Variant report

Variant	nsv888678
Chromosome Location	chr7:86932085-87101407
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2415)
CpG islands
(count:1528)
Chromatin interactive
region (count:197)
LncRNA
region (count:47)
Mature miRNA
region (count: 0)
miRNA target
sites (count:8)

(count:2415 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:87020272-87021173	K562	blood:	n/a	n/a
2	ARID3A	chr7:86993675-86993915	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:86968613-86969018	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:86941555-86941893	HepG2	liver:	n/a	n/a
5	ARID3A	chr7:86961364-86962047	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:86955413-86955488	HepG2	liver:	n/a	n/a
7	ARID3A	chr7:87044141-87044339	HepG2	liver:	n/a	n/a
8	ARID3A	chr7:87093353-87093783	HepG2	liver:	n/a	n/a
9	ARID3A	chr7:87046029-87046336	K562	blood:	n/a	n/a
10	ARID3A	chr7:86974371-86975105	HepG2	liver:	n/a	n/a
11	ARID3A	chr7:86973922-86974033	HepG2	liver:	n/a	n/a
12	ARID3A	chr7:87004805-87005060	K562	blood:	n/a	n/a
13	ARID3A	chr7:87046062-87046357	HepG2	liver:	n/a	n/a
14	ARID3A	chr7:86960510-86960590	K562	blood:	n/a	n/a
15	ARID3A	chr7:86941639-86941925	K562	blood:	n/a	n/a
16	ARID3A	chr7:86974851-86974983	K562	blood:	n/a	n/a
17	ATF1	chr7:87080871-87080985	K562	blood:	n/a	n/a
18	ATF1	chr7:87010194-87010669	K562	blood:	n/a	n/a
19	ATF1	chr7:86960331-86960607	K562	blood:	n/a	n/a
20	ATF1	chr7:87068362-87068484	K562	blood:	n/a	n/a
21	ATF2	chr7:86945334-86946080	GM12878	blood:	n/a	n/a
22	ATF2	chr7:87075213-87075701	GM12878	blood:	n/a	n/a
23	ATF2	chr7:87075193-87075772	GM12878	blood:	n/a	n/a
24	ATF2	chr7:86974265-86974965	GM12878	blood:	n/a	n/a
25	ATF2	chr7:86945614-86946089	GM12878	blood:	n/a	n/a
26	BACH1	chr7:86941609-86941797	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr7:86974410-86974978	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr7:87094518-87094660	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr7:86941701-86941931	K562	blood:	n/a	n/a
30	BACH1	chr7:86999982-87000415	K562	blood:	n/a	n/a
31	BACH1	chr7:86974637-86974778	K562	blood:	n/a	n/a
32	BACH1	chr7:87020494-87021053	K562	blood:	n/a	n/a
33	BACH1	chr7:87000014-87000336	H1-hESC	embryonic stem cell:	n/a	n/a
34	BATF	chr7:86945555-86946033	GM12878	blood:	n/a	n/a
35	BATF	chr7:87075232-87075613	GM12878	blood:	n/a	n/a
36	BATF	chr7:86945745-86945990	GM12878	blood:	n/a	n/a
37	BCL11A	chr7:86945573-86945981	GM12878	blood:	n/a	n/a
38	BCL11A	chr7:87075212-87075653	GM12878	blood:	n/a	chr7:87075396-87075405
39	BCL11A	chr7:86945581-86946003	GM12878	blood:	n/a	n/a
40	BCL11A	chr7:87075188-87075625	GM12878	blood:	n/a	chr7:87075396-87075405
41	BCL3	chr7:86945507-86946036	GM12878	blood:	n/a	n/a
42	BCLAF1	chr7:86974423-86975303	GM12878	blood:	n/a	chr7:86975129-86975138
43	BCLAF1	chr7:87045947-87046408	GM12878	blood:	n/a	n/a
44	BHLHE40	chr7:86941667-86941872	A549	lung:	n/a	n/a
45	BHLHE40	chr7:87075261-87075645	GM12878	blood:	n/a	n/a
46	BHLHE40	chr7:86974318-86975213	K562	blood:	n/a	chr7:86975026-86975042
47	BHLHE40	chr7:87093399-87093797	HepG2	liver:	n/a	n/a
48	BHLHE40	chr7:86970899-86970906	GM12878	blood:	n/a	n/a
49	BHLHE40	chr7:86974398-86975308	GM12878	blood:	n/a	chr7:86975026-86975042
50	BHLHE40	chr7:86957671-86957889	K562	blood:	n/a	n/a

(count:1528 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:86974833-86974883	HPAEpiC	pulmonary alveolar:	n/a
2	chr7:86974810-86974860	K562	blood:	n/a
3	chr7:86974991-86975041	SKMC	muscle:	n/a
4	chr7:86974833-86974883	HPAEpiC	pulmonary alveolar:	n/a
5	chr7:86974810-86974860	K562	blood:	n/a
6	chr7:86974991-86975041	SKMC	muscle:	n/a
7	chr7:86974950-86975000	HCF	heart:	n/a
8	chr7:86978757-86978807	MCF-7	breast:	n/a
9	chr7:86974991-86975041	MCF-7	breast:	n/a
10	chr7:86973677-86973727	HRCEpiC	kidney:	n/a
11	chr7:86975087-86975137	NH-A	brain:	n/a
12	chr7:87044236-87044286	AG09309	skin:	n/a
13	chr7:86978757-86978807	H1-hESC	embryonic stem cell:	embryo
14	chr7:86975534-86975584	LNCaP	prostate:	n/a
15	chr7:86974847-86974897	AG09309	skin:	n/a
16	chr7:86978757-86978807	HMEC	breast:	n/a
17	chr7:86974744-86974794	HIPEpiC	eye:	n/a
18	chr7:87042706-87042756	HCT-116	colon:	n/a
19	chr7:86975534-86975584	HMEC	breast:	n/a
20	chr7:86974956-86975006	IMR90	lung:	fetal
21	chr7:86974741-86974791	GM12878	blood:	n/a
22	chr7:86975534-86975584	CMK	blood:	n/a
23	chr7:86974991-86975041	NHBE	bronchial:	n/a
24	chr7:86946141-86946191	AG09319	gingival:	n/a
25	chr7:86974810-86974860	PFSK-1	brain:	n/a
26	chr7:86974741-86974791	AG04449	skin:	fetal
27	chr7:87042706-87042756	AoSMC	blood vessel:	n/a
28	chr7:87027887-87027937	A549	lung:	n/a
29	chr7:86975087-86975137	NHBE	bronchial:	n/a
30	chr7:86978757-86978807	NH-A	brain:	n/a
31	chr7:86974810-86974860	HCT-116	colon:	n/a
32	chr7:87093634-87093684	AG04450	lung:	fetal
33	chr7:86973677-86973727	HL-60	blood:	n/a
34	chr7:86974922-86974972	IMR90	lung:	fetal
35	chr7:87044236-87044286	HRPEpiC	eye:	n/a
36	chr7:86974838-86974888	AG09309	skin:	n/a
37	chr7:86970843-86970893	HRPEpiC	eye:	n/a
38	chr7:86974741-86974791	GM12891	blood:	n/a
39	chr7:86974897-86974947	SK-N-SH	brain:	n/a
40	chr7:87044236-87044286	BJ	skin:	n/a
41	chr7:86974961-86975011	PANC-1	pancreas:	n/a
42	chr7:86946141-86946191	NH-A	brain:	n/a
43	chr7:86974833-86974883	K562	blood:	n/a
44	chr7:86974956-86975006	PFSK-1	brain:	n/a
45	chr7:86946141-86946191	GM19239	blood:	n/a
46	chr7:86974810-86974860	RPTEC	kidney:	n/a
47	chr7:86974810-86974860	T-47D	breast:	n/a
48	chr7:86970843-86970893	HEEpiC	esophagus:	n/a
49	chr7:86974833-86974883	CMK	blood:	n/a
50	chr7:86974956-86975006	AG04450	lung:	fetal

(count:197 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr7:86781692..86783648-chr7:87052810..87055200,2	MCF-7	breast:
2	chr7:86973592..86975705-chr7:87021157..87023008,2	K562	blood:
3	chr7:87051942..87054838-chr7:87071863..87073802,2	K562	blood:
4	chr7:87073633..87076529-chr7:87078114..87081650,4	K562	blood:
5	chr7:86933016..86934847-chr7:86945997..86948049,2	MCF-7	breast:
6	chr7:87006049..87008428-chr7:87014986..87016616,2	MCF-7	breast:
7	chr7:86946860..86949109-chr7:87005374..87008046,2	MCF-7	breast:
8	chr7:86959696..86961373-chr7:86973324..86975320,2	K562	blood:
9	chr7:86965004..86967004-chr7:87042803..87044523,2	MCF-7	breast:
10	chr7:86973511..86975154-chr7:87000101..87001624,2	MCF-7	breast:
11	chr6:133135224..133137195-chr7:86974442..86977103,2	MCF-7	breast:
12	chr7:86978537..86980219-chr7:86982225..86984004,2	MCF-7	breast:
13	chr7:87022223..87024497-chr7:87027148..87029253,2	MCF-7	breast:
14	chr7:86965004..86967004-chr7:87042803..87044523,2	MCF-7	breast:
15	chr7:87027992..87031252-chr7:87041003..87044064,3	MCF-7	breast:
16	chr7:86991467..86994068-chr7:87051605..87053825,2	MCF-7	breast:
17	chr7:86999462..87001572-chr7:87008602..87011097,2	K562	blood:
18	chr7:86975683..86979133-chr7:86998310..87000845,3	MCF-7	breast:
19	chr7:87028657..87031111-chr7:87034515..87036844,2	K562	blood:
20	chr7:86940013..86941754-chr7:86943366..86945178,2	K562	blood:
21	chr7:87015263..87017915-chr7:87019434..87021863,2	K562	blood:
22	chr7:86971875..86975040-chr7:87004120..87006743,3	MCF-7	breast:
23	chr7:86984161..86987011-chr7:86997927..87000156,2	MCF-7	breast:
24	chr7:86940770..86949819-chr7:87040881..87047482,46	MCF-7	breast:
25	chr7:86941043..86949081-chr7:86971937..86980200,24	MCF-7	breast:
26	chr7:86941366..86942177-chr7:87136531..87137084,2	MCF-7	breast:
27	chr7:86952573..86954250-chr7:86973648..86976446,2	MCF-7	breast:
28	chr7:86941239..86942263-chr7:87043678..87045087,6	K562	blood:
29	chr7:87051942..87054838-chr7:87071863..87073802,2	K562	blood:
30	chr7:87020157..87022071-chr7:87039482..87041620,2	K562	blood:
31	chr7:86848705..86851193-chr7:87044626..87046849,2	MCF-7	breast:
32	chr7:87026550..87029419-chr7:87039451..87043788,3	MCF-7	breast:
33	chr7:86946093..86951031-chr7:87040729..87046764,10	MCF-7	breast:
34	chr7:87007822..87010173-chr7:87010521..87013369,2	K562	blood:
35	chr7:86980008..86983941-chr7:87041444..87044239,5	MCF-7	breast:
36	chr7:86980728..86982977-chr7:86985546..86988515,2	MCF-7	breast:
37	chr7:86984184..86986577-chr7:86994511..86997400,2	MCF-7	breast:
38	chr7:86941251..86942248-chr7:87045584..87047452,18	MCF-7	breast:
39	chr7:86960738..86962242-chr7:86964878..86967061,2	MCF-7	breast:
40	chr7:86945673..86950114-chr7:86965968..86970483,8	MCF-7	breast:
41	chr7:87040455..87042018-chr7:87042195..87043888,2	MCF-7	breast:
42	chr7:87035470..87037360-chr7:87041461..87043565,2	K562	blood:
43	chr7:87044946..87047551-chr7:87049073..87051453,2	MCF-7	breast:
44	chr7:86972445..86978400-chr7:87040084..87047120,21	MCF-7	breast:
45	chr7:86977478..86981307-chr7:86983629..86987308,5	K562	blood:
46	chr7:86945395..86947289-chr7:87038395..87040180,2	MCF-7	breast:
47	chr7:87052110..87054985-chr7:87059755..87061906,2	MCF-7	breast:
48	chr7:86972969..86975918-chr7:87004365..87006027,2	K562	blood:
49	chr7:87048856..87050665-chr7:87056840..87059034,2	MCF-7	breast:
50	chr7:86974685..86977736-chr7:87002429..87005336,3	MCF-7	breast:

(count:47 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ABCB4-1	chr7:86970839-86971000	ENSG00000182165
2	lnc-ABCB4-1	chr7:86970839-86971000	ENSG00000182165
3	lnc-ABCB4-1	chr7:86954632-86954760	NONHSAT121827
4	lnc-ABCB4-1	chr7:86954379-86954760	NONHSAT121825
5	lnc-ABCB4-1	chr7:86974621-86974802	ENSG00000182165
6	lnc-ABCB4-1	chr7:86970839-86971000	NONHSAT121830
7	lnc-ABCB4-1	chr7:86959386-86959410	NONHSAT121830
8	lnc-ABCB4-1	chr7:86974513-86974549	ENSG00000182165
9	lnc-DMTF1-4	chr7:87004551-87005041	NONHSAT121833
10	lnc-ABCB4-1	chr7:86970839-86971000	ENSG00000182165
11	lnc-ABCB4-1	chr7:86974359-86974779	ENSG00000182165.13
12	lnc-ABCB4-1	chr7:86974550-86974802	ENSG00000182165
13	lnc-ABCB4-1	chr7:86970839-86971000	XLOC_006516
14	lnc-ABCB4-1	chr7:86974359-86974831	ENSG00000182165
15	lnc-ABCB4-1	chr7:86954666-86954760	XLOC_006516
16	lnc-DMTF1-4	chr7:87005144-87005205	NONHSAT121833
17	lnc-ABCB4-1	chr7:86974359-86974515	XLOC_006516
18	lnc-ABCB4-1	chr7:86970839-86971000	NR_015381
19	lnc-ABCB4-1	chr7:86974621-86974831	ENSG00000182165
20	lnc-ABCB4-1	chr7:86974359-86974808	NR_015381
21	lnc-ABCB4-1	chr7:86974621-86974845	NONHSAT121831
22	lnc-ABCB4-1	chr7:86970839-86971000	XLOC_006516
23	lnc-ABCB4-1	chr7:86953598-86954760	XLOC_006516
24	lnc-ABCB4-1	chr7:86974336-86974549	NONHSAT121831
25	lnc-ABCB4-1	chr7:86954666-86954760	ENSG00000182165
26	lnc-ABCB4-1	chr7:86954638-86954760	NONHSAT121828
27	lnc-ABCB4-1	chr7:86954615-86954760	ENSG00000182165
28	lnc-ABCB4-1	chr7:86974621-86974883	NONHSAT121828
29	lnc-ABCB4-1	chr7:86970839-86971000	NONHSAT121825
30	lnc-ABCB4-1	chr7:86970839-86971000	NONHSAT121828
31	lnc-ABCB4-1	chr7:86954664-86954760	NR_015381
32	lnc-ABCB4-1	chr7:86974359-86974755	NONHSAT121825
33	lnc-ABCB4-1	chr7:86954663-86954760	ENSG00000182165.13
34	lnc-ABCB4-1	chr7:86974359-86974549	ENSG00000182165
35	lnc-ABCB4-1	chr7:86970954-86971000	NONHSAT121827
36	lnc-ABCB4-1	chr7:86954666-86954760	XLOC_006516
37	lnc-ABCB4-1	chr7:86974621-86974837	XLOC_006516
38	lnc-ABCB4-1	chr7:86974621-86974802	ENSG00000182165
39	lnc-ABCB4-1	chr7:86974621-86974831	XLOC_006516
40	lnc-ABCB4-1	chr7:86970839-86971000	XLOC_006516
41	lnc-ABCB4-1	chr7:86974621-86974819	NONHSAT121830
42	lnc-ABCB4-1	chr7:86954666-86954760	ENSG00000182165
43	lnc-ABCB4-1	chr7:86974359-86974808	XLOC_006516
44	lnc-ABCB4-1	chr7:86970671-86971000	ENSG00000182165.13
45	lnc-ABCB4-1	chr7:86970839-86971000	ENSG00000182165
46	lnc-ABCB4-1	chr7:86954541-86954760	ENSG00000182165
47	lnc-ABCB4-1	chr7:86974621-86974852	NONHSAT121827

No data

(count:8 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CROT	hsa-miR-33a-5p	chr7:87028176-87028183
2	CROT	hsa-miR-106b-5p	chr7:87028927-87028947
3	CROT	hsa-miR-33a-5p	chr7:87028236-87028259
4	CROT	hsa-miR-106b-5p	chr7:87028334-87028356
5	CROT	hsa-miR-33a-5p	chr7:87028163-87028183
6	CROT	hsa-miR-106b-5p	chr7:87028349-87028356
7	CROT	hsa-miR-221-3p	chr7:87028080-87028099
8	CROT	hsa-miR-106b-5p	chr7:87028529-87028549

Variant related genes	Relation type
TP53TG1	TF binding region
ABCB4	TF binding region
CROT	TF binding region
TP53TG1	CpG island
ABCB4	CpG island
CROT	CpG island
ENSG00000224046	chromatin interactions
ENSG00000135185	chromatin interactions
ENSG00000005471	chromatin interactions
ENSG00000005469	chromatin interactions
ENSG00000206754	chromatin interactions
ENSG00000006634	chromatin interactions
ENSG00000112306	chromatin interactions
ENSG00000101040	chromatin interactions
ENSG00000075303	chromatin interactions
ENSG00000200397	chromatin interactions
ENSG00000135164	chromatin interactions
ENSG00000182165	chromatin interactions
SNCA	miRNA target sites
FRS2	miRNA target sites
RNF114	miRNA target sites
DDX47	miRNA target sites
KLB	miRNA target sites
UBE3B	miRNA target sites
FAM129A	miRNA target sites
NIN	miRNA target sites
RAB30	miRNA target sites
C1orf63	miRNA target sites
MAPRE2	miRNA target sites
NHP2L1	miRNA target sites
TUSC2	miRNA target sites
GLRX	miRNA target sites
CAPRIN2	miRNA target sites
NAALAD2	miRNA target sites
OTUD4	miRNA target sites

Extended variants
information (count: 5971 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:5971 , 50 per page) page: 1 2 3 4 5 6 7 ... 120

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs802098	chr7:86932085-86932086	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs552199307	chr7:86932110-86932111	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564100810	chr7:86932133-86932134	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs140656457	chr7:86932147-86932148	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs113304774	chr7:86932255-86932256	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs149742687	chr7:86932310-86932311	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs568135824	chr7:86932349-86932350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs370503602	chr7:86932404-86932405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34136003	chr7:86932429-86932430	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs71524687	chr7:86932432-86932433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs535645317	chr7:86932536-86932537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs547251262	chr7:86932574-86932575	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs112566193	chr7:86932598-86932599	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs145465403	chr7:86932621-86932622	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs539372959	chr7:86932638-86932639	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs559418596	chr7:86932640-86932641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs558511209	chr7:86932641-86932642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs148390488	chr7:86932662-86932663	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs537924388	chr7:86932716-86932717	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs556619721	chr7:86932722-86932723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs78677810	chr7:86932733-86932734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs542432165	chr7:86932734-86932735	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs560715165	chr7:86932767-86932768	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs572756125	chr7:86932892-86932893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs546556162	chr7:86932899-86932900	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs192088090	chr7:86932903-86932904	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs114353690	chr7:86932908-86932909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs116466482	chr7:86932930-86932931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs561832821	chr7:86932958-86932959	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs529023482	chr7:86932979-86932980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs547165281	chr7:86932994-86932995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs565571961	chr7:86933001-86933002	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs528777916	chr7:86933010-86933011	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs111343348	chr7:86933100-86933101	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs150948661	chr7:86933122-86933123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs570708681	chr7:86933128-86933129	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs552075145	chr7:86933130-86933131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs538247850	chr7:86933160-86933161	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs531801108	chr7:86933220-86933221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs117366205	chr7:86933276-86933277	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs140889146	chr7:86933287-86933288	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs535982719	chr7:86933303-86933304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs554391762	chr7:86933345-86933346	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs184995514	chr7:86933393-86933394	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs546493136	chr7:86933403-86933404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs564806373	chr7:86933414-86933415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs4305815	chr7:86933444-86933445	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs543400209	chr7:86933452-86933453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs146606953	chr7:86933523-86933524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs141471401	chr7:86933578-86933579	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Basal cell lymphoma	17170743	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Biliary cancer	19435499	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Cancer	21183584	CNVD
Hepatocellular carcinoma	16750200	CNVD
Non-small cell lung cancer	21829676	CNVD
Gastric cancer	24379144	CNVD
Glioblastoma multiforme	17002787	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	16397240	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Neurodevelopmental disorder	22521361	CNVD
Metanephric adenoma	20802469	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Schizophrenia	17879154	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	16461572	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	20858243	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	16616336	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Prostate cancer	22341455	CNVD

Chromatin state (count:2876 , 50 per page) page: 1 2 3 4 5 6 7 ... 58

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:86931600-86932200	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr7:86931600-86936800	Weak transcription	Right Atrium	heart
3	chr7:86939200-86940000	Enhancers	HepG2	liver
4	chr7:86940000-86940200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr7:86940000-86940400	Enhancers	Liver	Liver
6	chr7:86940000-86940400	Enhancers	Duodenum Mucosa	Duodenum
7	chr7:86940000-86940400	Enhancers	Small Intestine	intestine
8	chr7:86940000-86940600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr7:86940000-86940600	Enhancers	Fetal Intestine Large	intestine
10	chr7:86940000-86940600	Flanking Active TSS	HepG2	liver
11	chr7:86940000-86940800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr7:86940000-86941600	Enhancers	Fetal Intestine Small	intestine
13	chr7:86940200-86940600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr7:86940400-86946000	Weak transcription	Duodenum Mucosa	Duodenum
15	chr7:86940600-86941200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr7:86940600-86941800	Enhancers	HepG2	liver
17	chr7:86940600-86956400	Weak transcription	Fetal Intestine Large	intestine
18	chr7:86940800-86945600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr7:86941200-86942000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr7:86941800-86942000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr7:86941800-86945800	Weak transcription	HepG2	liver
22	chr7:86942000-86942200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr7:86944800-86952400	Weak transcription	Pancreas	Pancrea
24	chr7:86945400-86945600	Enhancers	GM12878-XiMat	blood
25	chr7:86945400-86945800	Enhancers	NHEK	skin
26	chr7:86945400-86946400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr7:86945400-86946600	Enhancers	HMEC	breast
28	chr7:86945400-86947600	Enhancers	Breast Myoepithelial Primary Cells	Breast
29	chr7:86945400-86948000	Enhancers	Hela-S3	cervix
30	chr7:86945400-86948800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr7:86945600-86945800	Enhancers	Esophagus	oesophagus
32	chr7:86945600-86945800	Enhancers	Lung	lung
33	chr7:86945600-86946000	Enhancers	Muscle Satellite Cultured Cells	--
34	chr7:86945600-86946000	Enhancers	A549	lung
35	chr7:86945600-86946000	Flanking Active TSS	GM12878-XiMat	blood
36	chr7:86945600-86946400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:86945600-86946400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr7:86945600-86946600	Enhancers	NHLF	lung
39	chr7:86945600-86946800	Enhancers	Osteobl	bone
40	chr7:86945600-86947000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr7:86945600-86947000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr7:86945600-86947200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr7:86945600-86947200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
44	chr7:86945600-86947400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr7:86945600-86947400	Enhancers	NHDF-Ad	bronchial
46	chr7:86945600-86949000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr7:86945800-86946000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr7:86945800-86946200	Flanking Active TSS	NHEK	skin
49	chr7:86945800-86946400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr7:86945800-86946400	Weak transcription	Esophagus	oesophagus

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