Variant report

Variant	nsv889120
Chromosome Location	chr7:120691417-120800837
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1850)
CpG islands
(count:549)
Chromatin interactive
region (count:196)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1850 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:120719901-120720326	K562	blood:	n/a	n/a
2	ARID3A	chr7:120778432-120778625	K562	blood:	n/a	n/a
3	ARID3A	chr7:120719020-120719586	K562	blood:	n/a	n/a
4	ARID3A	chr7:120711748-120712087	K562	blood:	n/a	n/a
5	ARID3A	chr7:120723039-120723664	K562	blood:	n/a	n/a
6	ARID3A	chr7:120747983-120748273	K562	blood:	n/a	n/a
7	ARID3A	chr7:120709444-120709898	K562	blood:	n/a	n/a
8	ARID3A	chr7:120800023-120800487	K562	blood:	n/a	n/a
9	ARID3A	chr7:120724896-120725031	K562	blood:	n/a	n/a
10	ARID3A	chr7:120715862-120717615	K562	blood:	n/a	n/a
11	ARID3A	chr7:120695431-120695493	K562	blood:	n/a	n/a
12	ARID3A	chr7:120714923-120715159	K562	blood:	n/a	n/a
13	ARID3A	chr7:120735693-120736439	K562	blood:	n/a	chr7:120736063-120736079
14	ARID3A	chr7:120720624-120722162	K562	blood:	n/a	n/a
15	ARID3A	chr7:120709160-120709188	K562	blood:	n/a	n/a
16	ARID3A	chr7:120721437-120721773	HepG2	liver:	n/a	n/a
17	ARID3A	chr7:120724859-120725121	HepG2	liver:	n/a	n/a
18	ATF1	chr7:120741816-120741840	K562	blood:	n/a	n/a
19	ATF1	chr7:120721397-120721954	K562	blood:	n/a	n/a
20	ATF1	chr7:120778322-120778731	K562	blood:	n/a	n/a
21	ATF1	chr7:120799677-120800576	K562	blood:	n/a	n/a
22	ATF1	chr7:120716345-120716834	K562	blood:	n/a	n/a
23	ATF2	chr7:120778230-120778840	GM12878	blood:	n/a	n/a
24	ATF2	chr7:120778277-120778721	GM12878	blood:	n/a	n/a
25	ATF3	chr7:120778265-120778713	K562	blood:	n/a	n/a
26	ATF3	chr7:120723078-120723515	K562	blood:	n/a	n/a
27	ATF3	chr7:120716978-120717420	K562	blood:	n/a	n/a
28	ATF3	chr7:120715926-120716892	K562	blood:	n/a	n/a
29	ATF3	chr7:120800134-120800510	K562	blood:	n/a	n/a
30	BACH1	chr7:120724172-120724174	K562	blood:	n/a	n/a
31	BACH1	chr7:120716017-120716863	K562	blood:	n/a	chr7:120716591-120716605
32	BACH1	chr7:120723323-120723346	K562	blood:	n/a	n/a
33	BACH1	chr7:120771434-120771460	K562	blood:	n/a	n/a
34	BACH1	chr7:120705589-120705605	K562	blood:	n/a	n/a
35	BACH1	chr7:120779259-120779282	K562	blood:	n/a	n/a
36	BACH1	chr7:120698149-120698173	K562	blood:	n/a	n/a
37	BACH1	chr7:120736364-120736379	K562	blood:	n/a	n/a
38	BACH1	chr7:120722246-120722371	K562	blood:	n/a	n/a
39	BCL3	chr7:120716255-120716969	K562	blood:	n/a	n/a
40	BCLAF1	chr7:120716170-120717427	K562	blood:	n/a	n/a
41	BCLAF1	chr7:120720782-120722254	K562	blood:	n/a	n/a
42	BCLAF1	chr7:120716200-120717203	K562	blood:	n/a	n/a
43	BHLHE40	chr7:120748070-120748317	GM12878	blood:	n/a	n/a
44	BHLHE40	chr7:120777877-120777906	K562	blood:	n/a	n/a
45	BHLHE40	chr7:120718164-120718364	K562	blood:	n/a	n/a
46	BHLHE40	chr7:120723237-120723459	K562	blood:	n/a	n/a
47	BHLHE40	chr7:120800243-120800443	K562	blood:	n/a	n/a
48	BHLHE40	chr7:120718760-120720201	K562	blood:	n/a	n/a
49	BHLHE40	chr7:120778436-120778667	K562	blood:	n/a	n/a
50	BHLHE40	chr7:120778337-120778832	GM12878	blood:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:120701829-120701879	AG10803	skin:	n/a
2	chr7:120725046-120725096	H1-hESC	embryonic stem cell:	embryo
3	chr7:120704511-120704561	NB4	blood:	n/a
4	chr7:120716340-120716390	SKMC	muscle:	n/a
5	chr7:120716340-120716390	HUVEC	blood vessel:	n/a
6	chr7:120701829-120701879	AoSMC	blood vessel:	n/a
7	chr7:120721606-120721656	GM12878	blood:	n/a
8	chr7:120704511-120704561	HPAEpiC	pulmonary alveolar:	n/a
9	chr7:120725046-120725096	MCF10A-Er-Src	breast:	n/a
10	chr7:120716269-120716319	HCT-116	colon:	n/a
11	chr7:120725046-120725096	HPAEpiC	pulmonary alveolar:	n/a
12	chr7:120716269-120716319	RPTEC	kidney:	n/a
13	chr7:120742600-120742650	ProgFib	skin:	n/a
14	chr7:120704511-120704561	HAEpiC	amniotic membrane:	n/a
15	chr7:120725046-120725096	HEK293	kidney:	embryo
16	chr7:120725046-120725096	HNPCEpiC	eye:	n/a
17	chr7:120702049-120702099	NB4	blood:	n/a
18	chr7:120721606-120721656	AG04449	skin:	fetal
19	chr7:120716340-120716390	ProgFib	skin:	n/a
20	chr7:120721606-120721656	IMR90	lung:	fetal
21	chr7:120716340-120716390	PFSK-1	brain:	n/a
22	chr7:120716269-120716319	HRE	kidney:	n/a
23	chr7:120742600-120742650	HEEpiC	esophagus:	n/a
24	chr7:120704511-120704561	MCF-7	breast:	n/a
25	chr7:120701117-120701167	Hepatocyte	liver:	n/a
26	chr7:120742600-120742650	NH-A	brain:	n/a
27	chr7:120716340-120716390	GM12878	blood:	n/a
28	chr7:120721606-120721656	HIPEpiC	eye:	n/a
29	chr7:120701117-120701167	MCF-7	breast:	n/a
30	chr7:120704511-120704561	HepG2	liver:	n/a
31	chr7:120701117-120701167	HRE	kidney:	n/a
32	chr7:120742600-120742650	AG04449	skin:	fetal
33	chr7:120716269-120716319	GM12891	blood:	n/a
34	chr7:120701829-120701879	HNPCEpiC	eye:	n/a
35	chr7:120742600-120742650	BE2_C	brain:	n/a
36	chr7:120701117-120701167	LNCaP	prostate:	n/a
37	chr7:120704511-120704561	SK-N-SH_RA	brain:	n/a
38	chr7:120742600-120742650	Caco-2	colon:	n/a
39	chr7:120725046-120725096	CMK	blood:	n/a
40	chr7:120702049-120702099	Caco-2	colon:	n/a
41	chr7:120721606-120721656	BE2_C	brain:	n/a
42	chr7:120704511-120704561	A549	lung:	n/a
43	chr7:120725046-120725096	HMEC	breast:	n/a
44	chr7:120721606-120721656	U87	brain:	n/a
45	chr7:120716269-120716319	HEK293	kidney:	embryo
46	chr7:120721606-120721656	SK-N-MC	brain:	n/a
47	chr7:120721606-120721656	Caco-2	colon:	n/a
48	chr7:120701829-120701879	HCM	heart:	n/a
49	chr7:120721606-120721656	A549	lung:	n/a
50	chr7:120716340-120716390	AG04450	lung:	fetal

(count:196 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr7:120431063..120433784-chr7:120719676..120721817,4	K562	blood:
2	chr7:120766449..120767437-chr7:120977220..120978039,4	MCF-7	breast:
3	chr7:120695659..120698795-chr7:120708123..120711912,4	K562	blood:
4	chr7:120742066..120743891-chr7:120758680..120761342,2	K562	blood:
5	chr7:120718771..120721283-chr7:120791408..120793421,2	K562	blood:
6	chr7:120762968..120765297-chr7:120774508..120778182,3	K562	blood:
7	chr7:120778509..120781370-chr7:120785067..120788347,3	K562	blood:
8	chr7:120800390..120802719-chr7:120816367..120819301,2	K562	blood:
9	chr7:120697778..120699427-chr7:120715523..120718079,2	K562	blood:
10	chr7:120745612..120749676-chr7:120751128..120754629,5	K562	blood:
11	chr7:120633517..120635365-chr7:120747821..120749395,2	K562	blood:
12	chr7:120677155..120680507-chr7:120717086..120719349,5	K562	blood:
13	chr7:120739177..120742283-chr7:120745711..120747787,4	K562	blood:
14	chr7:120627916..120631226-chr7:120738829..120742113,4	K562	blood:
15	chr7:120692179..120694802-chr7:120701783..120703966,2	K562	blood:
16	chr7:120589647..120592092-chr7:120755972..120758448,2	K562	blood:
17	chr7:120703590..120707044-chr7:120707756..120711872,8	K562	blood:
18	chr7:120689743..120691904-chr7:120700225..120703183,2	K562	blood:
19	chr7:120743098..120745031-chr7:120746646..120748514,3	K562	blood:
20	chr7:120764507..120766599-chr7:120781831..120784588,2	K562	blood:
21	chr7:120627337..120628312-chr7:120722622..120723538,2	K562	blood:
22	chr7:120617320..120619610-chr7:120694736..120697163,2	K562	blood:
23	chr7:120696002..120698090-chr7:120700790..120703179,3	K562	blood:
24	chr7:120692006..120694534-chr7:120721905..120723814,2	K562	blood:
25	chr7:120627324..120628605-chr7:120721070..120722307,12	K562	blood:
26	chr7:120729541..120731923-chr7:120745410..120747271,2	K562	blood:
27	chr7:120736411..120739349-chr7:120753107..120754976,2	K562	blood:
28	chr7:120589698..120592018-chr7:120727687..120730624,2	K562	blood:
29	chr7:120739177..120742283-chr7:120745711..120747787,4	K562	blood:
30	chr7:120680122..120681952-chr7:120727272..120728827,2	K562	blood:
31	chr7:120627648..120628254-chr7:120721307..120722315,3	MCF-7	breast:
32	chr7:120788426..120790789-chr7:120791125..120793163,2	K562	blood:
33	chr7:120692726..120696134-chr7:120727225..120730666,4	K562	blood:
34	chr7:120658347..120660022-chr7:120787197..120789297,2	K562	blood:
35	chr7:120627247..120628312-chr7:120721151..120721990,7	MCF-7	breast:
36	chr7:120589479..120591049-chr7:120760761..120762508,2	MCF-7	breast:
37	chr7:120651629..120654433-chr7:120773346..120775726,2	K562	blood:
38	chr7:120692006..120694534-chr7:120721905..120723814,2	K562	blood:
39	chr7:120589600..120593889-chr7:120719099..120726294,8	K562	blood:
40	chr7:120627766..120628441-chr7:120718933..120719627,2	MCF-7	breast:
41	chr7:120734442..120735992-chr7:120738253..120740799,2	K562	blood:
42	chr7:120628746..120630644-chr7:120748164..120750985,2	K562	blood:
43	chr7:120687520..120689259-chr7:120697389..120698977,2	K562	blood:
44	chr7:120672832..120675246-chr7:120709384..120712309,2	K562	blood:
45	chr7:120589832..120592601-chr7:120735564..120737792,2	K562	blood:
46	chr7:120629049..120631832-chr7:120732281..120734682,3	K562	blood:
47	chr7:120701678..120704158-chr7:120722578..120725881,3	K562	blood:
48	chr7:120774713..120776221-chr7:120777852..120779454,2	K562	blood:
49	chr7:120773227..120776221-chr7:120776532..120780949,5	K562	blood:
50	chr7:120732885..120735517-chr7:120747045..120751097,5	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ING3-6	chr7:120702382-120702597	expReg_chr7_8599_+

No data

Variant related genes	Relation type
CPED1	TF binding region
RNA5SP241	TF binding region
CPED1	CpG island
RNA5SP241	CpG island
ENSG00000196937	chromatin interactions
ENSG00000106034	chromatin interactions
ENSG00000071243	chromatin interactions
ENSG00000234927	chromatin interactions
ENSG00000115875	chromatin interactions
ENSG00000212628	chromatin interactions
ENSG00000202225	chromatin interactions

Extended variants
information (count: 4017 )
Associated
traits (count: 94 )

Variant overlapped rSNPs/rCNVs (count:4017 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs35482486	chr7:120691424-120691425	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs398006041	chr7:120691436-120691437	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs559275201	chr7:120691458-120691459	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs551274465	chr7:120691491-120691492	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs568382000	chr7:120691507-120691508	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs184534642	chr7:120691629-120691630	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs551368120	chr7:120691723-120691724	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs140555036	chr7:120691756-120691757	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs530443908	chr7:120691838-120691839	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs374604890	chr7:120691880-120691881	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs550113062	chr7:120691904-120691905	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs567032404	chr7:120691930-120691931	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs200533558	chr7:120692019-120692020	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs147079063	chr7:120692103-120692104	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs147751372	chr7:120692116-120692117	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs368743875	chr7:120692131-120692132	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs571318902	chr7:120692228-120692229	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs539355227	chr7:120692312-120692313	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs559308456	chr7:120692337-120692338	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs6466764	chr7:120692363-120692364	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
21	rs2721331	chr7:120692384-120692385	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs554965390	chr7:120692391-120692392	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs376286646	chr7:120692421-120692422	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs112475037	chr7:120692435-120692436	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs142659016	chr7:120692467-120692468	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs187452269	chr7:120692471-120692472	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs192913193	chr7:120692515-120692516	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs184954265	chr7:120692556-120692557	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs545158084	chr7:120692627-120692628	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs374066708	chr7:120692727-120692728	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs79847834	chr7:120692732-120692733	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs530676372	chr7:120692765-120692766	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs188500304	chr7:120692773-120692774	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs374764026	chr7:120692801-120692802	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs181637063	chr7:120692820-120692821	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs374695976	chr7:120692837-120692838	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
37	rs552673956	chr7:120692854-120692855	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs184244305	chr7:120692861-120692862	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs369364487	chr7:120692888-120692889	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs189397116	chr7:120692892-120692893	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs181955926	chr7:120692922-120692923	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs113157542	chr7:120692928-120692929	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs552758371	chr7:120692933-120692934	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs571346454	chr7:120692938-120692939	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs371594182	chr7:120693006-120693007	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs569583521	chr7:120693044-120693045	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs538533007	chr7:120693133-120693134	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs77075159	chr7:120693171-120693172	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs138412000	chr7:120693174-120693175	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs534160090	chr7:120693229-120693230	Weak transcription Strong transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:94)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19401682	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21922591	CNVD
Hepatocellular carcinoma	16785998	CNVD
Glioblastoma multiforme	18628472	CNVD
Myelofibrosis	22110671	CNVD
Renal cell carcinoma	18194544	CNVD
Basal cell lymphoma	21115979	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21509527	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD

Chromatin state (count:1095 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120673800-120694200	Weak transcription	Rectal Smooth Muscle	rectum
2	chr7:120682200-120695800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr7:120682400-120719600	Weak transcription	Fetal Lung	lung
4	chr7:120682600-120692000	Weak transcription	Fetal Stomach	stomach
5	chr7:120682800-120700800	Weak transcription	Fetal Kidney	kidney
6	chr7:120684000-120694000	Weak transcription	Small Intestine	intestine
7	chr7:120687800-120706600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr7:120689600-120709400	Weak transcription	HSMMtube	muscle
9	chr7:120689800-120698200	Weak transcription	Spleen	Spleen
10	chr7:120690200-120692000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr7:120690200-120696200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr7:120690200-120709000	Weak transcription	Right Ventricle	heart
13	chr7:120690200-120709400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr7:120690400-120692200	Weak transcription	HSMM	muscle
15	chr7:120690400-120693200	Weak transcription	Fetal Heart	heart
16	chr7:120690400-120694000	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr7:120690400-120704200	Weak transcription	Colon Smooth Muscle	Colon
18	chr7:120690400-120704400	Weak transcription	NHDF-Ad	bronchial
19	chr7:120690400-120709000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr7:120690600-120709200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr7:120690800-120693000	Strong transcription	Ovary	ovary
22	chr7:120691000-120693400	Weak transcription	Monocytes-CD14+_RO01746	blood
23	chr7:120691200-120692000	Weak transcription	Left Ventricle	heart
24	chr7:120691200-120692000	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr7:120691200-120692200	Weak transcription	Psoas Muscle	Psoas
26	chr7:120691200-120694000	Weak transcription	Skeletal Muscle Male	skeletal muscle
27	chr7:120691200-120696200	Weak transcription	NHLF	lung
28	chr7:120691200-120702000	Weak transcription	Liver	Liver
29	chr7:120691200-120703400	Weak transcription	Aorta	Aorta
30	chr7:120691200-120709000	Weak transcription	Adipose Nuclei	Adipose
31	chr7:120691400-120693400	Strong transcription	K562	blood
32	chr7:120692000-120692400	Enhancers	Skeletal Muscle Female	skeletal muscle
33	chr7:120692000-120692800	Strong transcription	Left Ventricle	heart
34	chr7:120692000-120693000	Strong transcription	Fetal Stomach	stomach
35	chr7:120692000-120693400	Strong transcription	Stomach Smooth Muscle	stomach
36	chr7:120692200-120692600	Enhancers	Psoas Muscle	Psoas
37	chr7:120692200-120695000	Strong transcription	HSMM	muscle
38	chr7:120692400-120692600	Genic enhancers	Skeletal Muscle Female	skeletal muscle
39	chr7:120692600-120698200	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr7:120692800-120719000	Weak transcription	Left Ventricle	heart
41	chr7:120693000-120702000	Weak transcription	Ovary	ovary
42	chr7:120693000-120704400	Weak transcription	Fetal Stomach	stomach
43	chr7:120693400-120695200	Genic enhancers	K562	blood
44	chr7:120693400-120704200	Weak transcription	Stomach Smooth Muscle	stomach
45	chr7:120694000-120694200	Enhancers	Duodenum Smooth Muscle	Duodenum
46	chr7:120694000-120695000	Enhancers	Skeletal Muscle Male	skeletal muscle
47	chr7:120695000-120695400	Enhancers	GM12878-XiMat	blood
48	chr7:120695000-120696200	Weak transcription	HSMM	muscle
49	chr7:120695000-120699000	Weak transcription	Skeletal Muscle Male	skeletal muscle
50	chr7:120695200-120696400	Weak transcription	K562	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links