Variant report

Variant	nsv889242
Chromosome Location	chr7:137005808-137081223
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BRCA1	chr7:137028122-137028571	H1-hESC	embryonic stem cell:	n/a	n/a
2	CEBPB	chr7:137045234-137045532	HepG2	liver:	n/a	n/a
3	CEBPB	chr7:137020635-137020980	IMR90	lung:	n/a	n/a
4	CEBPB	chr7:137045229-137045498	IMR90	lung:	n/a	n/a
5	CEBPB	chr7:137020688-137020924	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr7:137023922-137024163	A549	lung:	n/a	n/a
7	CEBPB	chr7:137045231-137045550	MCF-7	breast:	n/a	n/a
8	CEBPB	chr7:137055367-137055677	IMR90	lung:	n/a	n/a
9	CEBPB	chr7:137045222-137045452	H1-hESC	embryonic stem cell:	n/a	n/a
10	CEBPB	chr7:137023871-137024074	HepG2	liver:	n/a	n/a
11	CEBPB	chr7:137023920-137024145	IMR90	lung:	n/a	n/a
12	CEBPB	chr7:137045246-137045495	Hela-S3	cervix:	n/a	n/a
13	CEBPZ	chr7:137044945-137045132	HepG2	liver:	n/a	n/a
14	CHD2	chr7:137028267-137028479	H1-hESC	embryonic stem cell:	n/a	n/a
15	CTBP2	chr7:137028095-137028618	H1-hESC	embryonic stem cell:	n/a	n/a
16	CTCF	chr7:137022801-137022942	K562	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
17	CTCF	chr7:137022780-137022930	Caco-2	colon:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
18	CTCF	chr7:137022780-137022930	HRE	kidney:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
19	CTCF	chr7:137022820-137022970	AG09319	gingival:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
20	CTCF	chr7:137022800-137022950	HCFaa	heart:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
21	CTCF	chr7:137022540-137022690	HBMEC	blood vessel:	n/a	n/a
22	CTCF	chr7:137022640-137022790	HVMF	connective:	n/a	n/a
23	CTCF	chr7:137028300-137028450	HMEC	breast:	n/a	n/a
24	CTCF	chr7:137022720-137022870	GM12865	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
25	CTCF	chr7:137008548-137008569	GM20000	blood:	n/a	n/a
26	CTCF	chr7:137022760-137022910	AG10803	skin:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
27	CTCF	chr7:137022774-137022905	GM19238	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
28	CTCF	chr7:137022791-137022948	GM12878	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
29	CTCF	chr7:137028160-137028310	SK-N-SH_RA	brain:	n/a	n/a
30	CTCF	chr7:137022640-137022790	AG04450	lung:	n/a	n/a
31	CTCF	chr7:137022760-137022910	SK-N-SH_RA	brain:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
32	CTCF	chr7:137022740-137022890	HL-60	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
33	CTCF	chr7:137022800-137022881	GM19240	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
34	CTCF	chr7:137022780-137022930	BE2_C	brain:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
35	CTCF	chr7:137022800-137022950	Hela-S3	cervix:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
36	CTCF	chr7:137022780-137022930	HBMEC	blood vessel:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
37	CTCF	chr7:137025360-137025510	GM12869	blood:	n/a	n/a
38	CTCF	chr7:137022780-137022930	HCPEpiC	choroid plexus:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
39	CTCF	chr7:137022800-137022950	HRPEpiC	eye:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
40	CTCF	chr7:137049297-137049354	LNCaP	prostate:	n/a	n/a
41	CTCF	chr7:137022760-137022910	GM12875	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
42	CTCF	chr7:137022800-137022950	HFF	foreskin:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
43	CTCF	chr7:137028480-137028630	SK-N-SH_RA	brain:	n/a	n/a
44	CTCF	chr7:137022820-137022970	HRE	kidney:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
45	CTCF	chr7:137022808-137022866	GM12892	blood:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
46	CTCF	chr7:137022784-137022937	Hela-S3	cervix:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
47	CTCF	chr7:137022840-137022990	AG09319	gingival:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
48	CTCF	chr7:137048651-137048721	LNCaP	prostate:	n/a	n/a
49	CTCF	chr7:137022755-137022957	MCF-7	breast:	n/a	chr7:137022848-137022866 chr7:137022843-137022864
50	CTCF	chr7:137022800-137022950	NHLF	lung:	n/a	chr7:137022848-137022866 chr7:137022843-137022864

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:137071850-137071900	HEEpiC	esophagus:	n/a
2	chr7:137028617-137028667	HEK293	kidney:	embryo
3	chr7:137071850-137071900	HEEpiC	esophagus:	n/a
4	chr7:137028617-137028667	HEK293	kidney:	embryo
5	chr7:137029097-137029147	SK-N-SH	brain:	n/a
6	chr7:137028165-137028215	BJ	skin:	n/a
7	chr7:137011196-137011246	LNCaP	prostate:	n/a
8	chr7:137028165-137028215	HCF	heart:	n/a
9	chr7:137013465-137013515	HEK293	kidney:	embryo
10	chr7:137028442-137028492	HCM	heart:	n/a
11	chr7:137028410-137028460	AG10803	skin:	n/a
12	chr7:137027135-137027185	GM06990	blood:	n/a
13	chr7:137029097-137029147	PANC-1	pancreas:	n/a
14	chr7:137032114-137032164	SK-N-MC	brain:	n/a
15	chr7:137028410-137028460	HRE	kidney:	n/a
16	chr7:137028442-137028492	PANC-1	pancreas:	n/a
17	chr7:137028546-137028596	T-47D	breast:	n/a
18	chr7:137028617-137028667	A549	lung:	n/a
19	chr7:137029097-137029147	K562	blood:	n/a
20	chr7:137027135-137027185	Hela-S3	cervix:	n/a
21	chr7:137028535-137028585	RPTEC	kidney:	n/a
22	chr7:137028604-137028654	HRPEpiC	eye:	n/a
23	chr7:137028535-137028585	H1-hESC	embryonic stem cell:	embryo
24	chr7:137013465-137013515	AG04450	lung:	fetal
25	chr7:137075954-137076004	GM12892	blood:	n/a
26	chr7:137013465-137013515	CMK	blood:	n/a
27	chr7:137028389-137028439	HCM	heart:	n/a
28	chr7:137028198-137028248	GM06990	blood:	n/a
29	chr7:137028165-137028215	HRPEpiC	eye:	n/a
30	chr7:137027135-137027185	IMR90	lung:	fetal
31	chr7:137032114-137032164	LNCaP	prostate:	n/a
32	chr7:137011196-137011246	AoSMC	blood vessel:	n/a
33	chr7:137028442-137028492	AG09309	skin:	n/a
34	chr7:137032114-137032164	SAEC	small airway:	n/a
35	chr7:137013465-137013515	HUVEC	blood vessel:	n/a
36	chr7:137028442-137028492	SAEC	small airway:	n/a
37	chr7:137028198-137028248	AG09319	gingival:	n/a
38	chr7:137028389-137028439	AG09309	skin:	n/a
39	chr7:137028546-137028596	Hela-S3	cervix:	n/a
40	chr7:137028442-137028492	NT2-D1	testis:	n/a
41	chr7:137028442-137028492	NHDF-neo	bronchial:	n/a
42	chr7:137028442-137028492	HAEpiC	amniotic membrane:	n/a
43	chr7:137028389-137028439	HPAEpiC	pulmonary alveolar:	n/a
44	chr7:137013465-137013515	GM12878	blood:	n/a
45	chr7:137028165-137028215	ECC-1	luminal epithelium:	n/a
46	chr7:137032114-137032164	HIPEpiC	eye:	n/a
47	chr7:137013465-137013515	SK-N-SH	brain:	n/a
48	chr7:137028972-137029022	SK-N-SH_RA	brain:	n/a
49	chr7:137011196-137011246	HMEC	breast:	n/a
50	chr7:137028165-137028215	CMK	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr7:136853636..136854568-chr7:137022322..137023760,5	MCF-7	breast:
2	chr7:137066170..137068802-chr7:137069316..137071052,2	K562	blood:
3	chr7:136853684..136854424-chr7:137022605..137023178,2	MCF-7	breast:
4	chr7:137026451..137029166-chr7:137034024..137036129,2	K562	blood:
5	chr7:137066170..137068802-chr7:137069316..137071052,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PTN-1	chr7:137029676-137029876	XLOC_006620
2	lnc-PTN-1	chr7:137035115-137035216	XLOC_006620
3	lnc-PTN-1	chr7:137035099-137035212	NONHSAT123582
4	lnc-PTN-1	chr7:137037223-137037354	ENSG00000228031.2
5	lnc-PTN-1	chr7:137037223-137037354	NONHSAT123582
6	lnc-PTN-1	chr7:137039108-137039229	ENSG00000228031.2
7	lnc-PTN-1	chr7:137037223-137037354	XLOC_006620
8	lnc-PTN-1	chr7:137029676-137029876	ENSG00000228031.2
9	lnc-PTN-1	chr7:137035115-137035212	ENSG00000228031.2
10	lnc-CHRM2-3	chr7:137065787-137068924	NONHSAT123583
11	lnc-PTN-1	chr7:137039108-137039229	XLOC_006620
12	lnc-CHRM2-1	chr7:137010132-137011700	ENSG00000231114
13	lnc-PTN-1	chr7:137039108-137039144	NONHSAT123582

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	DGKI	hsa-miR-26b-5p	chr7:137074394-137074416

Variant related genes	Relation type
PTN	TF binding region
ENSG00000231114	TF binding region
ENSG00000228031	TF binding region
DGKI	TF binding region
PTN	CpG island
ENSG00000231114	CpG island
ENSG00000228031	CpG island
DGKI	CpG island
ENSG00000105894	chromatin interactions
ADARB1	miRNA target sites
SEC61A1	miRNA target sites
NSF	miRNA target sites
RAD51	miRNA target sites

Extended variants
information (count: 2265 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:2265 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2242045	chr7:137005808-137005809	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs111369408	chr7:137005829-137005830	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs552775269	chr7:137005830-137005831	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs566313141	chr7:137005831-137005832	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs573032292	chr7:137005849-137005850	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs189048634	chr7:137005857-137005858	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs554734961	chr7:137005862-137005863	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs193266278	chr7:137005873-137005874	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs79040836	chr7:137005875-137005876	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs557313124	chr7:137005878-137005879	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs577658170	chr7:137005884-137005885	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs546499176	chr7:137005903-137005904	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs322332	chr7:137005911-137005912	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs74754088	chr7:137005948-137005949	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs143865322	chr7:137005983-137005984	Weak transcription Enhancers Genic enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs148596887	chr7:137006001-137006002	Weak transcription Genic enhancers Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs530540463	chr7:137006002-137006003	Weak transcription Genic enhancers Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs373851682	chr7:137006042-137006043	Weak transcription Genic enhancers Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs550347204	chr7:137006113-137006114	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs142974689	chr7:137006116-137006117	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs185686958	chr7:137006159-137006160	Weak transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs117586290	chr7:137006208-137006209	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs146124755	chr7:137006272-137006273	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs115520791	chr7:137006306-137006307	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs535223752	chr7:137006316-137006317	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs140109832	chr7:137006442-137006443	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs377512777	chr7:137006446-137006447	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs190547050	chr7:137006539-137006540	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs143710551	chr7:137006582-137006583	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs575022213	chr7:137006589-137006590	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs534263196	chr7:137006622-137006623	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs540154314	chr7:137006623-137006624	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs181746261	chr7:137006634-137006635	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs553674819	chr7:137006689-137006690	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs568282917	chr7:137006747-137006748	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs146807235	chr7:137006755-137006756	Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs35353741	chr7:137006812-137006813	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs542020252	chr7:137006829-137006830	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs553899542	chr7:137006833-137006834	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs140485957	chr7:137006834-137006835	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs73730312	chr7:137006835-137006836	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs544277828	chr7:137006864-137006865	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs577122595	chr7:137006869-137006870	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs563752565	chr7:137006884-137006885	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs541376410	chr7:137006926-137006927	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs532736652	chr7:137006928-137006929	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs546490321	chr7:137006939-137006940	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs10251438	chr7:137006969-137006970	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs575510683	chr7:137006981-137006982	Weak transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs186053248	chr7:137007104-137007105	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
lymphocytic leukemia	21291569	CNVD
Acute myeloid leukemia	21251322	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Melanoma	19188590	CNVD
Glioblastoma multiforme	18628472	CNVD
abnormal development	18461090	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Malignant melanoma	17260012	CNVD
Coffin-Siris syndrome	21572526	CNVD
Papillary thyroid carcinoma	21436994	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Hodgkin''s lymphoma	18179710	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Low-grade fibromyxoid sarcoma	21536545	CNVD
Breast cancer	16272173	CNVD
Myxofibrosarcoma	16751306	CNVD
Stuttering	21108403	CNVD
Breast cancer	17603634	CNVD
Urothelial carcinoma	18382360	CNVD
Neuroticism	17667963	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute myeloid leukemia	17237825	CNVD
Esophageal cancer	21851588	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	21990379	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:788 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136982800-137008400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:136991600-137013000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:136993200-137007000	Genic enhancers	Cortex derived primary cultured neurospheres	brain
4	chr7:136998200-137010200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr7:136998200-137013000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr7:137001800-137016200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr7:137002000-137010400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr7:137002000-137013000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr7:137002000-137020000	Weak transcription	Fetal Stomach	stomach
10	chr7:137002200-137010000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:137002800-137010000	Weak transcription	Brain Cingulate Gyrus	brain
12	chr7:137003800-137006800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr7:137003800-137009800	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr7:137004600-137009600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr7:137004800-137016200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr7:137005400-137006000	Enhancers	Brain Anterior Caudate	brain
17	chr7:137005600-137006000	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr7:137005600-137006000	Enhancers	Brain Angular Gyrus	brain
19	chr7:137005600-137006000	Enhancers	Brain Substantia Nigra	brain
20	chr7:137005600-137007600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr7:137005800-137006200	Enhancers	Brain Hippocampus Middle	brain
22	chr7:137005800-137006200	Enhancers	Brain Inferior Temporal Lobe	brain
23	chr7:137006000-137009000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr7:137006000-137009400	Weak transcription	Brain Substantia Nigra	brain
25	chr7:137006000-137010400	Weak transcription	Brain Angular Gyrus	brain
26	chr7:137006000-137011200	Weak transcription	Brain Anterior Caudate	brain
27	chr7:137006800-137009000	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr7:137007000-137007600	Weak transcription	Cortex derived primary cultured neurospheres	brain
29	chr7:137007600-137008000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
30	chr7:137007600-137008600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
31	chr7:137007600-137009600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
32	chr7:137008000-137010000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr7:137008000-137013000	Weak transcription	NH-A	brain
34	chr7:137008600-137010400	Strong transcription	Cortex derived primary cultured neurospheres	brain
35	chr7:137009000-137011000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
36	chr7:137009000-137011200	Enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr7:137009400-137010000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr7:137009400-137014600	Enhancers	Brain Substantia Nigra	brain
39	chr7:137009600-137010400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr7:137009600-137010600	Enhancers	HUES48 Cell Line	embryonic stem cell
41	chr7:137009600-137011000	Enhancers	HUES64 Cell Line	embryonic stem cell
42	chr7:137009600-137011000	Enhancers	iPS-18 Cell Line	embryonic stem cell
43	chr7:137009600-137011200	Enhancers	iPS-15b Cell Line	embryonic stem cell
44	chr7:137009800-137010600	Enhancers	H1 Cell Line	embryonic stem cell
45	chr7:137009800-137011200	Enhancers	HUES6 Cell Line	embryonic stem cell
46	chr7:137010000-137010400	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr7:137010000-137010800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
48	chr7:137010000-137012000	Enhancers	iPS-20b Cell Line	embryonic stem cell
49	chr7:137010000-137014200	Enhancers	Brain Cingulate Gyrus	brain
50	chr7:137010200-137010600	Enhancers	H9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links