Variant report
Variant | nsv888006 |
---|---|
Chromosome Location | chr7:48467581-48491825 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:47)
- CpG islands (count:61)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:47 , 50 per page) page:
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No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | BATF | chr7:48483391-48483642 | GM12878 | blood: | n/a | n/a |
2 | CCNT2 | chr7:48470894-48471088 | K562 | blood: | n/a | n/a |
3 | CEBPB | chr7:48473077-48473360 | A549 | lung: | n/a | chr7:48473193-48473204 |
4 | CEBPB | chr7:48473078-48473360 | HepG2 | liver: | n/a | chr7:48473193-48473204 |
5 | CEBPB | chr7:48473100-48473293 | K562 | blood: | n/a | chr7:48473193-48473204 |
6 | CEBPB | chr7:48473131-48473331 | Hela-S3 | cervix: | n/a | chr7:48473193-48473204 |
7 | CEBPB | chr7:48473031-48473381 | IMR90 | lung: | n/a | chr7:48473193-48473204 |
8 | CTCF | chr7:48483502-48483573 | LNCaP | prostate: | n/a | n/a |
9 | CTCF | chr7:48483464-48483541 | GM10266 | blood: | n/a | n/a |
10 | CTCF | chr7:48483556-48483597 | GM13977 | blood: | n/a | n/a |
11 | CTCF | chr7:48483576-48483600 | Medullo | brain: | n/a | n/a |
12 | CTCF | chr7:48483559-48483569 | GM10266 | blood: | n/a | n/a |
13 | CTCF | chr7:48483542-48483569 | Medullo | brain: | n/a | n/a |
14 | CUX1 | chr7:48480448-48480491 | GM12878 | blood: | n/a | n/a |
15 | E2F4 | chr7:48491705-48491712 | MCF10A-Er-Src | breast: | n/a | n/a |
16 | EBF1 | chr7:48467784-48467984 | GM12878 | blood: | n/a | n/a |
17 | FOS | chr7:48475342-48475492 | MCF10A-Er-Src | breast: | n/a | n/a |
18 | FOS | chr7:48475300-48475525 | MCF10A-Er-Src | breast: | n/a | n/a |
19 | FOXA1 | chr7:48481482-48481787 | HepG2 | liver: | n/a | chr7:48481624-48481639 |
20 | FOXA1 | chr7:48481492-48481737 | T-47D | breast: | n/a | chr7:48481624-48481639 |
21 | FOXA1 | chr7:48481414-48481756 | HepG2 | liver: | n/a | chr7:48481624-48481639 |
22 | FOXA1 | chr7:48481383-48481752 | HepG2 | liver: | n/a | chr7:48481624-48481639 |
23 | FOXA1 | chr7:48481449-48481742 | HepG2 | liver: | n/a | chr7:48481624-48481639 |
24 | FOXA1 | chr7:48481445-48481761 | T-47D | breast: | n/a | chr7:48481624-48481639 |
25 | FOXA2 | chr7:48481472-48481895 | A549 | lung: | n/a | n/a |
26 | FOXA2 | chr7:48481421-48481796 | A549 | lung: | n/a | n/a |
27 | JUN | chr7:48489960-48490014 | H1-hESC | embryonic stem cell: | n/a | n/a |
28 | MAFF | chr7:48468837-48468995 | K562 | blood: | n/a | chr7:48468899-48468917 |
29 | MAFF | chr7:48489253-48489510 | HepG2 | liver: | n/a | chr7:48489373-48489391 |
30 | MAFF | chr7:48468795-48469077 | HepG2 | liver: | n/a | chr7:48468899-48468917 |
31 | MAFK | chr7:48468804-48469079 | IMR90 | lung: | n/a | chr7:48468901-48468916 |
32 | MAFK | chr7:48489281-48489463 | HepG2 | liver: | n/a | chr7:48489374-48489389 |
33 | MAFK | chr7:48468779-48469048 | HepG2 | liver: | n/a | chr7:48468901-48468916 |
34 | MAFK | chr7:48468754-48469082 | HepG2 | liver: | n/a | chr7:48468901-48468916 |
35 | MAFK | chr7:48478073-48478230 | HepG2 | liver: | n/a | n/a |
36 | MAFK | chr7:48489229-48489482 | HepG2 | liver: | n/a | chr7:48489374-48489389 |
37 | MAX | chr7:48486756-48486905 | HepG2 | liver: | n/a | n/a |
38 | PAX5 | chr7:48483400-48483658 | GM12878 | blood: | n/a | n/a |
39 | POLR2A | chr7:48484992-48485075 | GM12878 | blood: | n/a | n/a |
40 | POLR2A | chr7:48491736-48491771 | MCF10A-Er-Src | breast: | n/a | n/a |
41 | POLR2A | chr7:48477424-48477561 | MCF10A-Er-Src | breast: | n/a | n/a |
42 | POLR2A | chr7:48473411-48473441 | GM12878 | blood: | n/a | n/a |
43 | SPI1 | chr7:48483433-48483554 | GM12878 | blood: | n/a | n/a |
44 | STAT3 | chr7:48477959-48478043 | MCF10A-Er-Src | breast: | n/a | n/a |
45 | STAT3 | chr7:48479379-48479835 | MCF10A-Er-Src | breast: | n/a | n/a |
46 | TCF7L2 | chr7:48467736-48468161 | PANC-1 | pancreas: | n/a | n/a |
47 | ZNF143 | chr7:48473683-48473921 | H1-hESC | embryonic stem cell: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:48491590-48491640 | PrEC | prostate: | n/a |
2 | chr7:48491590-48491640 | HCT-116 | colon: | n/a |
3 | chr7:48491590-48491640 | MCF-7 | breast: | n/a |
4 | chr7:48491590-48491640 | PFSK-1 | brain: | n/a |
5 | chr7:48491590-48491640 | U87 | brain: | n/a |
6 | chr7:48491590-48491640 | Hela-S3 | cervix: | n/a |
7 | chr7:48491590-48491640 | HPAEpiC | pulmonary alveolar: | n/a |
8 | chr7:48491590-48491640 | HepG2 | liver: | n/a |
9 | chr7:48491590-48491640 | ProgFib | skin: | n/a |
10 | chr7:48491590-48491640 | GM19239 | blood: | n/a |
11 | chr7:48491590-48491640 | AG04449 | skin: | fetal |
12 | chr7:48491590-48491640 | IMR90 | lung: | fetal |
13 | chr7:48491590-48491640 | HCPEpiC | choroid plexus: | n/a |
14 | chr7:48491590-48491640 | AG09309 | skin: | n/a |
15 | chr7:48491590-48491640 | HRCEpiC | kidney: | n/a |
16 | chr7:48491590-48491640 | GM12892 | blood: | n/a |
17 | chr7:48491590-48491640 | ECC-1 | luminal epithelium: | n/a |
18 | chr7:48491590-48491640 | RPTEC | kidney: | n/a |
19 | chr7:48491590-48491640 | AoSMC | blood vessel: | n/a |
20 | chr7:48491590-48491640 | SKMC | muscle: | n/a |
21 | chr7:48491590-48491640 | LNCaP | prostate: | n/a |
22 | chr7:48491590-48491640 | GM06990 | blood: | n/a |
23 | chr7:48491590-48491640 | GM12891 | blood: | n/a |
24 | chr7:48491590-48491640 | SAEC | small airway: | n/a |
25 | chr7:48491590-48491640 | BE2_C | brain: | n/a |
26 | chr7:48491590-48491640 | HUVEC | blood vessel: | n/a |
27 | chr7:48491590-48491640 | GM12878 | blood: | n/a |
28 | chr7:48491590-48491640 | SK-N-SH | brain: | n/a |
29 | chr7:48491590-48491640 | HL-60 | blood: | n/a |
30 | chr7:48491590-48491640 | ovcar-3 | ovarian: | n/a |
31 | chr7:48491590-48491640 | AG09319 | gingival: | n/a |
32 | chr7:48491590-48491640 | HAEpiC | amniotic membrane: | n/a |
33 | chr7:48491590-48491640 | NHDF-neo | bronchial: | n/a |
34 | chr7:48491590-48491640 | NH-A | brain: | n/a |
35 | chr7:48491590-48491640 | T-47D | breast: | n/a |
36 | chr7:48491590-48491640 | Caco-2 | colon: | n/a |
37 | chr7:48491590-48491640 | AG04450 | lung: | fetal |
38 | chr7:48491590-48491640 | SK-N-SH_RA | brain: | n/a |
39 | chr7:48491590-48491640 | CMK | blood: | n/a |
40 | chr7:48491590-48491640 | HNPCEpiC | eye: | n/a |
41 | chr7:48491590-48491640 | H1-hESC | embryonic stem cell: | embryo |
42 | chr7:48491590-48491640 | MCF10A-Er-Src | breast: | n/a |
43 | chr7:48491590-48491640 | K562 | blood: | n/a |
44 | chr7:48491590-48491640 | Hepatocyte | liver: | n/a |
45 | chr7:48491590-48491640 | A549 | lung: | n/a |
46 | chr7:48491590-48491640 | HEK293 | kidney: | embryo |
47 | chr7:48491590-48491640 | SK-N-MC | brain: | n/a |
48 | chr7:48491590-48491640 | HEEpiC | esophagus: | n/a |
49 | chr7:48491590-48491640 | NHBE | bronchial: | n/a |
50 | chr7:48491590-48491640 | HCF | heart: | n/a |
No data |
(count:1 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-SUN3-5 | chr7:48491789-48495224 | NONHSAT120528 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ABCA13 | TF binding region |
ABCA13 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs13243091 | chr7:48467581-48467582 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
2 | rs535505840 | chr7:48467590-48467591 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
3 | rs551237401 | chr7:48467599-48467600 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
4 | rs34541457 | chr7:48467634-48467635 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
5 | rs192767578 | chr7:48467639-48467640 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
6 | rs34529024 | chr7:48467654-48467655 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
7 | rs397810019 | chr7:48467663-48467664 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
8 | rs545730579 | chr7:48467664-48467665 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
9 | rs558975791 | chr7:48467678-48467679 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
10 | rs34563223 | chr7:48467684-48467685 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
11 | rs541242402 | chr7:48467702-48467703 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
12 | rs559835335 | chr7:48467740-48467741 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
13 | rs371050717 | chr7:48467771-48467772 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
14 | rs557976777 | chr7:48467799-48467800 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
15 | rs542222130 | chr7:48467807-48467808 | Enhancers Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
16 | rs562100355 | chr7:48467816-48467817 | Enhancers Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
17 | rs531208371 | chr7:48467895-48467896 | Enhancers Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
18 | rs551696497 | chr7:48467915-48467916 | Enhancers Strong transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
19 | rs28369084 | chr7:48468038-48468039 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
20 | rs527509569 | chr7:48468046-48468047 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
21 | rs533604421 | chr7:48468058-48468059 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
22 | rs555057317 | chr7:48468126-48468127 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
23 | rs567776369 | chr7:48468146-48468147 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
24 | rs536704811 | chr7:48468154-48468155 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
25 | rs141535791 | chr7:48468158-48468159 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
26 | rs147039030 | chr7:48468185-48468186 | Enhancers Strong transcription Weak transcription Flanking Active TSS | n/a | n/a | Overlapped CNVs | n/a |
27 | rs184638579 | chr7:48468206-48468207 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs559229807 | chr7:48468227-48468228 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs138162530 | chr7:48468247-48468248 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs541625761 | chr7:48468341-48468342 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs554701059 | chr7:48468354-48468355 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs13244050 | chr7:48468357-48468358 | Enhancers Strong transcription Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
33 | rs187850660 | chr7:48468360-48468361 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs562237505 | chr7:48468374-48468375 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs543890788 | chr7:48468386-48468387 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs79241711 | chr7:48468430-48468431 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs544657885 | chr7:48468467-48468468 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs202043841 | chr7:48468470-48468471 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs565206548 | chr7:48468578-48468579 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs371359512 | chr7:48468584-48468585 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs76993235 | chr7:48468695-48468696 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs547623054 | chr7:48468708-48468709 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs567513017 | chr7:48468824-48468825 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs191899630 | chr7:48468837-48468838 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs550332207 | chr7:48468844-48468845 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs562783135 | chr7:48468858-48468859 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs78050577 | chr7:48468886-48468887 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs80110456 | chr7:48468887-48468888 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs143114868 | chr7:48468913-48468914 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs539042690 | chr7:48468998-48468999 | Enhancers Strong transcription Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Glioblastoma multiforme | 17387387 | CNVD |
Astrocytoma | 17387387 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Biliary cancer | 19435499 | CNVD |
Wilms tumour | 21544195 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Glioma | 21971842 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Liposarcoma | 21253554 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
Oral cancer | 21386901 | CNVD |
colon cancer | 17210682 | CNVD |
Lung adenocarcinoma | 21810691 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Hypothalamic hamartomas | 18252217 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Peripheral t-cell lymphoma | 19118030 | CNVD |
Medulloblastoma | 18056178 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Seminomas | 18059402 | CNVD |
Testicular cancer | 18059402 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Autism | 19415332 | CNVD |
Pleomorphic xanthoastrocytoma | 20730472 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Malaria | 21533027 | CNVD |
Melanoma | 18172304 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
head and neck squamous cell carcinoma | 19289630 | CNVD |
Stenocardia | 21860640 | CNVD |
Vasospasm | 21860640 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Lung cancer | 18438408 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Cancer | 21637783 | CNVD |
Squamous cell cancer | 20885788 | CNVD |
Breast cancer | 16397240 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Autism | 22495311 | CNVD |
Glioblastoma multiforme | 18628472 | CNVD |
Cancer | 21183584 | CNVD |
Breast cancer | 21785460 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Williams-beuren syndrome | 22470819 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Breast cancer | 21364760 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Glioblastoma multiforme | 21750150 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Acute myeloid leukemia | 17237825 | CNVD |
Gastric cancer | 24379144 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Abnormal phenotypes | 18644119 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Pancreatic endocrine tumor | 17639061 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Lung cancer | 17086460 | CNVD |
Non-small cell lung cancer | 17643093 | CNVD |
Ovarian cancer | 18182111 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Glioblastoma multiforme | 17369134 | CNVD |
Barrett''s esophagus | 18559552 | CNVD |
head and neck squamous cell carcinoma | 16943533 | CNVD |
Anaplastic thyroid cancer | 17079354 | CNVD |
Basal-like breast cancer | 17875215 | CNVD |
Colorectal cancer | 16882699 | CNVD |
Colorectal cancer | 18794099 | CNVD |
Gastrointestinal stromal cancer | 17643098 | CNVD |
Lung cancer | 18381415 | CNVD |
Metastatic colorectal cancer | 17664472 | CNVD |
Non-small cell lung cancer | 19255323 | CNVD |
Non-small cell lung cancer | 17673923 | CNVD |
Non-small cell lung cancer | 17975165 | CNVD |
Non-small cell lung cancer | 19622585 | CNVD |
Ovarian cancer | 16607561 | CNVD |
Squamous cell cancer | 19670535 | CNVD |
head and neck squamous cell carcinoma | 16818711 | CNVD |
small cell lung cancer | 18829487 | CNVD |
Breast cancer | 17661082 | CNVD |
Adenocarcinoma | 19260752 | CNVD |
Esophageal cancer | 16575012 | CNVD |
Lung adenocarcinoma | 19138956 | CNVD |
Lung adenocarcinoma | 18379350 | CNVD |
Lung adenocarcinoma | 18258923 | CNVD |
Lung cancer | 19138956 | CNVD |
Lung cancer | 18379350 | CNVD |
Lung cancer | 18258923 | CNVD |
Non-small cell lung cancer | 18304967 | CNVD |
Non-small cell lung cancer | 19451690 | CNVD |
Non-small cell lung cancer | 19260752 | CNVD |
Non-small cell lung cancer | 17079354 | CNVD |
Non-small cell lung cancer | 18559607 | CNVD |
Rectal cancer | 19506820 | CNVD |
Triple-negative breast cancer | 18950515 | CNVD |
head and neck squamous cell carcinoma | 18813952 | CNVD |
Non-small cell lung cancer | 17504988 | CNVD |
Non-small cell lung cancer | 16943533 | CNVD |
Non-small cell lung cancer | 18509184 | CNVD |
head and neck squamous cell carcinoma | 17538160 | CNVD |
Colorectal cancer | 19712476 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Lung cancer | 19671679 | CNVD |
head and neck squamous cell carcinoma | 17671120 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Lissencephaly | 21572526 | CNVD |
Breast cancer | 17603634 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Breast cancer | 22522925 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:48449400-48467800 | Weak transcription | Primary hematopoietic stem cells | blood |
2 | chr7:48464600-48469200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
3 | chr7:48464600-48470000 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
4 | chr7:48466000-48468000 | Enhancers | NH-A | brain |
5 | chr7:48466200-48468000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
6 | chr7:48466600-48468000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
7 | chr7:48466600-48469000 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
8 | chr7:48467000-48467600 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
9 | chr7:48467000-48468600 | Enhancers | NHEK | skin |
10 | chr7:48467200-48467600 | Flanking Active TSS | Foreskin Keratinocyte Primary Cells skin03 | Skin |
11 | chr7:48467400-48468200 | Flanking Active TSS | HMEC | breast |
12 | chr7:48467600-48468600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
13 | chr7:48467800-48468000 | Strong transcription | Primary hematopoietic stem cells | blood |
14 | chr7:48468000-48500000 | Weak transcription | Primary hematopoietic stem cells | blood |
15 | chr7:48468200-48469200 | Enhancers | HMEC | breast |
16 | chr7:48469200-48480200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
17 | chr7:48470000-48470800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
18 | chr7:48470800-48471600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
19 | chr7:48471600-48479400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
20 | chr7:48473200-48473800 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
21 | chr7:48479400-48483400 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
22 | chr7:48481400-48482600 | Enhancers | Dnd41 | blood |
23 | chr7:48482800-48483200 | Enhancers | Fetal Muscle Trunk | muscle |
24 | chr7:48482800-48486400 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
25 | chr7:48483400-48484200 | ZNF genes & repeats | Primary neutrophils fromperipheralblood | blood |
26 | chr7:48484000-48484200 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
27 | chr7:48484200-48488200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
28 | chr7:48487000-48494200 | Weak transcription | Spleen | Spleen |
29 | chr7:48488200-48491000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
30 | chr7:48491000-48496400 | Strong transcription | Primary neutrophils fromperipheralblood | blood |