Variant report

Variant	nsv889060
Chromosome Location	chr7:112766082-112994137
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1278)
CpG islands
(count:183)
Chromatin interactive
region (count:137)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1278 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:112782280-112783198	K562	blood:	n/a	n/a
2	ARID3A	chr7:112799920-112799963	K562	blood:	n/a	n/a
3	ARID3A	chr7:112903890-112904025	K562	blood:	n/a	n/a
4	ATF1	chr7:112782341-112783153	K562	blood:	n/a	n/a
5	ATF1	chr7:112946391-112946665	K562	blood:	n/a	n/a
6	ATF1	chr7:112842586-112842605	K562	blood:	n/a	n/a
7	ATF1	chr7:112989582-112989666	K562	blood:	n/a	n/a
8	ATF1	chr7:112781184-112781280	K562	blood:	n/a	n/a
9	ATF1	chr7:112845598-112845838	K562	blood:	n/a	n/a
10	ATF1	chr7:112929247-112929556	K562	blood:	n/a	n/a
11	ATF1	chr7:112921615-112921625	K562	blood:	n/a	n/a
12	ATF3	chr7:112782231-112782744	K562	blood:	n/a	n/a
13	ATF3	chr7:112782820-112783360	K562	blood:	n/a	n/a
14	BACH1	chr7:112796528-112796607	K562	blood:	n/a	n/a
15	BACH1	chr7:112799638-112799698	K562	blood:	n/a	n/a
16	BACH1	chr7:112871958-112872067	H1-hESC	embryonic stem cell:	n/a	n/a
17	BATF	chr7:112907423-112907657	GM12878	blood:	n/a	chr7:112907543-112907554
18	BATF	chr7:112907428-112907662	GM12878	blood:	n/a	chr7:112907543-112907554
19	BHLHE40	chr7:112774462-112774848	K562	blood:	n/a	n/a
20	BHLHE40	chr7:112782423-112782732	GM12878	blood:	n/a	n/a
21	BHLHE40	chr7:112971718-112971776	K562	blood:	n/a	n/a
22	BHLHE40	chr7:112957742-112957966	K562	blood:	n/a	chr7:112957843-112957864 chr7:112957849-112957858 chr7:112957849-112957858 chr7:112957848-112957857 chr7:112957847-112957860 chr7:112957850-112957859
23	BHLHE40	chr7:112942154-112942280	K562	blood:	n/a	n/a
24	BHLHE40	chr7:112782355-112783105	K562	blood:	n/a	n/a
25	BHLHE40	chr7:112781201-112781389	K562	blood:	n/a	n/a
26	BHLHE40	chr7:112799942-112800071	K562	blood:	n/a	n/a
27	BHLHE40	chr7:112765800-112766157	K562	blood:	n/a	n/a
28	BHLHE40	chr7:112771611-112771753	K562	blood:	n/a	n/a
29	CBX3	chr7:112782238-112783194	K562	blood:	n/a	n/a
30	CBX3	chr7:112777252-112777666	K562	blood:	n/a	n/a
31	CBX3	chr7:112903066-112903504	K562	blood:	n/a	n/a
32	CBX3	chr7:112910836-112911211	K562	blood:	n/a	n/a
33	CBX3	chr7:112910849-112911183	K562	blood:	n/a	n/a
34	CCNT2	chr7:112782373-112782769	K562	blood:	n/a	n/a
35	CCNT2	chr7:112817053-112817131	K562	blood:	n/a	n/a
36	CEBPB	chr7:112979132-112979407	K562	blood:	n/a	chr7:112979224-112979235 chr7:112979226-112979235 chr7:112979226-112979235 chr7:112979226-112979235 chr7:112979225-112979236 chr7:112979224-112979237 chr7:112979226-112979235
37	CEBPB	chr7:112862875-112862950	H1-hESC	embryonic stem cell:	n/a	chr7:112862925-112862938
38	CEBPB	chr7:112837340-112837695	IMR90	lung:	n/a	n/a
39	CEBPB	chr7:112824236-112824386	HepG2	liver:	n/a	chr7:112824347-112824358
40	CEBPB	chr7:112810718-112811004	K562	blood:	n/a	chr7:112810871-112810882
41	CEBPB	chr7:112849411-112849723	HepG2	liver:	n/a	chr7:112849547-112849558
42	CEBPB	chr7:112796240-112796383	K562	blood:	n/a	n/a
43	CEBPB	chr7:112857375-112857681	K562	blood:	n/a	n/a
44	CEBPB	chr7:112919521-112919545	K562	blood:	n/a	n/a
45	CEBPB	chr7:112798212-112798494	K562	blood:	n/a	chr7:112798332-112798341 chr7:112798330-112798341 chr7:112798330-112798343
46	CEBPB	chr7:112975731-112975761	IMR90	lung:	n/a	chr7:112975743-112975754
47	CEBPB	chr7:112946416-112946690	K562	blood:	n/a	n/a
48	CEBPB	chr7:112870772-112871098	K562	blood:	n/a	chr7:112870926-112870937
49	CEBPB	chr7:112979137-112979342	MCF-7	breast:	n/a	chr7:112979224-112979235 chr7:112979226-112979235 chr7:112979226-112979235 chr7:112979226-112979235 chr7:112979225-112979236 chr7:112979224-112979237 chr7:112979226-112979235
50	CEBPB	chr7:112975641-112975770	A549	lung:	n/a	chr7:112975743-112975754

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:112903509-112903559	NHDF-neo	bronchial:	n/a
2	chr7:112903509-112903559	GM19239	blood:	n/a
3	chr7:112838431-112838481	ovcar-3	ovarian:	n/a
4	chr7:112838431-112838481	NHBE	bronchial:	n/a
5	chr7:112838431-112838481	HCF	heart:	n/a
6	chr7:112903509-112903559	K562	blood:	n/a
7	chr7:112903509-112903559	AG09319	gingival:	n/a
8	chr7:112907863-112907913	HAEpiC	amniotic membrane:	n/a
9	chr7:112903509-112903559	GM12891	blood:	n/a
10	chr7:112838431-112838481	GM06990	blood:	n/a
11	chr7:112838431-112838481	PANC-1	pancreas:	n/a
12	chr7:112838431-112838481	SAEC	small airway:	n/a
13	chr7:112838431-112838481	SK-N-MC	brain:	n/a
14	chr7:112838431-112838481	CMK	blood:	n/a
15	chr7:112838431-112838481	PFSK-1	brain:	n/a
16	chr7:112903509-112903559	NH-A	brain:	n/a
17	chr7:112907863-112907913	NH-A	brain:	n/a
18	chr7:112903509-112903559	NT2-D1	testis:	n/a
19	chr7:112907863-112907913	BJ	skin:	n/a
20	chr7:112903509-112903559	HCF	heart:	n/a
21	chr7:112907863-112907913	AG09319	gingival:	n/a
22	chr7:112838431-112838481	NHDF-neo	bronchial:	n/a
23	chr7:112838431-112838481	K562	blood:	n/a
24	chr7:112838431-112838481	Hela-S3	cervix:	n/a
25	chr7:112907863-112907913	HIPEpiC	eye:	n/a
26	chr7:112907863-112907913	ovcar-3	ovarian:	n/a
27	chr7:112907863-112907913	ECC-1	luminal epithelium:	n/a
28	chr7:112838431-112838481	HCPEpiC	choroid plexus:	n/a
29	chr7:112907863-112907913	CMK	blood:	n/a
30	chr7:112907863-112907913	NHBE	bronchial:	n/a
31	chr7:112907863-112907913	HNPCEpiC	eye:	n/a
32	chr7:112903509-112903559	HRCEpiC	kidney:	n/a
33	chr7:112903509-112903559	GM12892	blood:	n/a
34	chr7:112903509-112903559	AG04449	skin:	fetal
35	chr7:112838431-112838481	ECC-1	luminal epithelium:	n/a
36	chr7:112903509-112903559	HIPEpiC	eye:	n/a
37	chr7:112907863-112907913	HMEC	breast:	n/a
38	chr7:112907863-112907913	H1-hESC	embryonic stem cell:	embryo
39	chr7:112907863-112907913	ProgFib	skin:	n/a
40	chr7:112907863-112907913	SKMC	muscle:	n/a
41	chr7:112903509-112903559	SK-N-SH_RA	brain:	n/a
42	chr7:112838431-112838481	NB4	blood:	n/a
43	chr7:112903509-112903559	NHBE	bronchial:	n/a
44	chr7:112838431-112838481	GM12892	blood:	n/a
45	chr7:112903509-112903559	HepG2	liver:	n/a
46	chr7:112907863-112907913	GM19239	blood:	n/a
47	chr7:112903509-112903559	HL-60	blood:	n/a
48	chr7:112907863-112907913	SAEC	small airway:	n/a
49	chr7:112903509-112903559	ECC-1	luminal epithelium:	n/a
50	chr7:112838431-112838481	AG04449	skin:	fetal

(count:137 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr7:112919908..112922049-chr7:112922331..112926205,3	MCF-7	breast:
2	chr7:112815177..112817865-chr7:112886760..112888811,2	MCF-7	breast:
3	chr7:112766821..112770020-chr7:112775041..112777462,3	K562	blood:
4	chr7:112784710..112787693-chr7:112844784..112846634,2	K562	blood:
5	chr7:112950198..112952565-chr7:112958215..112960663,2	MCF-7	breast:
6	chr7:112757111..112758761-chr7:112957701..112959232,2	K562	blood:
7	chr7:112764896..112766574-chr7:112769155..112770900,2	K562	blood:
8	chr7:112089237..112091482-chr7:112936057..112938859,2	MCF-7	breast:
9	chr7:112838409..112840932-chr7:112848283..112850469,2	K562	blood:
10	chr7:112814988..112817572-chr7:112818025..112820669,3	MCF-7	breast:
11	chr7:112914755..112918139-chr7:112919654..112923102,3	K562	blood:
12	chr7:112953049..112955491-chr7:112958920..112960893,2	K562	blood:
13	chr7:112906062..112908406-chr7:112913079..112914696,2	K562	blood:
14	chr7:112919737..112922659-chr7:112922848..112924621,2	MCF-7	breast:
15	chr7:112768327..112770672-chr7:112770872..112773176,2	K562	blood:
16	chr7:112800339..112803140-chr7:112813993..112816435,2	K562	blood:
17	chr7:112761834..112764773-chr7:112768104..112770317,2	K562	blood:
18	chr7:112841907..112844246-chr7:112847503..112849248,2	K562	blood:
19	chr7:112766932..112769724-chr7:112781846..112784027,2	K562	blood:
20	chr7:112801750..112803685-chr7:112813306..112816042,2	K562	blood:
21	chr7:112797834..112800615-chr7:112802985..112805209,2	K562	blood:
22	chr7:112783216..112786523-chr7:112787566..112792352,4	K562	blood:
23	chr7:112759714..112761754-chr7:112774243..112776920,2	K562	blood:
24	chr7:112853228..112855438-chr7:112868395..112871315,2	K562	blood:
25	chr7:112794632..112797191-chr7:112798095..112799634,2	K562	blood:
26	chr7:112809313..112813953-chr7:112918870..112922668,5	MCF-7	breast:
27	chr7:112801750..112803685-chr7:112813306..112816042,2	K562	blood:
28	chr7:112914755..112918139-chr7:112919654..112923102,3	K562	blood:
29	chr7:112799910..112800953-chr7:113061499..113062556,5	MCF-7	breast:
30	chr7:112882709..112884579-chr7:112885752..112887740,2	K562	blood:
31	chr7:112682248..112683838-chr7:112894672..112896979,2	K562	blood:
32	chr7:112774443..112776033-chr7:112801887..112803509,2	K562	blood:
33	chr7:112841354..112843011-chr7:112844071..112845692,2	K562	blood:
34	chr7:112778989..112780490-chr7:112780963..112783093,2	MCF-7	breast:
35	chr7:112811148..112812106-chr7:112921056..112921827,2	MCF-7	breast:
36	chr7:112887063..112887777-chr7:112921303..112922004,3	MCF-7	breast:
37	chr7:112760783..112762888-chr7:112763603..112766165,2	K562	blood:
38	chr7:112934260..112936230-chr7:112936620..112938273,2	MCF-7	breast:
39	chr7:112764896..112766469-chr7:112769155..112770793,2	K562	blood:
40	chr7:112794632..112797191-chr7:112798095..112799634,2	K562	blood:
41	chr7:112856306..112858069-chr7:112863291..112865541,2	K562	blood:
42	chr7:112903603..112905709-chr7:112919936..112922248,2	K562	blood:
43	chr7:112811150..112812144-chr7:112920712..112921503,2	MCF-7	breast:
44	chr7:112788647..112791637-chr7:112793429..112795616,2	K562	blood:
45	chr7:112849832..112851498-chr7:112857060..112858734,2	K562	blood:
46	chr7:112756052..112760979-chr7:112769891..112772947,5	K562	blood:
47	chr7:112815199..112817636-chr7:112823311..112824921,2	MCF-7	breast:
48	chr7:112854163..112856387-chr7:112856648..112858157,2	MCF-7	breast:
49	chr7:112769278..112771459-chr7:113340632..113343613,2	K562	blood:
50	chr7:112760083..112762482-chr7:112787454..112790230,2	MCF-7	breast:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC073348.1-1	chr7:112785071-112785213	ENSG00000225457.1
2	lnc-AC073348.1-1	chr7:112785718-112785964	NONHSAT122814
3	lnc-AC073348.1-1	chr7:112786095-112786385	ENSG00000225457.1
4	lnc-AC073348.1-1	chr7:112785721-112785830	ENSG00000225457.1
5	lnc-AC073348.1-1	chr7:112785718-112786095	ENSG00000225457.1

No data

Variant related genes	Relation type
ENSG00000225457	TF binding region
ENSG00000225457	CpG island
ENSG00000006652	chromatin interactions
ENSG00000214194	chromatin interactions
ENSG00000225457	chromatin interactions

Extended variants
information (count: 4212 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:4212 , 50 per page) page: 1 2 3 4 5 6 7 ... 85

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2246845	chr7:112766082-112766083	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs545089020	chr7:112766104-112766105	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs564491599	chr7:112766218-112766219	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs557046060	chr7:112766253-112766254	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs184769298	chr7:112766260-112766261	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs543274257	chr7:112766268-112766269	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs561981570	chr7:112766305-112766306	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs189229598	chr7:112766363-112766364	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs541343370	chr7:112766364-112766365	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs559386806	chr7:112766373-112766374	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs532995007	chr7:112766380-112766381	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs78492663	chr7:112766383-112766384	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs550390084	chr7:112766393-112766394	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs146939239	chr7:112766447-112766448	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs369546999	chr7:112766467-112766468	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs138524693	chr7:112766476-112766477	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs549298150	chr7:112766505-112766506	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs191416809	chr7:112766515-112766516	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs529777005	chr7:112766566-112766567	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs535005078	chr7:112766694-112766695	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs118053422	chr7:112766792-112766793	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs571267141	chr7:112766794-112766795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs546742817	chr7:112766842-112766843	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs184310719	chr7:112766843-112766844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs538889298	chr7:112766854-112766855	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs568917952	chr7:112766894-112766895	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs7808251	chr7:112766914-112766915	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs190027171	chr7:112766931-112766932	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs34280976	chr7:112766943-112766944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs554017675	chr7:112766944-112766945	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs144143587	chr7:112766963-112766964	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs147296124	chr7:112766973-112766974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs569266751	chr7:112766994-112766995	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs577662480	chr7:112767016-112767017	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs181282755	chr7:112767026-112767027	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs140877630	chr7:112767056-112767057	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs370940205	chr7:112767064-112767065	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs549108992	chr7:112767087-112767088	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs141522967	chr7:112767116-112767117	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs186345802	chr7:112767148-112767149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs546843587	chr7:112767215-112767216	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs554743249	chr7:112767267-112767268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs375977009	chr7:112767338-112767339	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs571628693	chr7:112767434-112767435	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs538613813	chr7:112767441-112767442	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs150843542	chr7:112767589-112767590	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs568937340	chr7:112767603-112767604	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs112113158	chr7:112767609-112767610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs534046269	chr7:112767624-112767625	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs554298921	chr7:112767695-112767696	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Myelofibrosis	22110671	CNVD
Squamous cell cancer	20885788	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16397240	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Autism	19401682	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
small cell lung cancer	20016488	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Chordoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:318 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:112761800-112767000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:112767000-112767200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr7:112767000-112768800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:112767200-112768200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr7:112768000-112768600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr7:112768000-112768600	Enhancers	NHEK	skin
7	chr7:112768200-112768600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr7:112768200-112768600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr7:112768200-112768600	Active TSS	Lung	lung
10	chr7:112768400-112768600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr7:112768800-112773800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr7:112773800-112774800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr7:112775800-112776200	Enhancers	Stomach Mucosa	stomach
14	chr7:112776400-112776800	Weak transcription	K562	blood
15	chr7:112776800-112778200	ZNF genes & repeats	K562	blood
16	chr7:112778200-112779000	Weak transcription	K562	blood
17	chr7:112779000-112779600	Enhancers	K562	blood
18	chr7:112779400-112785800	Enhancers	Primary hematopoietic stem cells short term culture	blood
19	chr7:112779600-112780400	Weak transcription	K562	blood
20	chr7:112780400-112781200	Genic enhancers	K562	blood
21	chr7:112781200-112782200	Enhancers	K562	blood
22	chr7:112781400-112782000	Enhancers	Brain Germinal Matrix	brain
23	chr7:112781400-112783400	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr7:112781800-112786200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr7:112782000-112782800	Weak transcription	Brain Germinal Matrix	brain
26	chr7:112782000-112783000	Enhancers	H1 Cell Line	embryonic stem cell
27	chr7:112782000-112784400	Enhancers	Primary monocytes fromperipheralblood	blood
28	chr7:112782200-112782800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr7:112782200-112783000	Enhancers	Fetal Brain Female	brain
30	chr7:112782200-112783200	Enhancers	Primary B cells from peripheral blood	blood
31	chr7:112782200-112783200	Flanking Active TSS	K562	blood
32	chr7:112782200-112783800	Enhancers	Monocytes-CD14+_RO01746	blood
33	chr7:112782400-112782800	Enhancers	Brain Anterior Caudate	brain
34	chr7:112782600-112783200	Enhancers	Brain Angular Gyrus	brain
35	chr7:112782600-112784600	Enhancers	GM12878-XiMat	blood
36	chr7:112782800-112783000	Enhancers	Fetal Brain Male	brain
37	chr7:112782800-112783600	Weak transcription	Brain Anterior Caudate	brain
38	chr7:112782800-112784000	Enhancers	Brain Germinal Matrix	brain
39	chr7:112782800-112786000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr7:112783000-112783600	Weak transcription	Fetal Brain Male	brain
41	chr7:112783000-112784400	Enhancers	Brain Hippocampus Middle	brain
42	chr7:112783200-112783600	Weak transcription	Primary B cells from peripheral blood	blood
43	chr7:112783200-112783600	Weak transcription	Brain Angular Gyrus	brain
44	chr7:112783200-112785800	Enhancers	K562	blood
45	chr7:112783600-112783800	Enhancers	Brain Anterior Caudate	brain
46	chr7:112783600-112784200	Enhancers	Brain Angular Gyrus	brain
47	chr7:112783600-112784400	Enhancers	Primary B cells from peripheral blood	blood
48	chr7:112783600-112784400	Enhancers	Fetal Brain Male	brain
49	chr7:112783800-112784400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
50	chr7:112783800-112785000	Weak transcription	Brain Anterior Caudate	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links