relation type
CBX3	TF binding region
HNRNPA2B1	TF binding region
CBX3	CpG island
HNRNPA2B1	CpG island
ENSG00000113522	chromatin interactions
ENSG00000063046	chromatin interactions
ENSG00000171223	chromatin interactions
ENSG00000106351	chromatin interactions
ENSG00000272269	chromatin interactions
ENSG00000227477	chromatin interactions
ENSG00000099860	chromatin interactions
ENSG00000110628	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000146963	chromatin interactions
ENSG00000270022	chromatin interactions
ENSG00000050344	chromatin interactions
ENSG00000180198	chromatin interactions
ENSG00000144560	chromatin interactions
ENSG00000141552	chromatin interactions
ENSG00000007341	chromatin interactions
ENSG00000163162	chromatin interactions
ENSG00000162976	chromatin interactions
ENSG00000143590	chromatin interactions
ENSG00000110514	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000181222	chromatin interactions
ENSG00000084754	chromatin interactions
ENSG00000121989	chromatin interactions
ENSG00000138668	chromatin interactions
ENSG00000198270	chromatin interactions
ENSG00000120742	chromatin interactions
ENSG00000116489	chromatin interactions
ENSG00000267002	chromatin interactions
ENSG00000101187	chromatin interactions
ENSG00000174004	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000185033	chromatin interactions
ENSG00000074071	chromatin interactions
ENSG00000120306	chromatin interactions
ENSG00000137500	chromatin interactions
ENSG00000086015	chromatin interactions
ENSG00000197774	chromatin interactions
ENSG00000095794	chromatin interactions
ENSG00000226752	chromatin interactions
ENSG00000143878	chromatin interactions
ENSG00000224509	chromatin interactions
ENSG00000201801	chromatin interactions
ENSG00000197299	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000163964	chromatin interactions
ENSG00000174282	chromatin interactions
ENSG00000113407	chromatin interactions
ENSG00000173207	chromatin interactions
ENSG00000171150	chromatin interactions
ENSG00000172493	chromatin interactions
ENSG00000086300	chromatin interactions
ENSG00000087086	chromatin interactions
ENSG00000215014	chromatin interactions
ENSG00000151208	chromatin interactions
ENSG00000232383	chromatin interactions
ENSG00000164898	chromatin interactions
ENSG00000147862	chromatin interactions
ENSG00000230534	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000100227	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000134046	chromatin interactions
ENSG00000198742	chromatin interactions
ENSG00000225697	chromatin interactions
ENSG00000268189	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000139428	chromatin interactions
ENSG00000263072	chromatin interactions
ENSG00000214188	chromatin interactions
ENSG00000169813	chromatin interactions
ENSG00000267680	chromatin interactions
ENSG00000255135	chromatin interactions
ENSG00000168803	chromatin interactions
ENSG00000166398	chromatin interactions
ENSG00000170759	chromatin interactions
ENSG00000249915	chromatin interactions
ENSG00000199085	chromatin interactions
ENSG00000206652	chromatin interactions
ENSG00000067225	chromatin interactions
ENSG00000225792	chromatin interactions
ENSG00000166451	chromatin interactions
ENSG00000186312	chromatin interactions
ENSG00000132680	chromatin interactions
ENSG00000085644	chromatin interactions
ENSG00000269955	chromatin interactions
ENSG00000132405	chromatin interactions
ENSG00000255234	chromatin interactions
ENSG00000095002	chromatin interactions
ENSG00000095261	chromatin interactions
ENSG00000234444	chromatin interactions
ENSG00000188352	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000183684	chromatin interactions
ENSG00000160075	chromatin interactions
ENSG00000183323	chromatin interactions
ENSG00000189143	chromatin interactions
ENSG00000120833	chromatin interactions
ENSG00000158636	chromatin interactions
ENSG00000141564	chromatin interactions
ENSG00000168806	chromatin interactions
ENSG00000065243	chromatin interactions
ENSG00000196542	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000145860	chromatin interactions
ENSG00000170515	chromatin interactions
ENSG00000101109	chromatin interactions
ENSG00000120733	chromatin interactions
ENSG00000167460	chromatin interactions
ENSG00000235159	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000248925	chromatin interactions
ENSG00000184898	chromatin interactions
ENSG00000103121	chromatin interactions
ENSG00000188554	chromatin interactions
ENSG00000243147	chromatin interactions
ENSG00000186594	chromatin interactions
ENSG00000168924	chromatin interactions
ENSG00000185885	chromatin interactions
ENSG00000220785	chromatin interactions
ENSG00000266430	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000084733	chromatin interactions
ENSG00000227071	chromatin interactions
ENSG00000095380	chromatin interactions
ENSG00000173486	chromatin interactions
ENSG00000138029	chromatin interactions
ENSG00000017260	chromatin interactions
ENSG00000132141	chromatin interactions
ENSG00000124789	chromatin interactions
ENSG00000259736	chromatin interactions
ENSG00000110921	chromatin interactions

Extended variants
information (count: 667 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:667 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs6968551	chr7:26238100-26238101	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs368344334	chr7:26238109-26238110	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
3	rs192457448	chr7:26238124-26238125	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
4	rs574067072	chr7:26238150-26238151	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
5	rs536613883	chr7:26238164-26238165	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
6	rs140882337	chr7:26238167-26238168	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
7	rs371329426	chr7:26238169-26238170	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
8	rs183845127	chr7:26238182-26238183	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
9	rs569002930	chr7:26238243-26238244	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
10	rs148484588	chr7:26238258-26238259	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
11	rs34842104	chr7:26238263-26238264	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	10 gene(s)	Overlapped CNVs	n/a
12	rs187871147	chr7:26238308-26238309	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
13	rs372685207	chr7:26238311-26238312	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
14	rs190617659	chr7:26238348-26238349	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
15	rs182577115	chr7:26238365-26238366	Transcr. at gene 5' and 3' Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
16	rs186901871	chr7:26238412-26238413	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
17	rs560817485	chr7:26238415-26238416	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
18	rs529665221	chr7:26238422-26238423	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
19	rs548013884	chr7:26238429-26238430	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
20	rs373405317	chr7:26238431-26238432	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
21	rs568003210	chr7:26238453-26238454	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
22	rs563051032	chr7:26238467-26238468	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
23	rs532097138	chr7:26238485-26238486	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
24	rs551995773	chr7:26238518-26238519	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
25	rs191587064	chr7:26238525-26238526	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
26	rs533880356	chr7:26238550-26238551	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
27	rs558829037	chr7:26238553-26238554	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
28	rs528022778	chr7:26238567-26238568	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
29	rs377261520	chr7:26238574-26238575	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
30	rs553305023	chr7:26238592-26238593	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
31	rs567930646	chr7:26238623-26238624	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
32	rs536649560	chr7:26238627-26238628	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
33	rs183029784	chr7:26238635-26238636	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
34	rs188366618	chr7:26238641-26238642	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
35	rs538736604	chr7:26238648-26238649	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
36	rs111369468	chr7:26238654-26238655	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
37	rs372931366	chr7:26238715-26238716	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
38	rs142644939	chr7:26238718-26238719	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
39	rs554447874	chr7:26238720-26238721	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	9 gene(s)	Overlapped CNVs	n/a
40	rs574352184	chr7:26238731-26238732	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
41	rs543052533	chr7:26238744-26238745	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
42	rs147568244	chr7:26238752-26238753	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
43	rs373078849	chr7:26238758-26238759	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
44	rs532260002	chr7:26238763-26238764	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
45	rs545561581	chr7:26238775-26238776	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	11 gene(s)	Overlapped CNVs	n/a
46	rs559365534	chr7:26238832-26238833	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
47	rs527908616	chr7:26238838-26238839	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	12 gene(s)	Overlapped CNVs	n/a
48	rs141925857	chr7:26238881-26238882	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
49	rs567967488	chr7:26238912-26238913	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a
50	rs530415141	chr7:26238913-26238914	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region Chromatin interactive region	14 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Cancer	21183584	CNVD
abnormal development	18461090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Lung adenocarcinoma	17086460	CNVD
Colorectal cancer	19455253	CNVD
Lung cancer	17086460	CNVD
Breast cancer	18852474	CNVD

Chromatin state (count:807 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26231600-26239600	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
2	chr7:26231800-26239600	Transcr. at gene 5' and 3'	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:26233200-26239600	Transcr. at gene 5' and 3'	Dnd41	blood
4	chr7:26233400-26242800	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
5	chr7:26234200-26240400	Transcr. at gene 5' and 3'	Primary T regulatory cells fromperipheralblood	blood
6	chr7:26234600-26238200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:26234600-26238200	Weak transcription	Gastric	stomach
8	chr7:26234800-26239200	Transcr. at gene 5' and 3'	HUVEC	blood vessel
9	chr7:26234800-26239400	Transcr. at gene 5' and 3'	HUES64 Cell Line	embryonic stem cell
10	chr7:26234800-26239400	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr7:26234800-26240000	Active TSS	Right Atrium	heart
12	chr7:26234800-26240200	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
13	chr7:26235000-26238200	Weak transcription	Small Intestine	intestine
14	chr7:26235000-26239400	Transcr. at gene 5' and 3'	K562	blood
15	chr7:26235000-26239600	Transcr. at gene 5' and 3'	HUES48 Cell Line	embryonic stem cell
16	chr7:26235000-26239600	Transcr. at gene 5' and 3'	HUES6 Cell Line	embryonic stem cell
17	chr7:26235600-26238400	Weak transcription	Spleen	Spleen
18	chr7:26235600-26239400	Transcr. at gene 5' and 3'	iPS-18 Cell Line	embryonic stem cell
19	chr7:26236000-26238200	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr7:26236000-26239200	Transcr. at gene 5' and 3'	NHDF-Ad	bronchial
21	chr7:26236000-26239400	Transcr. at gene 5' and 3'	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr7:26236000-26239400	Transcr. at gene 5' and 3'	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr7:26236000-26239400	Transcr. at gene 5' and 3'	Primary T helper memory cells from peripheral blood 1	blood
24	chr7:26236200-26238200	Weak transcription	Esophagus	oesophagus
25	chr7:26236200-26245200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr7:26236400-26239200	Transcr. at gene 5' and 3'	Fetal Thymus	thymus
27	chr7:26236600-26239000	Transcr. at gene 5' and 3'	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr7:26236600-26239000	Transcr. at gene 5' and 3'	Primary T helper cells fromperipheralblood	blood
29	chr7:26236600-26239400	Transcr. at gene 5' and 3'	Primary T killer memory cells from peripheral blood	blood
30	chr7:26236600-26243600	Active TSS	Right Ventricle	heart
31	chr7:26236800-26239400	Transcr. at gene 5' and 3'	Primary B cells from peripheral blood	blood
32	chr7:26236800-26239400	Transcr. at gene 5' and 3'	Fetal Lung	lung
33	chr7:26236800-26242600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr7:26237000-26238200	Weak transcription	Pancreas	Pancrea
35	chr7:26237000-26243000	Active TSS	Ovary	ovary
36	chr7:26237000-26243600	Active TSS	Aorta	Aorta
37	chr7:26237000-26244400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr7:26237000-26245400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr7:26237200-26238200	Active TSS	GM12878-XiMat	blood
40	chr7:26237200-26238400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr7:26237200-26239200	Flanking Active TSS	Primary B cells from cord blood	blood
42	chr7:26237200-26242200	Active TSS	Monocytes-CD14+_RO01746	blood
43	chr7:26237200-26242400	Active TSS	Colonic Mucosa	Colon
44	chr7:26237200-26242800	Active TSS	Breast Myoepithelial Primary Cells	Breast
45	chr7:26237200-26243400	Active TSS	Fetal Muscle Leg	muscle
46	chr7:26237200-26244000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr7:26237200-26244400	Active TSS	Fetal Intestine Small	intestine
48	chr7:26237200-26244800	Active TSS	iPS-15b Cell Line	embryonic stem cell
49	chr7:26237200-26245000	Active TSS	Thymus	Thymus
50	chr7:26237400-26238200	Active TSS	Primary T cells fromperipheralblood	blood

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