Variant report

Variant nsv888047
Chromosome Location chr7:53813283-54031396
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:53827800-53828200 Enhancers Brain Hippocampus Middle brain
2 chr7:53832000-53837800 Weak transcription K562 blood
3 chr7:53836200-53836600 Enhancers Fetal Stomach stomach
4 chr7:53837800-53839200 Strong transcription K562 blood
5 chr7:53838200-53838800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr7:53839000-53839400 Active TSS Pancreatic Islets Pancreatic Islet
7 chr7:53839200-53847000 Weak transcription K562 blood
8 chr7:53839400-53844200 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr7:53840400-53840800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr7:53840800-53843200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr7:53841200-53842000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr7:53843200-53843400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr7:53843400-53843600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr7:53844000-53844200 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr7:53844200-53844600 Active TSS Pancreatic Islets Pancreatic Islet
16 chr7:53844600-53844800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr7:53844800-53845200 Enhancers Pancreatic Islets Pancreatic Islet
18 chr7:53847000-53847200 Strong transcription K562 blood
19 chr7:53847200-53848400 Weak transcription K562 blood
20 chr7:53861800-53862000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
21 chr7:53864000-53864400 Enhancers K562 blood
22 chr7:53868200-53868800 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr7:53877200-53880200 Active TSS K562 blood
24 chr7:53879000-53879400 Active TSS NHEK skin
25 chr7:53879000-53879600 ZNF genes & repeats Fetal Intestine Large intestine
26 chr7:53879000-53879600 Active TSS Fetal Intestine Small intestine
27 chr7:53879000-53879600 Active TSS Right Ventricle heart
28 chr7:53879000-53880000 Active TSS Placenta Placenta
29 chr7:53879200-53879600 Active TSS HUVEC blood vessel
30 chr7:53893800-53894200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
31 chr7:53899000-53899400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr7:53903000-53903200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr7:53916800-53917200 Enhancers Pancreatic Islets Pancreatic Islet
34 chr7:53936000-53936200 Enhancers Duodenum Smooth Muscle Duodenum
35 chr7:53959400-53959600 Active TSS HSMM muscle
36 chr7:53959600-53959800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
37 chr7:53959600-53959800 Flanking Active TSS HSMM muscle
38 chr7:53971800-53972200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr7:53971800-53972600 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr7:53972000-53972200 Enhancers HUES48 Cell Line embryonic stem cell
41 chr7:53972000-53972400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr7:53972000-53972600 Enhancers H1 Cell Line embryonic stem cell
43 chr7:53972000-53972600 Enhancers HUES6 Cell Line embryonic stem cell
44 chr7:53972200-53973000 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr7:53972600-53975200 Weak transcription H1 Cell Line embryonic stem cell
46 chr7:53973000-53973400 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
47 chr7:54014000-54016200 Enhancers Fetal Lung lung
48 chr7:54014400-54015000 Enhancers Fetal Stomach stomach
49 chr7:54014800-54016000 Enhancers Fetal Brain Male brain
50 chr7:54015400-54015600 Enhancers Fetal Brain Female brain

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